RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 EPYCQ99645 322 aa26.1■■□□□ 1.77
CCM2-201ENST00000258781 SERHL2Q9H4I8 314 aa26.1■■□□□ 1.77
CCM2-201ENST00000258781 UCK1Q9HA47 277 aa26.1■■□□□ 1.77
CCM2-201ENST00000258781 FAM118AQ9NWS6 357 aa26.1■■□□□ 1.77
CCM2-201ENST00000258781 TMEFF2Q9UIK5 374 aaPredicted RBP26.1■■□□□ 1.77
CCM2-201ENST00000258781 CABIN1Q9Y6J0 2220 aa26.1■■□□□ 1.77
CCM2-201ENST00000258781 PGM3O95394 542 aa26.09■■□□□ 1.77
CCM2-201ENST00000258781 MPIP34949 423 aa26.09■■□□□ 1.77
CCM2-201ENST00000258781 FASLGP48023 281 aa26.09■■□□□ 1.77
CCM2-201ENST00000258781 C21orf59P57076 290 aa26.09■■□□□ 1.77
CCM2-201ENST00000258781 SIM2Q14190 667 aaPredicted RBP26.09■■□□□ 1.77
CCM2-201ENST00000258781 ZNF761Q86XN6 746 aaPredicted RBP26.09■■□□□ 1.77
CCM2-201ENST00000258781 ZNF555Q8NEP9 628 aa26.09■■□□□ 1.77
CCM2-201ENST00000258781 KLHL6Q8WZ60 621 aa26.09■■□□□ 1.77
CCM2-201ENST00000258781 ZNF681Q96N22 645 aa26.09■■□□□ 1.77
CCM2-201ENST00000258781 SEMA6CQ9H3T2 930 aa26.09■■□□□ 1.77
CCM2-201ENST00000258781 KCMF1Q9P0J7 381 aa26.09■■□□□ 1.77
CCM2-201ENST00000258781 RAB23Q9ULC3 237 aa26.09■■□□□ 1.77
CCM2-201ENST00000258781 ZNF780BQ9Y6R6 833 aa26.09■■□□□ 1.77
CCM2-201ENST00000258781 KMT2EQ8IZD2 1858 aa26.09■■□□□ 1.77
CCM2-201ENST00000258781 WDR87Q6ZQQ6 2873 aa26.09■■□□□ 1.77
CCM2-201ENST00000258781 PDE9AO76083 593 aa26.08■■□□□ 1.77
CCM2-201ENST00000258781 TFAP2AP05549 437 aa26.08■■□□□ 1.77
CCM2-201ENST00000258781 BCHEP06276 602 aa26.08■■□□□ 1.77
CCM2-201ENST00000258781 KHKP50053 298 aa26.08■■□□□ 1.77
CCM2-201ENST00000258781 ANXA11P50995 505 aaKnown RBP26.08■■□□□ 1.77
CCM2-201ENST00000258781 KLHL35Q6PF15 583 aa26.08■■□□□ 1.77
CCM2-201ENST00000258781 C11orf74Q86VG3 221 aa26.08■■□□□ 1.77
CCM2-201ENST00000258781 ZNF786Q8N393 782 aa26.08■■□□□ 1.77
CCM2-201ENST00000258781 OR56A1Q8NGH5 318 aa26.08■■□□□ 1.77
CCM2-201ENST00000258781 TMEM19Q96HH6 336 aa26.08■■□□□ 1.77
CCM2-201ENST00000258781 C10orf90Q96M02 699 aa26.08■■□□□ 1.77
CCM2-201ENST00000258781 YTHDF1Q9BYJ9 559 aaKnown RBP26.08■■□□□ 1.77
CCM2-201ENST00000258781 MS4A12Q9NXJ0 267 aa26.08■■□□□ 1.77
CCM2-201ENST00000258781 NDUFAF4Q9P032 175 aa26.08■■□□□ 1.77
CCM2-201ENST00000258781 PCDHGB3Q9Y5G1 929 aa26.08■■□□□ 1.77
CCM2-201ENST00000258781 TMEM247A6NEH6 219 aa26.08■■□□□ 1.77
CCM2-201ENST00000258781 C9P02748 559 aa26.08■■□□□ 1.77
CCM2-201ENST00000258781 ITGA2P17301 1181 aa26.08■■□□□ 1.77
CCM2-201ENST00000258781 ALOX12P18054 663 aa26.08■■□□□ 1.77
CCM2-201ENST00000258781 CPN2P22792 545 aa26.08■■□□□ 1.77
CCM2-201ENST00000258781 AVPR2P30518 371 aa26.08■■□□□ 1.77
CCM2-201ENST00000258781 DUSP2Q05923 314 aa26.08■■□□□ 1.77
CCM2-201ENST00000258781 DEFB134Q4QY38 66 aa26.08■■□□□ 1.77
CCM2-201ENST00000258781 FOXB2Q5VYV0 432 aa26.08■■□□□ 1.77
CCM2-201ENST00000258781 BMP8AQ7Z5Y6 402 aa26.08■■□□□ 1.77
CCM2-201ENST00000258781 TSEN54Q7Z6J9 526 aaKnown RBP26.08■■□□□ 1.77
CCM2-201ENST00000258781 CCDC116Q8IYX3 515 aa26.08■■□□□ 1.77
CCM2-201ENST00000258781 SAMD14Q8IZD0 417 aaPredicted RBP26.08■■□□□ 1.77
CCM2-201ENST00000258781 LMX1AQ8TE12 382 aa26.08■■□□□ 1.77
CCM2-201ENST00000258781 RAB8BQ92930 207 aa26.08■■□□□ 1.77
CCM2-201ENST00000258781 RUBCNLQ9H714 662 aa26.08■■□□□ 1.77
CCM2-201ENST00000258781 P2RX2Q9UBL9 471 aa26.08■■□□□ 1.77
CCM2-201ENST00000258781 PILRBQ9UKJ0 227 aa26.08■■□□□ 1.77
CCM2-201ENST00000258781 ADAMDEC1O15204 470 aa26.07■■□□□ 1.76
CCM2-201ENST00000258781 SDC3O75056 442 aa26.07■■□□□ 1.76
CCM2-201ENST00000258781 FHP07954 510 aa26.07■■□□□ 1.76
CCM2-201ENST00000258781 IGFBP5P24593 272 aa26.07■■□□□ 1.76
CCM2-201ENST00000258781 FEN1P39748 380 aaKnown RBP26.07■■□□□ 1.76
CCM2-201ENST00000258781 MAZP56270 477 aaKnown RBP26.07■■□□□ 1.76
CCM2-201ENST00000258781 SNRPNP63162 240 aaKnown RBP26.07■■□□□ 1.76
CCM2-201ENST00000258781 BNC1Q01954 994 aa26.07■■□□□ 1.76
CCM2-201ENST00000258781 ANKRD34AQ69YU3 496 aa26.07■■□□□ 1.76
CCM2-201ENST00000258781 AMBRA1Q9C0C7 1298 aa26.07■■□□□ 1.76
CCM2-201ENST00000258781 OR51I1Q9H343 314 aa26.07■■□□□ 1.76
CCM2-201ENST00000258781 CXorf56Q9H5V9 222 aa26.07■■□□□ 1.76
CCM2-201ENST00000258781 LYRM4Q9HD34 91 aa26.07■■□□□ 1.76
CCM2-201ENST00000258781 DNAAF2Q9NVR5 837 aaKnown RBP26.07■■□□□ 1.76
CCM2-201ENST00000258781 DAPP1Q9UN19 280 aa26.07■■□□□ 1.76
CCM2-201ENST00000258781 DOLKQ9UPQ8 538 aa26.07■■□□□ 1.76
CCM2-201ENST00000258781 A0A1B0GTW7 788 aa26.06■■□□□ 1.76
CCM2-201ENST00000258781 TRIM64A6NGJ6 449 aa26.06■■□□□ 1.76
CCM2-201ENST00000258781 PRAMEF10O60809 474 aa26.06■■□□□ 1.76
CCM2-201ENST00000258781 PABPC4LP0CB38 370 aaKnown RBP26.06■■□□□ 1.76
CCM2-201ENST00000258781 TYRP1P17643 537 aa26.06■■□□□ 1.76
CCM2-201ENST00000258781 LIM2P55344 173 aa26.06■■□□□ 1.76
CCM2-201ENST00000258781 PPP1CAP62136 330 aa26.06■■□□□ 1.76
CCM2-201ENST00000258781 KCNAB2Q13303 367 aa26.06■■□□□ 1.76
CCM2-201ENST00000258781 MAPK11Q15759 364 aa26.06■■□□□ 1.76
CCM2-201ENST00000258781 ZNF750Q32MQ0 723 aa26.06■■□□□ 1.76
CCM2-201ENST00000258781 SZRD1Q7Z422 152 aa26.06■■□□□ 1.76
CCM2-201ENST00000258781 ARL14Q8N4G2 192 aa26.06■■□□□ 1.76
CCM2-201ENST00000258781 MIPOL1Q8TD10 442 aa26.06■■□□□ 1.76
CCM2-201ENST00000258781 MUS81Q96NY9 551 aa26.06■■□□□ 1.76
CCM2-201ENST00000258781 BARD1Q99728 777 aaKnown RBP26.06■■□□□ 1.76
CCM2-201ENST00000258781 EPB41L1Q9H4G0 881 aa26.06■■□□□ 1.76
CCM2-201ENST00000258781 NDUFA13Q9P0J0 144 aa26.06■■□□□ 1.76
CCM2-201ENST00000258781 C8orf89P0DMQ9 161 aa26.06■■□□□ 1.76
CCM2-201ENST00000258781 ATP6V1B1P15313 513 aa26.06■■□□□ 1.76
CCM2-201ENST00000258781 MATN1P21941 496 aa26.06■■□□□ 1.76
CCM2-201ENST00000258781 TLX1P31314 330 aaPredicted RBP26.06■■□□□ 1.76
CCM2-201ENST00000258781 HNRNPKP61978 463 aaKnown RBP eCLIP26.06■■□□□ 1.76
CCM2-201ENST00000258781 TUBA4AP68366 448 aa26.06■■□□□ 1.76
CCM2-201ENST00000258781 PRR5P85299 388 aa26.06■■□□□ 1.76
CCM2-201ENST00000258781 RUNX2Q13950 521 aa26.06■■□□□ 1.76
CCM2-201ENST00000258781 KDM4DQ6B0I6 523 aa26.06■■□□□ 1.76
CCM2-201ENST00000258781 SDR16C5Q8N3Y7 309 aa26.06■■□□□ 1.76
CCM2-201ENST00000258781 ZNF300Q96RE9 604 aaPredicted RBP26.06■■□□□ 1.76
CCM2-201ENST00000258781 PDP1Q9P0J1 537 aaPredicted RBP26.06■■□□□ 1.76
CCM2-201ENST00000258781 LILRA5A6NI73 299 aa26.05■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms