RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 VMACQ2NL98 169 aa7.21□□□□□ -1.26
RIF1-201ENST00000243326 RNF111Q6ZNA4 994 aa7.21□□□□□ -1.26
RIF1-201ENST00000243326 COQ10AQ96MF6 247 aa7.21□□□□□ -1.26
RIF1-201ENST00000243326 SORT1Q99523 831 aa7.21□□□□□ -1.26
RIF1-201ENST00000243326 SUV39H2Q9H5I1 410 aa7.21□□□□□ -1.26
RIF1-201ENST00000243326 MTMR10Q9NXD2 777 aa7.21□□□□□ -1.26
RIF1-201ENST00000243326 NID2Q14112 1375 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 CMPK1P30085 196 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 PRR5P85299 388 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 FOXM1Q08050 763 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 PNCKQ6P2M8 343 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 AGTRAPQ6RW13 159 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 TMEM185AQ8NFB2 350 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 AGAP5A6NIR3 686 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 HTR1BP28222 390 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 TEAD4Q15561 434 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 GPAT4Q86UL3 456 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 MFSD6LQ8IWD5 586 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 GNPDA2Q8TDQ7 276 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 UBE2FQ969M7 185 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 FKBP10Q96AY3 582 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 NUS1Q96E22 293 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 PIP5K1AQ99755 562 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 ARFGEF2Q9Y6D5 1785 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 NWD2Q9ULI1 1742 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 HMX3A6NHT5 357 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 CLEC2LP0C7M8 214 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 GHRHRQ02643 423 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 WDR45BQ5MNZ6 344 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 TIFABQ6ZNK6 161 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 REM2Q8IYK8 340 aaPredicted RBP7.2□□□□□ -1.26
RIF1-201ENST00000243326 FOXJ1Q92949 421 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 PRR14Q9BWN1 585 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 SCN1AP35498 2009 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 SLC22A2O15244 555 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 INHBCP55103 352 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 NAGSQ8N159 534 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 RANBP3Q9H6Z4 567 aaPredicted RBP7.2□□□□□ -1.26
RIF1-201ENST00000243326 AHSA1O95433 338 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 ATP1B2P14415 290 aaPredicted RBP7.2□□□□□ -1.26
RIF1-201ENST00000243326 LEPRP48357 1165 aaKnown RBP7.2□□□□□ -1.26
RIF1-201ENST00000243326 CRYZQ08257 329 aaKnown RBP7.2□□□□□ -1.26
RIF1-201ENST00000243326 AIMP2Q13155 320 aaKnown RBP7.2□□□□□ -1.26
RIF1-201ENST00000243326 AAK1Q2M2I8 961 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 TBPL2Q6SJ96 375 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 KBTBD6Q86V97 674 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 RNF121Q9H920 327 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 TRIM36Q9NQ86 728 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 DERAQ9Y315 318 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 UBR1Q8IWV7 1749 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 SMIM35A0A1B0GVV1 85 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 UNCXA6NJT0 531 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 CHP2O43745 196 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 NXPH3O95157 252 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 ENPP2Q13822 863 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 SOWAHCQ53LP3 525 aaPredicted RBP7.2□□□□□ -1.26
RIF1-201ENST00000243326 SLC35F5Q8WV83 523 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 SGCDQ92629 289 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 RANBP9Q96S59 729 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 IL36AQ9UHA7 158 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 DNAJC15Q9Y5T4 150 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 MLLT6P55198 1093 aaPredicted RBP7.2□□□□□ -1.26
RIF1-201ENST00000243326 FGL1Q08830 312 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 MAD2L1BPQ15013 274 aaPredicted RBP7.2□□□□□ -1.26
RIF1-201ENST00000243326 ZNF542PQ5EBM4 170 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 PXDC1Q5TGL8 231 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 GPR157Q5UAW9 335 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 SAMD8Q96LT4 415 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 ZNF701Q9NV72 531 aaPredicted RBP7.2□□□□□ -1.26
RIF1-201ENST00000243326 COQ4Q9Y3A0 265 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 A0A1B0GVM2 712 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 LAMP1P11279 417 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 EDN3P14138 238 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 CDKN2CP42773 168 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 FXYD4P59646 89 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 C9orf43Q8TAL5 461 aaPredicted RBP7.2□□□□□ -1.26
RIF1-201ENST00000243326 PCDHGA11Q9Y5H2 935 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 ZNF705GA8MUZ8 300 aaPredicted RBP7.2□□□□□ -1.26
RIF1-201ENST00000243326 SOX1O00570 391 aaPredicted RBP7.2□□□□□ -1.26
RIF1-201ENST00000243326 RGS9O75916 674 aaPredicted RBP7.2□□□□□ -1.26
RIF1-201ENST00000243326 ANXA3P12429 323 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 PTX3P26022 381 aaPredicted RBP7.2□□□□□ -1.26
RIF1-201ENST00000243326 NSG1P42857 185 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 E2F1Q01094 437 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 KIAA1191Q96A73 305 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 DEFB118Q96PH6 123 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 MAGEH1Q9H213 219 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 NMNAT1Q9HAN9 279 aaPredicted RBP7.2□□□□□ -1.26
RIF1-201ENST00000243326 TMEM181Q9P2C4 612 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 KCNS2Q9ULS6 477 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 ATP6V1G2-DDX39BF2Z307 99 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 PPIGQ13427 754 aaKnown RBP eCLIP7.2□□□□□ -1.261e-6■■□□□ 12.1
RIF1-201ENST00000243326 RGMAQ96B86 450 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 APIPQ96GX9 242 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 YTHDF1Q9BYJ9 559 aaKnown RBP7.2□□□□□ -1.26
RIF1-201ENST00000243326 CCDC86Q9H6F5 360 aaKnown RBP7.2□□□□□ -1.26
RIF1-201ENST00000243326 HMX1Q9NP08 348 aaPredicted RBP7.2□□□□□ -1.26
RIF1-201ENST00000243326 CD300AQ9UGN4 299 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 LAMP5Q9UJQ1 280 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 F3P13726 295 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms