RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 KRT73Q86Y46 540 aa21.96■■□□□ 1.11
MSX2-201ENST00000239243 FBLIM1Q8WUP2 373 aa21.96■■□□□ 1.11
MSX2-201ENST00000239243 RLN3Q8WXF3 142 aa21.96■■□□□ 1.11
MSX2-201ENST00000239243 PCED1AQ9H1Q7 454 aa21.96■■□□□ 1.11
MSX2-201ENST00000239243 LTB4R2Q9NPC1 389 aa21.96■■□□□ 1.11
MSX2-201ENST00000239243 PTTG2Q9NZH5 202 aa21.96■■□□□ 1.11
MSX2-201ENST00000239243 GMPPBQ9Y5P6 360 aa21.96■■□□□ 1.11
MSX2-201ENST00000239243 CELA2BP08218 269 aaPredicted RBP21.95■■□□□ 1.1
MSX2-201ENST00000239243 YAP1P46937 504 aaKnown RBP21.95■■□□□ 1.1
MSX2-201ENST00000239243 CDH12P55289 794 aa21.95■■□□□ 1.1
MSX2-201ENST00000239243 IL5RAQ01344 420 aa21.95■■□□□ 1.1
MSX2-201ENST00000239243 UBXN2BQ14CS0 331 aa21.95■■□□□ 1.1
MSX2-201ENST00000239243 MEP1AQ16819 746 aa21.95■■□□□ 1.1
MSX2-201ENST00000239243 DUSP7Q16829 419 aa21.95■■□□□ 1.1
MSX2-201ENST00000239243 ZBED5Q49AG3 693 aa21.95■■□□□ 1.1
MSX2-201ENST00000239243 RNF44Q7L0R7 432 aa21.95■■□□□ 1.1
MSX2-201ENST00000239243 AVL9Q8NBF6 648 aa21.95■■□□□ 1.1
MSX2-201ENST00000239243 OR4C15Q8NGM1 316 aa21.95■■□□□ 1.1
MSX2-201ENST00000239243 MIPOL1Q8TD10 442 aa21.95■■□□□ 1.1
MSX2-201ENST00000239243 ZDHHC1Q8WTX9 485 aa21.95■■□□□ 1.1
MSX2-201ENST00000239243 NPLQ9BXD5 320 aaPredicted RBP21.95■■□□□ 1.1
MSX2-201ENST00000239243 PRAMEF25A6NGN4 478 aa21.95■■□□□ 1.1
MSX2-201ENST00000239243 EMC8O43402 210 aa21.95■■□□□ 1.1
MSX2-201ENST00000239243 NR2F1P10589 423 aa21.95■■□□□ 1.1
MSX2-201ENST00000239243 IL7RP16871 459 aa21.95■■□□□ 1.1
MSX2-201ENST00000239243 JUNDP17535 347 aa21.95■■□□□ 1.1
MSX2-201ENST00000239243 CD247P20963 164 aa21.95■■□□□ 1.1
MSX2-201ENST00000239243 CPN2P22792 545 aa21.95■■□□□ 1.1
MSX2-201ENST00000239243 CD27P26842 260 aa21.95■■□□□ 1.1
MSX2-201ENST00000239243 TLX1P31314 330 aaPredicted RBP21.95■■□□□ 1.1
MSX2-201ENST00000239243 FEN1P39748 380 aaKnown RBP21.95■■□□□ 1.1
MSX2-201ENST00000239243 CRISP3P54108 245 aa21.95■■□□□ 1.1
MSX2-201ENST00000239243 RAPSNQ13702 412 aa21.95■■□□□ 1.1
MSX2-201ENST00000239243 MICAQ29983 383 aa21.95■■□□□ 1.1
MSX2-201ENST00000239243 ARMC6Q6NXE6 501 aa21.95■■□□□ 1.1
MSX2-201ENST00000239243 FAM46DQ8NEK8 389 aa21.95■■□□□ 1.1
MSX2-201ENST00000239243 OR10G2Q8NGC3 310 aa21.95■■□□□ 1.1
MSX2-201ENST00000239243 XAGE5Q8WWM1 108 aa21.95■■□□□ 1.1
MSX2-201ENST00000239243 SHDQ96IW2 340 aa21.95■■□□□ 1.1
MSX2-201ENST00000239243 ZNF681Q96N22 645 aa21.95■■□□□ 1.1
MSX2-201ENST00000239243 SPATA5L1Q9BVQ7 753 aa21.95■■□□□ 1.1
MSX2-201ENST00000239243 GABARAPL3Q9BY60 117 aa21.95■■□□□ 1.1
MSX2-201ENST00000239243 RSL24D1Q9UHA3 163 aaKnown RBP21.95■■□□□ 1.1
MSX2-201ENST00000239243 NDRG4Q9ULP0 352 aaKnown RBP21.95■■□□□ 1.1
MSX2-201ENST00000239243 GOLGA4Q13439 2230 aaKnown RBP21.94■■□□□ 1.1
MSX2-201ENST00000239243 H3BSA7 217 aa21.94■■□□□ 1.1
MSX2-201ENST00000239243 P2RX6O15547 441 aa21.94■■□□□ 1.1
MSX2-201ENST00000239243 CCDC159P0C7I6 412 aa21.94■■□□□ 1.1
MSX2-201ENST00000239243 HMGA2P52926 109 aa21.94■■□□□ 1.1
MSX2-201ENST00000239243 SIM2Q14190 667 aaPredicted RBP21.94■■□□□ 1.1
MSX2-201ENST00000239243 B3GNT6Q6ZMB0 384 aa21.94■■□□□ 1.1
MSX2-201ENST00000239243 TSPYL5Q86VY4 417 aaPredicted RBP21.94■■□□□ 1.1
MSX2-201ENST00000239243 FAM160A2Q8N612 972 aaPredicted RBP21.94■■□□□ 1.1
MSX2-201ENST00000239243 FRMD1Q8N878 549 aa21.94■■□□□ 1.1
MSX2-201ENST00000239243 BBS10Q8TAM1 723 aa21.94■■□□□ 1.1
MSX2-201ENST00000239243 ZCCHC10Q8TBK6 192 aa21.94■■□□□ 1.1
MSX2-201ENST00000239243 ZNF566Q969W8 418 aa21.94■■□□□ 1.1
MSX2-201ENST00000239243 NMD3Q96D46 503 aaKnown RBP21.94■■□□□ 1.1
MSX2-201ENST00000239243 TREX2Q9BQ50 279 aaPredicted RBP21.94■■□□□ 1.1
MSX2-201ENST00000239243 SEC14L3Q9UDX4 400 aa21.94■■□□□ 1.1
MSX2-201ENST00000239243 OR5K3A6NET4 321 aa21.94■■□□□ 1.1
MSX2-201ENST00000239243 AXIN1O15169 862 aa21.94■■□□□ 1.1
MSX2-201ENST00000239243 C8orf89P0DMQ9 161 aa21.94■■□□□ 1.1
MSX2-201ENST00000239243 CLK3P49761 638 aaKnown RBP21.94■■□□□ 1.1
MSX2-201ENST00000239243 PRKAG1P54619 331 aa21.94■■□□□ 1.1
MSX2-201ENST00000239243 NPRL3Q12980 569 aa21.94■■□□□ 1.1
MSX2-201ENST00000239243 MAPK11Q15759 364 aa21.94■■□□□ 1.1
MSX2-201ENST00000239243 CTU2Q2VPK5 515 aaKnown RBP21.94■■□□□ 1.1
MSX2-201ENST00000239243 TMEM107Q6UX40 140 aa21.94■■□□□ 1.1
MSX2-201ENST00000239243 KCTD8Q6ZWB6 473 aa21.94■■□□□ 1.1
MSX2-201ENST00000239243 ZNF605Q86T29 641 aa21.94■■□□□ 1.1
MSX2-201ENST00000239243 TMIGD2Q96BF3 282 aa21.94■■□□□ 1.1
MSX2-201ENST00000239243 ZNF354BQ96LW1 612 aa21.94■■□□□ 1.1
MSX2-201ENST00000239243 TUBA1CQ9BQE3 449 aa21.94■■□□□ 1.1
MSX2-201ENST00000239243 PSD2Q9BQI7 771 aa21.94■■□□□ 1.1
MSX2-201ENST00000239243 LRRC61Q9BV99 259 aa21.94■■□□□ 1.1
MSX2-201ENST00000239243 PAPOLBQ9NRJ5 636 aaKnown RBP21.94■■□□□ 1.1
MSX2-201ENST00000239243 ABCB7O75027 752 aa21.93■■□□□ 1.1
MSX2-201ENST00000239243 GADD45GO95257 159 aa21.93■■□□□ 1.1
MSX2-201ENST00000239243 HMGN2P05204 90 aaKnown RBP21.93■■□□□ 1.1
MSX2-201ENST00000239243 CYP4B1P13584 511 aa21.93■■□□□ 1.1
MSX2-201ENST00000239243 ALOX12P18054 663 aa21.93■■□□□ 1.1
MSX2-201ENST00000239243 C1orf61Q13536 156 aa21.93■■□□□ 1.1
MSX2-201ENST00000239243 GPR19Q15760 415 aa21.93■■□□□ 1.1
MSX2-201ENST00000239243 DEFB134Q4QY38 66 aa21.93■■□□□ 1.1
MSX2-201ENST00000239243 PTCRAQ6ISU1 281 aaPredicted RBP21.93■■□□□ 1.1
MSX2-201ENST00000239243 OR5D16Q8NGK9 328 aa21.93■■□□□ 1.1
MSX2-201ENST00000239243 APOBEC4Q8WW27 367 aaKnown RBP21.93■■□□□ 1.1
MSX2-201ENST00000239243 MAGED4Q96JG8 741 aa21.93■■□□□ 1.1
MSX2-201ENST00000239243 NELL2Q99435 816 aa21.93■■□□□ 1.1
MSX2-201ENST00000239243 PITX2Q99697 317 aa21.93■■□□□ 1.1
MSX2-201ENST00000239243 CHRDQ9H2X0 955 aa21.93■■□□□ 1.1
MSX2-201ENST00000239243 POLR1BQ9H9Y6 1135 aa21.93■■□□□ 1.1
MSX2-201ENST00000239243 BCL2L10Q9HD36 194 aa21.93■■□□□ 1.1
MSX2-201ENST00000239243 KCMF1Q9P0J7 381 aa21.93■■□□□ 1.1
MSX2-201ENST00000239243 DAPP1Q9UN19 280 aa21.93■■□□□ 1.1
MSX2-201ENST00000239243 POFUT2Q9Y2G5 429 aa21.93■■□□□ 1.1
MSX2-201ENST00000239243 GPC6Q9Y625 555 aaPredicted RBP21.93■■□□□ 1.1
MSX2-201ENST00000239243 METTL12A8MUP2 240 aa21.92■■□□□ 1.1
MSX2-201ENST00000239243 H0YGG7 62 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms