RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 PTDSS2Q9BVG9 487 aa12.33□□□□□ -0.44
VAMP4-201ENST00000236192 TOLLIPQ9H0E2 274 aa12.33□□□□□ -0.44
VAMP4-201ENST00000236192 ARGFXA6NJG6 315 aa12.32□□□□□ -0.44
VAMP4-201ENST00000236192 RIIAD1A6NNX1 92 aa12.32□□□□□ -0.44
VAMP4-201ENST00000236192 GIPP09681 153 aaPredicted RBP12.32□□□□□ -0.44
VAMP4-201ENST00000236192 GPR143P51810 404 aa12.32□□□□□ -0.44
VAMP4-201ENST00000236192 NFKB2Q00653 900 aa12.32□□□□□ -0.44
VAMP4-201ENST00000236192 LYPLAL1Q5VWZ2 237 aa12.32□□□□□ -0.44
VAMP4-201ENST00000236192 OR52P1PQ8NH57 321 aa12.32□□□□□ -0.44
VAMP4-201ENST00000236192 NFKBIDQ8NI38 313 aa12.32□□□□□ -0.44
VAMP4-201ENST00000236192 VAPAQ9P0L0 249 aa12.32□□□□□ -0.44
VAMP4-201ENST00000236192 FAAHO00519 579 aa12.32□□□□□ -0.44
VAMP4-201ENST00000236192 TPST2O60704 377 aa12.32□□□□□ -0.44
VAMP4-201ENST00000236192 PET100P0DJ07 73 aa12.32□□□□□ -0.44
VAMP4-201ENST00000236192 MECP2P51608 486 aaKnown RBP12.32□□□□□ -0.44
VAMP4-201ENST00000236192 BATFQ16520 125 aa12.32□□□□□ -0.44
VAMP4-201ENST00000236192 HSD17B13Q7Z5P4 300 aaPredicted RBP12.32□□□□□ -0.44
VAMP4-201ENST00000236192 KRTCAP2Q8N6L1 136 aa12.32□□□□□ -0.44
VAMP4-201ENST00000236192 C1orf52Q8N6N3 182 aaKnown RBP12.32□□□□□ -0.44
VAMP4-201ENST00000236192 CAMKVQ8NCB2 501 aa12.32□□□□□ -0.44
VAMP4-201ENST00000236192 MANBAO00462 879 aa12.32□□□□□ -0.44
VAMP4-201ENST00000236192 ST8SIA5O15466 376 aa12.32□□□□□ -0.44
VAMP4-201ENST00000236192 GATBO75879 557 aaKnown RBP12.32□□□□□ -0.44
VAMP4-201ENST00000236192 UBXN7O94888 489 aa12.32□□□□□ -0.44
VAMP4-201ENST00000236192 SLC10A3P09131 477 aa12.32□□□□□ -0.44
VAMP4-201ENST00000236192 PCP4P48539 62 aa12.32□□□□□ -0.44
VAMP4-201ENST00000236192 CAP1Q01518 475 aa12.32□□□□□ -0.44
VAMP4-201ENST00000236192 TMEM132BQ14DG7 1078 aa12.32□□□□□ -0.44
VAMP4-201ENST00000236192 PTGES3Q15185 160 aaKnown RBP12.32□□□□□ -0.44
VAMP4-201ENST00000236192 ADCK2Q7Z695 626 aa12.32□□□□□ -0.44
VAMP4-201ENST00000236192 CMIPQ8IY22 773 aa12.32□□□□□ -0.44
VAMP4-201ENST00000236192 ZNF283Q8N7M2 679 aa12.32□□□□□ -0.44
VAMP4-201ENST00000236192 OSBPL2Q9H1P3 480 aa12.32□□□□□ -0.44
VAMP4-201ENST00000236192 PLCXD1Q9NUJ7 323 aa12.32□□□□□ -0.44
VAMP4-201ENST00000236192 TMEM184CQ9NVA4 438 aa12.32□□□□□ -0.44
VAMP4-201ENST00000236192 SLAMF8Q9P0V8 285 aa12.32□□□□□ -0.44
VAMP4-201ENST00000236192 PCDHB7Q9Y5E2 793 aa12.32□□□□□ -0.44
VAMP4-201ENST00000236192 TIAM2Q8IVF5 1701 aa12.32□□□□□ -0.44
VAMP4-201ENST00000236192 SPATA31C2B4DYI2 1134 aa12.32□□□□□ -0.44
VAMP4-201ENST00000236192 CD1EP15812 388 aa12.32□□□□□ -0.44
VAMP4-201ENST00000236192 MAOAP21397 527 aa12.32□□□□□ -0.44
VAMP4-201ENST00000236192 OR1E1P30953 314 aa12.32□□□□□ -0.44
VAMP4-201ENST00000236192 MASP1P48740 699 aa12.32□□□□□ -0.44
VAMP4-201ENST00000236192 SEC61A1P61619 476 aaKnown RBP12.32□□□□□ -0.44
VAMP4-201ENST00000236192 CDK6Q00534 326 aa12.32□□□□□ -0.44
VAMP4-201ENST00000236192 PLK5Q496M5 336 aa12.32□□□□□ -0.44
VAMP4-201ENST00000236192 SCGB2B2Q4G0G5 96 aa12.32□□□□□ -0.44
VAMP4-201ENST00000236192 SPIN4Q56A73 249 aa12.32□□□□□ -0.44
VAMP4-201ENST00000236192 RAB41Q5JT25 222 aa12.32□□□□□ -0.44
VAMP4-201ENST00000236192 ZNF527Q8NB42 609 aa12.32□□□□□ -0.44
VAMP4-201ENST00000236192 LRR1Q96L50 414 aa12.32□□□□□ -0.44
VAMP4-201ENST00000236192 AARSD1Q9BTE6 412 aaKnown RBP12.32□□□□□ -0.44
VAMP4-201ENST00000236192 LGR4Q9BXB1 951 aa12.32□□□□□ -0.44
VAMP4-201ENST00000236192 IMP3Q9NV31 184 aaKnown RBP12.32□□□□□ -0.44
VAMP4-201ENST00000236192 POMT2Q9UKY4 750 aa12.32□□□□□ -0.44
VAMP4-201ENST00000236192 MED1Q15648 1581 aaPredicted RBP12.32□□□□□ -0.44
VAMP4-201ENST00000236192 G0S2P27469 103 aa12.31□□□□□ -0.44
VAMP4-201ENST00000236192 SCNN1AP37088 669 aa12.31□□□□□ -0.44
VAMP4-201ENST00000236192 GCGRP47871 477 aa12.31□□□□□ -0.44
VAMP4-201ENST00000236192 NDUFA6P56556 154 aa12.31□□□□□ -0.44
VAMP4-201ENST00000236192 HOXC5Q00444 222 aa12.31□□□□□ -0.44
VAMP4-201ENST00000236192 MGAT3Q09327 533 aa12.31□□□□□ -0.44
VAMP4-201ENST00000236192 ZNF630Q2M218 657 aaPredicted RBP12.31□□□□□ -0.44
VAMP4-201ENST00000236192 MTFR2Q6P444 385 aa12.31□□□□□ -0.44
VAMP4-201ENST00000236192 C10orf53Q8N6V4 93 aa12.31□□□□□ -0.44
VAMP4-201ENST00000236192 OR52H1Q8NGJ2 320 aa12.31□□□□□ -0.44
VAMP4-201ENST00000236192 OCSTAMPQ9BR26 566 aa12.31□□□□□ -0.44
VAMP4-201ENST00000236192 RHCGQ9UBD6 479 aa12.31□□□□□ -0.44
VAMP4-201ENST00000236192 CSNK1G3Q9Y6M4 447 aa12.31□□□□□ -0.44
VAMP4-201ENST00000236192 C2orf92A0A1B0GVN3 265 aa12.31□□□□□ -0.44
VAMP4-201ENST00000236192 A0A1W2PRQ8 180 aa12.31□□□□□ -0.44
VAMP4-201ENST00000236192 TMEM72A0PK05 275 aa12.31□□□□□ -0.44
VAMP4-201ENST00000236192 ADAP00813 363 aa12.31□□□□□ -0.44
VAMP4-201ENST00000236192 DUSP4Q13115 394 aa12.31□□□□□ -0.44
VAMP4-201ENST00000236192 GPAT4Q86UL3 456 aa12.31□□□□□ -0.44
VAMP4-201ENST00000236192 GLCCI1Q86VQ1 547 aa12.31□□□□□ -0.44
VAMP4-201ENST00000236192 RRNAD1Q96FB5 475 aaKnown RBP12.31□□□□□ -0.44
VAMP4-201ENST00000236192 CDT1Q9H211 546 aa12.31□□□□□ -0.44
VAMP4-201ENST00000236192 ZFYVE1Q9HBF4 777 aa12.31□□□□□ -0.44
VAMP4-201ENST00000236192 BPIFA1Q9NP55 256 aa12.31□□□□□ -0.44
VAMP4-201ENST00000236192 POT1Q9NUX5 634 aa12.31□□□□□ -0.44
VAMP4-201ENST00000236192 TRPS1Q9UHF7 1281 aa12.31□□□□□ -0.44
VAMP4-201ENST00000236192 FBXL3Q9UKT7 428 aa12.31□□□□□ -0.44
VAMP4-201ENST00000236192 NDRG4Q9ULP0 352 aaKnown RBP12.31□□□□□ -0.44
VAMP4-201ENST00000236192 TNFRSF10BO14763 440 aa12.31□□□□□ -0.44
VAMP4-201ENST00000236192 PLSCR1O15162 318 aa12.31□□□□□ -0.44
VAMP4-201ENST00000236192 CAP2P40123 477 aa12.31□□□□□ -0.44
VAMP4-201ENST00000236192 AFF3P51826 1226 aaKnown RBP12.31□□□□□ -0.44
VAMP4-201ENST00000236192 HYAL2Q12891 473 aa12.31□□□□□ -0.44
VAMP4-201ENST00000236192 BOP1Q14137 746 aaKnown RBP12.31□□□□□ -0.44
VAMP4-201ENST00000236192 TAZQ16635 292 aa12.31□□□□□ -0.44
VAMP4-201ENST00000236192 PTCHD3Q3KNS1 767 aa12.31□□□□□ -0.44
VAMP4-201ENST00000236192 COL13A1Q5TAT6 717 aaPredicted RBP12.31□□□□□ -0.44
VAMP4-201ENST00000236192 SMYD5Q6GMV2 418 aa12.31□□□□□ -0.44
VAMP4-201ENST00000236192 LRRC69Q6ZNQ3 347 aa12.31□□□□□ -0.44
VAMP4-201ENST00000236192 FAM98AQ8NCA5 519 aaKnown RBP12.31□□□□□ -0.44
VAMP4-201ENST00000236192 OR2S2Q9NQN1 319 aa12.31□□□□□ -0.44
VAMP4-201ENST00000236192 EVLQ9UI08 416 aaPredicted RBP12.31□□□□□ -0.44
VAMP4-201ENST00000236192 TUBGCP6Q96RT7 1819 aa12.31□□□□□ -0.44
VAMP4-201ENST00000236192 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms