RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 VIRMAQ69YN4 1812 aaKnown RBP12.77□□□□□ -0.36
PRPF38A-201ENST00000257181 ZNF879B4DU55 563 aa12.77□□□□□ -0.36
PRPF38A-201ENST00000257181 GPR171O14626 319 aa12.77□□□□□ -0.36
PRPF38A-201ENST00000257181 PSIP1O75475 530 aaKnown RBP12.77□□□□□ -0.36
PRPF38A-201ENST00000257181 FAM155BO75949 473 aa12.77□□□□□ -0.36
PRPF38A-201ENST00000257181 CLPTM1O96005 669 aa12.77□□□□□ -0.36
PRPF38A-201ENST00000257181 GRK5P34947 590 aa12.77□□□□□ -0.36
PRPF38A-201ENST00000257181 APLNRP35414 380 aa12.77□□□□□ -0.36
PRPF38A-201ENST00000257181 KIR2DL3P43628 341 aa12.77□□□□□ -0.36
PRPF38A-201ENST00000257181 IL11RAQ14626 422 aa12.77□□□□□ -0.36
PRPF38A-201ENST00000257181 ARL6IP1Q15041 203 aa12.77□□□□□ -0.36
PRPF38A-201ENST00000257181 AGAP7PQ5VUJ5 663 aa12.77□□□□□ -0.36
PRPF38A-201ENST00000257181 PAQR9Q6ZVX9 377 aa12.77□□□□□ -0.36
PRPF38A-201ENST00000257181 SSX8Q7RTT4 187 aa12.77□□□□□ -0.36
PRPF38A-201ENST00000257181 TMEM17Q86X19 198 aa12.77□□□□□ -0.36
PRPF38A-201ENST00000257181 KCT2Q8NC54 265 aa12.77□□□□□ -0.36
PRPF38A-201ENST00000257181 OR13H1Q8NG92 308 aa12.77□□□□□ -0.36
PRPF38A-201ENST00000257181 C1orf216Q8TAB5 229 aa12.77□□□□□ -0.36
PRPF38A-201ENST00000257181 UBTD2Q8WUN7 234 aa12.77□□□□□ -0.36
PRPF38A-201ENST00000257181 AGAP4Q96P64 663 aa12.77□□□□□ -0.36
PRPF38A-201ENST00000257181 GDF15Q99988 308 aa12.77□□□□□ -0.36
PRPF38A-201ENST00000257181 FGF21Q9NSA1 209 aa12.77□□□□□ -0.36
PRPF38A-201ENST00000257181 BTNL2Q9UIR0 455 aa12.77□□□□□ -0.36
PRPF38A-201ENST00000257181 A0A0G2JN53 185 aa12.77□□□□□ -0.36
PRPF38A-201ENST00000257181 SMAD6O43541 496 aaKnown RBP12.77□□□□□ -0.36
PRPF38A-201ENST00000257181 ZNF821O75541 412 aaPredicted RBP12.77□□□□□ -0.36
PRPF38A-201ENST00000257181 C1orf105O95561 183 aa12.77□□□□□ -0.36
PRPF38A-201ENST00000257181 SLC6A9P48067 706 aa12.77□□□□□ -0.36
PRPF38A-201ENST00000257181 ACADVLP49748 655 aa12.77□□□□□ -0.36
PRPF38A-201ENST00000257181 PRPS1P60891 318 aa12.77□□□□□ -0.36
PRPF38A-201ENST00000257181 ZNF846Q147U1 533 aa12.77□□□□□ -0.36
PRPF38A-201ENST00000257181 EIF2S3LQ2VIR3 472 aaKnown RBP12.77□□□□□ -0.36
PRPF38A-201ENST00000257181 TXNRD3NBQ6F5E7 133 aa12.77□□□□□ -0.36
PRPF38A-201ENST00000257181 SLC25A24Q6NUK1 477 aa12.77□□□□□ -0.36
PRPF38A-201ENST00000257181 IQCKQ8N0W5 287 aa12.77□□□□□ -0.36
PRPF38A-201ENST00000257181 VWA5B2Q8N398 1253 aa12.77□□□□□ -0.36
PRPF38A-201ENST00000257181 ZNF781Q8N8C0 355 aa12.77□□□□□ -0.36
PRPF38A-201ENST00000257181 FAM47BQ8NA70 645 aa12.77□□□□□ -0.36
PRPF38A-201ENST00000257181 MRGPRX1Q96LB2 322 aa12.77□□□□□ -0.36
PRPF38A-201ENST00000257181 TRNT1Q96Q11 434 aaKnown RBP12.77□□□□□ -0.36
PRPF38A-201ENST00000257181 EHD3Q9NZN3 535 aa12.77□□□□□ -0.36
PRPF38A-201ENST00000257181 TAF1LQ8IZX4 1826 aa12.77□□□□□ -0.36
PRPF38A-201ENST00000257181 TRBV11-1A0A0K0K1C0 115 aa12.77□□□□□ -0.37
PRPF38A-201ENST00000257181 SOX1O00570 391 aaPredicted RBP12.77□□□□□ -0.37
PRPF38A-201ENST00000257181 SCO2O43819 266 aa12.77□□□□□ -0.37
PRPF38A-201ENST00000257181 GADD45AP24522 165 aa12.77□□□□□ -0.37
PRPF38A-201ENST00000257181 CLDN8P56748 225 aa12.77□□□□□ -0.37
PRPF38A-201ENST00000257181 ALG1LQ6GMV1 187 aa12.77□□□□□ -0.37
PRPF38A-201ENST00000257181 OR4F3Q6IEY1 312 aa12.77□□□□□ -0.37
PRPF38A-201ENST00000257181 ADNP2Q6IQ32 1131 aa12.77□□□□□ -0.37
PRPF38A-201ENST00000257181 PIGQQ9BRB3 760 aa12.77□□□□□ -0.37
PRPF38A-201ENST00000257181 DOHHQ9BU89 302 aa12.77□□□□□ -0.37
PRPF38A-201ENST00000257181 LYRM4Q9HD34 91 aa12.77□□□□□ -0.37
PRPF38A-201ENST00000257181 ARMCX1Q9P291 453 aa12.77□□□□□ -0.37
PRPF38A-201ENST00000257181 MBD1Q9UIS9 605 aaPredicted RBP12.77□□□□□ -0.37
PRPF38A-201ENST00000257181 BTBD3Q9Y2F9 522 aa12.77□□□□□ -0.37
PRPF38A-201ENST00000257181 CASC3O15234 703 aaKnown RBP12.77□□□□□ -0.37
PRPF38A-201ENST00000257181 PRODHO43272 600 aa12.77□□□□□ -0.37
PRPF38A-201ENST00000257181 OR5F1O95221 314 aa12.77□□□□□ -0.37
PRPF38A-201ENST00000257181 C6orf47O95873 294 aa12.77□□□□□ -0.37
PRPF38A-201ENST00000257181 XRCC1P18887 633 aaPredicted RBP12.77□□□□□ -0.37
PRPF38A-201ENST00000257181 PCBP4P57723 403 aaKnown RBP12.77□□□□□ -0.37
PRPF38A-201ENST00000257181 ZNF460Q14592 562 aa12.77□□□□□ -0.37
PRPF38A-201ENST00000257181 ARHGAP11AQ6P4F7 1023 aa12.77□□□□□ -0.37
PRPF38A-201ENST00000257181 IZUMO2Q6UXV1 221 aa12.77□□□□□ -0.37
PRPF38A-201ENST00000257181 GOLM1Q8NBJ4 401 aa12.77□□□□□ -0.37
PRPF38A-201ENST00000257181 POLDIP3Q9BY77 421 aaKnown RBP12.77□□□□□ -0.37
PRPF38A-201ENST00000257181 AKTIPQ9H8T0 292 aa12.77□□□□□ -0.37
PRPF38A-201ENST00000257181 PRDM4Q9UKN5 801 aa12.77□□□□□ -0.37
PRPF38A-201ENST00000257181 CCL26Q9Y258 94 aa12.77□□□□□ -0.37
PRPF38A-201ENST00000257181 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.76□□□□□ -0.37
PRPF38A-201ENST00000257181 LMO7DNF2Z398 122 aa12.76□□□□□ -0.37
PRPF38A-201ENST00000257181 H0YIG0 161 aa12.76□□□□□ -0.37
PRPF38A-201ENST00000257181 CYC1P08574 325 aa12.76□□□□□ -0.37
PRPF38A-201ENST00000257181 TARDBPQ13148 414 aaKnown RBP eCLIP12.76□□□□□ -0.374e-11■■■■■ 38.3
PRPF38A-201ENST00000257181 JMJD6Q6NYC1 403 aaPredicted RBP12.76□□□□□ -0.37
PRPF38A-201ENST00000257181 OR10A6Q8NH74 314 aa12.76□□□□□ -0.37
PRPF38A-201ENST00000257181 TLCD1Q96CP7 247 aa12.76□□□□□ -0.37
PRPF38A-201ENST00000257181 CHFRQ96EP1 664 aa12.76□□□□□ -0.37
PRPF38A-201ENST00000257181 SLC46A1Q96NT5 459 aa12.76□□□□□ -0.37
PRPF38A-201ENST00000257181 MCHR1Q99705 422 aa12.76□□□□□ -0.37
PRPF38A-201ENST00000257181 EURLQ9NYK6 297 aa12.76□□□□□ -0.37
PRPF38A-201ENST00000257181 AP4B1Q9Y6B7 739 aa12.76□□□□□ -0.37
PRPF38A-201ENST00000257181 LINC01565O15544 149 aa12.76□□□□□ -0.37
PRPF38A-201ENST00000257181 MT-CO3P00414 261 aa12.76□□□□□ -0.37
PRPF38A-201ENST00000257181 BCAP31P51572 246 aa12.76□□□□□ -0.37
PRPF38A-201ENST00000257181 RHAGQ02094 409 aa12.76□□□□□ -0.37
PRPF38A-201ENST00000257181 BDH1Q02338 343 aa12.76□□□□□ -0.37
PRPF38A-201ENST00000257181 LASP1Q14847 261 aaKnown RBP12.76□□□□□ -0.37
PRPF38A-201ENST00000257181 SWT1Q5T5J6 900 aaKnown RBP12.76□□□□□ -0.37
PRPF38A-201ENST00000257181 KIAA0907Q7Z7F0 614 aaPredicted RBP12.76□□□□□ -0.37
PRPF38A-201ENST00000257181 FAM160A2Q8N612 972 aaPredicted RBP12.76□□□□□ -0.37
PRPF38A-201ENST00000257181 IL17RCQ8NAC3 791 aa12.76□□□□□ -0.37
PRPF38A-201ENST00000257181 OR5AR1Q8NGP9 310 aa12.76□□□□□ -0.37
PRPF38A-201ENST00000257181 GRHL3Q8TE85 626 aa12.76□□□□□ -0.37
PRPF38A-201ENST00000257181 MPP4Q96JB8 637 aa12.76□□□□□ -0.37
PRPF38A-201ENST00000257181 LRCH1Q9Y2L9 728 aa12.76□□□□□ -0.37
PRPF38A-201ENST00000257181 GPR75O95800 540 aa12.76□□□□□ -0.37
PRPF38A-201ENST00000257181 CSTBP04080 98 aaKnown RBP12.76□□□□□ -0.37
PRPF38A-201ENST00000257181 GSTT2BP0CG30 244 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms