RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 POLR2MP0CAP2 368 aa4.2□□□□□ -1.74
TRA2B-201ENST00000259043 SMIM18P0DKX4 95 aa4.2□□□□□ -1.74
TRA2B-201ENST00000259043 C8orf89P0DMQ9 161 aa4.2□□□□□ -1.74
TRA2B-201ENST00000259043 UROSP10746 265 aa4.2□□□□□ -1.74
TRA2B-201ENST00000259043 HAPLN1P10915 354 aaPredicted RBP4.2□□□□□ -1.74
TRA2B-201ENST00000259043 CEACAM8P31997 349 aaPredicted RBP4.2□□□□□ -1.74
TRA2B-201ENST00000259043 MTCP1P56278 107 aa4.2□□□□□ -1.74
TRA2B-201ENST00000259043 LGALS3BPQ08380 585 aa4.2□□□□□ -1.74
TRA2B-201ENST00000259043 ILF2Q12905 390 aaKnown RBP4.2□□□□□ -1.74
TRA2B-201ENST00000259043 HTR4Q13639 388 aa4.2□□□□□ -1.74
TRA2B-201ENST00000259043 PTPN14Q15678 1187 aa4.2□□□□□ -1.74
TRA2B-201ENST00000259043 ECHDC2Q86YB7 292 aa4.2□□□□□ -1.74
TRA2B-201ENST00000259043 SIAH3Q8IW03 269 aa4.2□□□□□ -1.74
TRA2B-201ENST00000259043 RASGEF1AQ8N9B8 481 aa4.2□□□□□ -1.74
TRA2B-201ENST00000259043 ZNF383Q8NA42 475 aa4.2□□□□□ -1.74
TRA2B-201ENST00000259043 NCOA7Q8NI08 942 aa4.2□□□□□ -1.74
TRA2B-201ENST00000259043 CLDN23Q96B33 292 aa4.2□□□□□ -1.74
TRA2B-201ENST00000259043 CENPTQ96BT3 561 aa4.2□□□□□ -1.74
TRA2B-201ENST00000259043 ZNF707Q96C28 371 aaPredicted RBP4.2□□□□□ -1.74
TRA2B-201ENST00000259043 GIMAP5Q96F15 307 aa4.2□□□□□ -1.74
TRA2B-201ENST00000259043 PDLIM5Q96HC4 596 aaKnown RBP4.2□□□□□ -1.74
TRA2B-201ENST00000259043 WDR13Q9H1Z4 485 aa4.2□□□□□ -1.74
TRA2B-201ENST00000259043 DCTPP1Q9H773 170 aa4.2□□□□□ -1.74
TRA2B-201ENST00000259043 DNAJC4Q9NNZ3 241 aa4.2□□□□□ -1.74
TRA2B-201ENST00000259043 IARS2Q9NSE4 1012 aaKnown RBP4.2□□□□□ -1.74
TRA2B-201ENST00000259043 ZDHHC18Q9NUE0 388 aa4.2□□□□□ -1.74
TRA2B-201ENST00000259043 ATAD3AQ9NVI7 634 aa4.2□□□□□ -1.74
TRA2B-201ENST00000259043 INTS10Q9NVR2 710 aaKnown RBP4.2□□□□□ -1.74
TRA2B-201ENST00000259043 SLCO1C1Q9NYB5 712 aa4.2□□□□□ -1.74
TRA2B-201ENST00000259043 RAB23Q9ULC3 237 aa4.2□□□□□ -1.74
TRA2B-201ENST00000259043 SLC7A7Q9UM01 511 aa4.2□□□□□ -1.74
TRA2B-201ENST00000259043 UBIAD1Q9Y5Z9 338 aa4.2□□□□□ -1.74
TRA2B-201ENST00000259043 TDRD15B5MCY1 1934 aaKnown RBP4.2□□□□□ -1.74
TRA2B-201ENST00000259043 TICRRQ7Z2Z1 1910 aa4.2□□□□□ -1.74
TRA2B-201ENST00000259043 CLUHO75153 1309 aa4.2□□□□□ -1.74
TRA2B-201ENST00000259043 F5P12259 2224 aa4.19□□□□□ -1.74
TRA2B-201ENST00000259043 COL4A2P08572 1712 aa4.19□□□□□ -1.74
TRA2B-201ENST00000259043 IGKV6D-21A0A0A0MT36 114 aa4.19□□□□□ -1.74
TRA2B-201ENST00000259043 C13orf42A0A1B0GVH6 325 aa4.19□□□□□ -1.74
TRA2B-201ENST00000259043 GTPBP10A4D1E9 387 aaKnown RBP4.19□□□□□ -1.74
TRA2B-201ENST00000259043 E9PI62 339 aa4.19□□□□□ -1.74
TRA2B-201ENST00000259043 PGRMC2O15173 223 aa4.19□□□□□ -1.74
TRA2B-201ENST00000259043 ST8SIA3O43173 380 aa4.19□□□□□ -1.74
TRA2B-201ENST00000259043 ARHGEF9O43307 516 aa4.19□□□□□ -1.74
TRA2B-201ENST00000259043 AP2A2O94973 939 aa4.19□□□□□ -1.74
TRA2B-201ENST00000259043 MNDAP41218 407 aa4.19□□□□□ -1.74
TRA2B-201ENST00000259043 MAGEA9P43362 315 aa4.19□□□□□ -1.74
TRA2B-201ENST00000259043 RPL21P46778 160 aaKnown RBP4.19□□□□□ -1.74
TRA2B-201ENST00000259043 KCNJ1P48048 391 aa4.19□□□□□ -1.74
TRA2B-201ENST00000259043 NPBWR1P48145 328 aa4.19□□□□□ -1.74
TRA2B-201ENST00000259043 CDH11P55287 796 aa4.19□□□□□ -1.74
TRA2B-201ENST00000259043 KIAA1024LP59773 190 aa4.19□□□□□ -1.74
TRA2B-201ENST00000259043 KLC1Q07866 573 aa4.19□□□□□ -1.74
TRA2B-201ENST00000259043 NPRL3Q12980 569 aa4.19□□□□□ -1.74
TRA2B-201ENST00000259043 CBX3Q13185 183 aa4.19□□□□□ -1.74
TRA2B-201ENST00000259043 GIT2Q14161 759 aa4.19□□□□□ -1.74
TRA2B-201ENST00000259043 GTDC1Q4AE62 458 aa4.19□□□□□ -1.74
TRA2B-201ENST00000259043 LACTB2Q53H82 288 aaPredicted RBP4.19□□□□□ -1.74
TRA2B-201ENST00000259043 BHLHB9Q6PI77 547 aa4.19□□□□□ -1.74
TRA2B-201ENST00000259043 TMEM270Q6UE05 265 aa4.19□□□□□ -1.74
TRA2B-201ENST00000259043 KCTD9Q7L273 389 aa4.19□□□□□ -1.74
TRA2B-201ENST00000259043 NDUFAF2Q8N183 169 aa4.19□□□□□ -1.74
TRA2B-201ENST00000259043 NPEPL1Q8NDH3 523 aa4.19□□□□□ -1.74
TRA2B-201ENST00000259043 OR13J1Q8NGT2 312 aa4.19□□□□□ -1.74
TRA2B-201ENST00000259043 GRHL3Q8TE85 626 aa4.19□□□□□ -1.74
TRA2B-201ENST00000259043 IRGQQ8WZA9 623 aa4.19□□□□□ -1.74
TRA2B-201ENST00000259043 FGF14Q92915 247 aa4.19□□□□□ -1.74
TRA2B-201ENST00000259043 SNX21Q969T3 373 aa4.19□□□□□ -1.74
TRA2B-201ENST00000259043 GMPPAQ96IJ6 420 aaPredicted RBP4.19□□□□□ -1.74
TRA2B-201ENST00000259043 LINC00479Q96M42 142 aa4.19□□□□□ -1.74
TRA2B-201ENST00000259043 ATP6V0BQ99437 205 aa4.19□□□□□ -1.74
TRA2B-201ENST00000259043 LSG1Q9H089 658 aaKnown RBP4.19□□□□□ -1.74
TRA2B-201ENST00000259043 ARRDC1-AS1Q9H2J1 176 aa4.19□□□□□ -1.74
TRA2B-201ENST00000259043 COMMD8Q9NX08 183 aa4.19□□□□□ -1.74
TRA2B-201ENST00000259043 GINS2Q9Y248 185 aa4.19□□□□□ -1.74
TRA2B-201ENST00000259043 HECTD1Q9ULT8 2610 aa4.19□□□□□ -1.74
TRA2B-201ENST00000259043 TTC41PQ6P2S7 1318 aa4.19□□□□□ -1.74
TRA2B-201ENST00000259043 EML5Q05BV3 1969 aa4.18□□□□□ -1.74
TRA2B-201ENST00000259043 NUP205Q92621 2012 aa4.18□□□□□ -1.74
TRA2B-201ENST00000259043 SLCO1B7G3V0H7 640 aa4.18□□□□□ -1.74
TRA2B-201ENST00000259043 FLRT2O43155 660 aa4.18□□□□□ -1.74
TRA2B-201ENST00000259043 ZBTB14O43829 449 aa4.18□□□□□ -1.74
TRA2B-201ENST00000259043 SNX3O60493 162 aa4.18□□□□□ -1.74
TRA2B-201ENST00000259043 TRMUO75648 421 aaKnown RBP4.18□□□□□ -1.74
TRA2B-201ENST00000259043 DDHD2O94830 711 aa4.18□□□□□ -1.74
TRA2B-201ENST00000259043 SLC16A8O95907 504 aa4.18□□□□□ -1.74
TRA2B-201ENST00000259043 GSRP00390 522 aa4.18□□□□□ -1.74
TRA2B-201ENST00000259043 VTNP04004 478 aa4.18□□□□□ -1.74
TRA2B-201ENST00000259043 RETP07949 1114 aa4.18□□□□□ -1.74
TRA2B-201ENST00000259043 PCP11498 1178 aaKnown RBP4.18□□□□□ -1.74
TRA2B-201ENST00000259043 MX1P20591 662 aa4.18□□□□□ -1.74
TRA2B-201ENST00000259043 CDX1P47902 265 aaPredicted RBP4.18□□□□□ -1.74
TRA2B-201ENST00000259043 SLC11A1P49279 550 aa4.18□□□□□ -1.74
TRA2B-201ENST00000259043 CRYBB1P53674 252 aaPredicted RBP4.18□□□□□ -1.74
TRA2B-201ENST00000259043 SULT2A1Q06520 285 aa4.18□□□□□ -1.74
TRA2B-201ENST00000259043 C17orf67Q0P5P2 114 aa4.18□□□□□ -1.74
TRA2B-201ENST00000259043 SRSF5Q13243 272 aaKnown RBP4.18□□□□□ -1.74
TRA2B-201ENST00000259043 ITGB3BPQ13352 177 aaPredicted RBP4.18□□□□□ -1.74
TRA2B-201ENST00000259043 MLF2Q15773 248 aaPredicted RBP4.18□□□□□ -1.74
TRA2B-201ENST00000259043 CA9Q16790 459 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms