RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 FKBP7Q9Y680 259 aa10.94□□□□□ -0.66
TROAP-201ENST00000257909 RPS10-NUDT3A0A1W2PQS6 291 aa10.94□□□□□ -0.66
TROAP-201ENST00000257909 C7orf66A4D0T2 115 aa10.94□□□□□ -0.66
TROAP-201ENST00000257909 FFAR1O14842 300 aa10.94□□□□□ -0.66
TROAP-201ENST00000257909 TLX2O43763 284 aaPredicted RBP10.94□□□□□ -0.66
TROAP-201ENST00000257909 SH3BP5O60239 455 aa10.94□□□□□ -0.66
TROAP-201ENST00000257909 SOD1P00441 154 aa10.94□□□□□ -0.66
TROAP-201ENST00000257909 OR56A5P0C7T3 313 aa10.94□□□□□ -0.66
TROAP-201ENST00000257909 MPC1LP0DKB6 136 aa10.94□□□□□ -0.66
TROAP-201ENST00000257909 ARAFP10398 606 aa10.94□□□□□ -0.66
TROAP-201ENST00000257909 RHOAP61586 193 aa10.94□□□□□ -0.66
TROAP-201ENST00000257909 CYP4F8P98187 520 aa10.94□□□□□ -0.66
TROAP-201ENST00000257909 HSF2Q03933 536 aa10.94□□□□□ -0.66
TROAP-201ENST00000257909 CCDC85BQ15834 202 aaPredicted RBP10.94□□□□□ -0.66
TROAP-201ENST00000257909 SNAPC1Q16533 368 aa10.94□□□□□ -0.66
TROAP-201ENST00000257909 PLA1AQ53H76 456 aa10.94□□□□□ -0.66
TROAP-201ENST00000257909 LINGO4Q6UY18 593 aa10.94□□□□□ -0.66
TROAP-201ENST00000257909 BCDIN3DQ7Z5W3 292 aaKnown RBP10.94□□□□□ -0.66
TROAP-201ENST00000257909 GPAT4Q86UL3 456 aa10.94□□□□□ -0.66
TROAP-201ENST00000257909 ADGRF3Q8IZF5 1079 aa10.94□□□□□ -0.66
TROAP-201ENST00000257909 CBARPQ8N350 705 aaPredicted RBP10.94□□□□□ -0.66
TROAP-201ENST00000257909 ZSWIM3Q96MP5 696 aa10.94□□□□□ -0.66
TROAP-201ENST00000257909 ZNF578Q96N58 590 aaPredicted RBP10.94□□□□□ -0.66
TROAP-201ENST00000257909 TM9SF2Q99805 663 aa10.94□□□□□ -0.66
TROAP-201ENST00000257909 HDHD2Q9H0R4 259 aa10.94□□□□□ -0.66
TROAP-201ENST00000257909 TVP23BQ9NYZ1 205 aa10.94□□□□□ -0.66
TROAP-201ENST00000257909 DNMT3AQ9Y6K1 912 aaPredicted RBP10.94□□□□□ -0.66
TROAP-201ENST00000257909 A0A0U1RQF3 1178 aa10.93□□□□□ -0.66
TROAP-201ENST00000257909 GNG14A0A1W2PPG7 69 aa10.93□□□□□ -0.66
TROAP-201ENST00000257909 H0YIV9 168 aa10.93□□□□□ -0.66
TROAP-201ENST00000257909 C6orf47O95873 294 aa10.93□□□□□ -0.66
TROAP-201ENST00000257909 IGFBP1P08833 259 aaPredicted RBP10.93□□□□□ -0.66
TROAP-201ENST00000257909 CD22P20273 847 aa10.93□□□□□ -0.66
TROAP-201ENST00000257909 DDCP20711 480 aa10.93□□□□□ -0.66
TROAP-201ENST00000257909 CHI3L1P36222 383 aaPredicted RBP10.93□□□□□ -0.66
TROAP-201ENST00000257909 AVPR1BP47901 424 aa10.93□□□□□ -0.66
TROAP-201ENST00000257909 LIM2P55344 173 aa10.93□□□□□ -0.66
TROAP-201ENST00000257909 PFN3P60673 137 aa10.93□□□□□ -0.66
TROAP-201ENST00000257909 ALDH6A1Q02252 535 aaKnown RBP10.93□□□□□ -0.66
TROAP-201ENST00000257909 RAB40BQ12829 278 aa10.93□□□□□ -0.66
TROAP-201ENST00000257909 GPR176Q14439 515 aa10.93□□□□□ -0.66
TROAP-201ENST00000257909 SYT14P1Q58G82 188 aa10.93□□□□□ -0.66
TROAP-201ENST00000257909 GARNL3Q5VVW2 1013 aa10.93□□□□□ -0.66
TROAP-201ENST00000257909 CD276Q5ZPR3 534 aa10.93□□□□□ -0.66
TROAP-201ENST00000257909 USP45Q70EL2 814 aa10.93□□□□□ -0.66
TROAP-201ENST00000257909 WDR53Q7Z5U6 358 aaPredicted RBP10.93□□□□□ -0.66
TROAP-201ENST00000257909 ZNF655Q8N720 491 aaPredicted RBP10.93□□□□□ -0.66
TROAP-201ENST00000257909 FBXO22Q8NEZ5 403 aa10.93□□□□□ -0.66
TROAP-201ENST00000257909 CHFRQ96EP1 664 aa10.93□□□□□ -0.66
TROAP-201ENST00000257909 SCMH1Q96GD3 660 aa10.93□□□□□ -0.66
TROAP-201ENST00000257909 REEP4Q9H6H4 257 aa10.93□□□□□ -0.66
TROAP-201ENST00000257909 GPBP1L1Q9HC44 474 aaPredicted RBP10.93□□□□□ -0.66
TROAP-201ENST00000257909 NMRK2Q9NPI5 230 aa10.93□□□□□ -0.66
TROAP-201ENST00000257909 MRPS18AQ9NVS2 196 aaKnown RBP10.93□□□□□ -0.66
TROAP-201ENST00000257909 RWDD3Q9Y3V2 267 aa10.93□□□□□ -0.66
TROAP-201ENST00000257909 CCDC88CQ9P219 2028 aa10.93□□□□□ -0.66
TROAP-201ENST00000257909 AGAP14A8MT82 685 aa10.93□□□□□ -0.66
TROAP-201ENST00000257909 ATP6V1G2-DDX39BF2Z307 99 aa10.93□□□□□ -0.66
TROAP-201ENST00000257909 CLDN7O95471 211 aa10.93□□□□□ -0.66
TROAP-201ENST00000257909 RECKO95980 971 aa10.93□□□□□ -0.66
TROAP-201ENST00000257909 CTSHP09668 335 aa10.93□□□□□ -0.66
TROAP-201ENST00000257909 ELAVL4P26378 380 aaKnown RBP10.93□□□□□ -0.66
TROAP-201ENST00000257909 TIA1P31483 386 aaKnown RBP eCLIP10.93□□□□□ -0.66
TROAP-201ENST00000257909 DGKGP49619 791 aa10.93□□□□□ -0.66
TROAP-201ENST00000257909 ACLYP53396 1101 aa10.93□□□□□ -0.66
TROAP-201ENST00000257909 AP1S1P61966 158 aa10.93□□□□□ -0.66
TROAP-201ENST00000257909 RPA4Q13156 261 aa10.93□□□□□ -0.66
TROAP-201ENST00000257909 IRF5Q13568 498 aa10.93□□□□□ -0.66
TROAP-201ENST00000257909 EXOSC2Q13868 293 aaKnown RBP10.93□□□□□ -0.66
TROAP-201ENST00000257909 FGFBP1Q14512 234 aa10.93□□□□□ -0.66
TROAP-201ENST00000257909 ZNF385BQ569K4 471 aa10.93□□□□□ -0.66
TROAP-201ENST00000257909 BCL2L15Q5TBC7 163 aa10.93□□□□□ -0.66
TROAP-201ENST00000257909 OR2G6Q5TZ20 316 aa10.93□□□□□ -0.66
TROAP-201ENST00000257909 GRHL2Q6ISB3 625 aa10.93□□□□□ -0.66
TROAP-201ENST00000257909 ADGRD2Q7Z7M1 963 aa10.93□□□□□ -0.66
TROAP-201ENST00000257909 TTC9BQ8N6N2 239 aa10.93□□□□□ -0.66
TROAP-201ENST00000257909 DNAJC5GQ8N7S2 189 aa10.93□□□□□ -0.66
TROAP-201ENST00000257909 ATAD1Q8NBU5 361 aa10.93□□□□□ -0.66
TROAP-201ENST00000257909 OR4K1Q8NGD4 311 aa10.93□□□□□ -0.66
TROAP-201ENST00000257909 GATAD2BQ8WXI9 593 aa10.93□□□□□ -0.66
TROAP-201ENST00000257909 ACOT12Q8WYK0 555 aa10.93□□□□□ -0.66
TROAP-201ENST00000257909 HGDQ93099 445 aa10.93□□□□□ -0.66
TROAP-201ENST00000257909 RADILQ96JH8 1075 aa10.93□□□□□ -0.66
TROAP-201ENST00000257909 P2RY13Q9BPV8 354 aa10.93□□□□□ -0.66
TROAP-201ENST00000257909 WRAP53Q9BUR4 548 aaKnown RBP10.93□□□□□ -0.66
TROAP-201ENST00000257909 ATG10Q9H0Y0 220 aa10.93□□□□□ -0.66
TROAP-201ENST00000257909 GHITMQ9H3K2 345 aa10.93□□□□□ -0.66
TROAP-201ENST00000257909 FGF20Q9NP95 211 aaPredicted RBP10.93□□□□□ -0.66
TROAP-201ENST00000257909 ZDHHC3Q9NYG2 299 aa10.93□□□□□ -0.66
TROAP-201ENST00000257909 SRRDQ9UH36 339 aa10.93□□□□□ -0.66
TROAP-201ENST00000257909 EXOSC1Q9Y3B2 195 aaKnown RBP10.93□□□□□ -0.66
TROAP-201ENST00000257909 MAP4K5Q9Y4K4 846 aa10.93□□□□□ -0.66
TROAP-201ENST00000257909 GFYI3L273 518 aa10.92□□□□□ -0.66
TROAP-201ENST00000257909 TSPAN4O14817 238 aa10.92□□□□□ -0.66
TROAP-201ENST00000257909 PRKYO43930 277 aa10.92□□□□□ -0.66
TROAP-201ENST00000257909 HOXD4P09016 255 aaPredicted RBP10.92□□□□□ -0.66
TROAP-201ENST00000257909 ZDHHC11BP0C7U3 371 aa10.92□□□□□ -0.66
TROAP-201ENST00000257909 WEE1P30291 646 aa10.92□□□□□ -0.66
TROAP-201ENST00000257909 RPL3P39023 403 aaKnown RBP10.92□□□□□ -0.66
TROAP-201ENST00000257909 CCT3P49368 545 aaKnown RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms