RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 CERKQ8TCT0 537 aa12.4□□□□□ -0.42
MSH2-201ENST00000233146 FCRL5Q96RD9 977 aa12.4□□□□□ -0.42
MSH2-201ENST00000233146 TAAR1Q96RJ0 339 aa12.4□□□□□ -0.42
MSH2-201ENST00000233146 ZYG11BQ9C0D3 744 aa12.4□□□□□ -0.42
MSH2-201ENST00000233146 SLC6A20Q9NP91 592 aa12.4□□□□□ -0.42
MSH2-201ENST00000233146 NLGN3Q9NZ94 848 aa12.4□□□□□ -0.42
MSH2-201ENST00000233146 CRYL1Q9Y2S2 319 aa12.4□□□□□ -0.42
MSH2-201ENST00000233146 SF3B6Q9Y3B4 125 aaKnown RBP12.4□□□□□ -0.42
MSH2-201ENST00000233146 ALPK3Q96L96 1907 aa12.4□□□□□ -0.42
MSH2-201ENST00000233146 CHURC1-FNTBB4DL54 471 aa12.39□□□□□ -0.43
MSH2-201ENST00000233146 STK25O00506 426 aa12.39□□□□□ -0.43
MSH2-201ENST00000233146 NFICP08651 508 aa12.39□□□□□ -0.43
MSH2-201ENST00000233146 CHRM5P08912 532 aaPredicted RBP12.39□□□□□ -0.43
MSH2-201ENST00000233146 ELK1P19419 428 aa12.39□□□□□ -0.43
MSH2-201ENST00000233146 CLDN8P56748 225 aa12.39□□□□□ -0.43
MSH2-201ENST00000233146 HSD17B7P56937 341 aa12.39□□□□□ -0.43
MSH2-201ENST00000233146 ILKQ13418 452 aa12.39□□□□□ -0.43
MSH2-201ENST00000233146 GK2Q14410 553 aaPredicted RBP12.39□□□□□ -0.43
MSH2-201ENST00000233146 PON3Q15166 354 aa12.39□□□□□ -0.43
MSH2-201ENST00000233146 KLHL26Q53HC5 615 aa12.39□□□□□ -0.43
MSH2-201ENST00000233146 QSOX2Q6ZRP7 698 aa12.39□□□□□ -0.43
MSH2-201ENST00000233146 MAMDC2Q7Z304 686 aaPredicted RBP12.39□□□□□ -0.43
MSH2-201ENST00000233146 SERPINA11Q86U17 422 aa12.39□□□□□ -0.43
MSH2-201ENST00000233146 KRTCAP2Q8N6L1 136 aa12.39□□□□□ -0.43
MSH2-201ENST00000233146 TSGA13Q96PP4 275 aa12.39□□□□□ -0.43
MSH2-201ENST00000233146 ZNF382Q96SR6 550 aa12.39□□□□□ -0.43
MSH2-201ENST00000233146 PIPOXQ9P0Z9 390 aa12.39□□□□□ -0.43
MSH2-201ENST00000233146 ADAMTSL1Q8N6G6 1762 aa12.39□□□□□ -0.43
MSH2-201ENST00000233146 QSER1Q2KHR3 1735 aa12.39□□□□□ -0.43
MSH2-201ENST00000233146 POM121BA6NF01 834 aa12.39□□□□□ -0.43
MSH2-201ENST00000233146 KLK8O60259 260 aa12.39□□□□□ -0.43
MSH2-201ENST00000233146 SUSD5O60279 629 aa12.39□□□□□ -0.43
MSH2-201ENST00000233146 TFP02787 698 aa12.39□□□□□ -0.43
MSH2-201ENST00000233146 RPS25P62851 125 aaKnown RBP12.39□□□□□ -0.43
MSH2-201ENST00000233146 ERV3-1Q14264 604 aa12.39□□□□□ -0.43
MSH2-201ENST00000233146 SEC23BQ15437 767 aa12.39□□□□□ -0.43
MSH2-201ENST00000233146 TSEN54Q7Z6J9 526 aaKnown RBP12.39□□□□□ -0.43
MSH2-201ENST00000233146 DEFB106AQ8N104 65 aa12.39□□□□□ -0.43
MSH2-201ENST00000233146 ATPAF2Q8N5M1 289 aa12.39□□□□□ -0.43
MSH2-201ENST00000233146 WDSUB1Q8N9V3 476 aa12.39□□□□□ -0.43
MSH2-201ENST00000233146 PXT1Q8NFP0 134 aa12.39□□□□□ -0.43
MSH2-201ENST00000233146 NR4A3Q92570 626 aa12.39□□□□□ -0.43
MSH2-201ENST00000233146 C1GALT1C1Q96EU7 318 aa12.39□□□□□ -0.43
MSH2-201ENST00000233146 CDK15Q96Q40 435 aa12.39□□□□□ -0.43
MSH2-201ENST00000233146 OSMRQ99650 979 aa12.39□□□□□ -0.43
MSH2-201ENST00000233146 ENAMQ9NRM1 1142 aa12.39□□□□□ -0.43
MSH2-201ENST00000233146 CFAP97Q9P2B7 532 aa12.39□□□□□ -0.43
MSH2-201ENST00000233146 EXTL2Q9UBQ6 330 aa12.39□□□□□ -0.43
MSH2-201ENST00000233146 SLC9A8Q9Y2E8 581 aa12.39□□□□□ -0.43
MSH2-201ENST00000233146 PRRG1O14668 218 aa12.39□□□□□ -0.43
MSH2-201ENST00000233146 CASKO14936 926 aa12.39□□□□□ -0.43
MSH2-201ENST00000233146 CBR1P16152 277 aa12.39□□□□□ -0.43
MSH2-201ENST00000233146 PPP3CBP16298 524 aa12.39□□□□□ -0.43
MSH2-201ENST00000233146 FGF9P31371 208 aaPredicted RBP12.39□□□□□ -0.43
MSH2-201ENST00000233146 KCNJ10P78508 379 aa12.39□□□□□ -0.43
MSH2-201ENST00000233146 ZNF155Q12901 538 aaPredicted RBP12.39□□□□□ -0.43
MSH2-201ENST00000233146 VMACQ2NL98 169 aa12.39□□□□□ -0.43
MSH2-201ENST00000233146 ZNF792Q3KQV3 632 aa12.39□□□□□ -0.43
MSH2-201ENST00000233146 SLC36A2Q495M3 483 aa12.39□□□□□ -0.43
MSH2-201ENST00000233146 CRTC2Q53ET0 693 aaPredicted RBP12.39□□□□□ -0.43
MSH2-201ENST00000233146 GPR26Q8NDV2 337 aa12.39□□□□□ -0.43
MSH2-201ENST00000233146 TMIEQ8NEW7 156 aa12.39□□□□□ -0.43
MSH2-201ENST00000233146 OR52B6Q8NGF0 335 aa12.39□□□□□ -0.43
MSH2-201ENST00000233146 OR4C15Q8NGM1 316 aa12.39□□□□□ -0.43
MSH2-201ENST00000233146 RXFP4Q8TDU9 374 aa12.39□□□□□ -0.43
MSH2-201ENST00000233146 C12orf66Q96MD2 445 aa12.39□□□□□ -0.43
MSH2-201ENST00000233146 HHIPQ96QV1 700 aa12.39□□□□□ -0.43
MSH2-201ENST00000233146 SPRTNQ9H040 489 aaPredicted RBP12.39□□□□□ -0.43
MSH2-201ENST00000233146 POPDC3Q9HBV1 291 aa12.39□□□□□ -0.43
MSH2-201ENST00000233146 TREM2Q9NZC2 230 aa12.39□□□□□ -0.43
MSH2-201ENST00000233146 MARCH4Q9P2E8 410 aaPredicted RBP12.39□□□□□ -0.43
MSH2-201ENST00000233146 GSTK1Q9Y2Q3 226 aa12.39□□□□□ -0.43
MSH2-201ENST00000233146 PCDHB7Q9Y5E2 793 aa12.39□□□□□ -0.43
MSH2-201ENST00000233146 GABRR3A8MPY1 467 aa12.38□□□□□ -0.43
MSH2-201ENST00000233146 DISC1C4P0D8 188 aa12.38□□□□□ -0.43
MSH2-201ENST00000233146 GALR3O60755 368 aaPredicted RBP12.38□□□□□ -0.43
MSH2-201ENST00000233146 SEMA7AO75326 666 aa12.38□□□□□ -0.43
MSH2-201ENST00000233146 ZDHHC11BP0C7U3 371 aa12.38□□□□□ -0.43
MSH2-201ENST00000233146 GIFP27352 417 aa12.38□□□□□ -0.43
MSH2-201ENST00000233146 ARSDP51689 593 aa12.38□□□□□ -0.43
MSH2-201ENST00000233146 RNF4P78317 190 aa12.38□□□□□ -0.43
MSH2-201ENST00000233146 ZRANB3Q5FWF4 1079 aa12.38□□□□□ -0.43
MSH2-201ENST00000233146 DOK6Q6PKX4 331 aa12.38□□□□□ -0.43
MSH2-201ENST00000233146 USP30Q70CQ3 517 aa12.38□□□□□ -0.43
MSH2-201ENST00000233146 SERPINA12Q8IW75 414 aa12.38□□□□□ -0.43
MSH2-201ENST00000233146 GPR65Q8IYL9 337 aa12.38□□□□□ -0.43
MSH2-201ENST00000233146 SVBPQ8N300 66 aa12.38□□□□□ -0.43
MSH2-201ENST00000233146 SLC43A2Q8N370 569 aa12.38□□□□□ -0.43
MSH2-201ENST00000233146 METTL6Q8TCB7 284 aa12.38□□□□□ -0.43
MSH2-201ENST00000233146 LCORQ96JN0 433 aaPredicted RBP12.38□□□□□ -0.43
MSH2-201ENST00000233146 TSNAXQ99598 290 aaKnown RBP12.38□□□□□ -0.43
MSH2-201ENST00000233146 INPP5KQ9BT40 448 aa12.38□□□□□ -0.43
MSH2-201ENST00000233146 CACNG6Q9BXT2 260 aa12.38□□□□□ -0.43
MSH2-201ENST00000233146 IMP3Q9NV31 184 aaKnown RBP12.38□□□□□ -0.43
MSH2-201ENST00000233146 ZNF624Q9P2J8 865 aaPredicted RBP12.38□□□□□ -0.43
MSH2-201ENST00000233146 NEU3Q9UQ49 428 aa12.38□□□□□ -0.43
MSH2-201ENST00000233146 CA5BQ9Y2D0 317 aa12.38□□□□□ -0.43
MSH2-201ENST00000233146 CCL27Q9Y4X3 112 aa12.38□□□□□ -0.43
MSH2-201ENST00000233146 ZAR1LA6NP61 321 aa12.38□□□□□ -0.43
MSH2-201ENST00000233146 SLC31A2O15432 143 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms