RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 LAS2Q8IYD9 372 aa19.52■□□□□ 0.72
SNX3-201ENST00000230085 OXR1Q8N573 874 aa19.52■□□□□ 0.72
SNX3-201ENST00000230085 CLDN22Q8N7P3 220 aa19.52■□□□□ 0.72
SNX3-201ENST00000230085 GDPD1Q8N9F7 314 aa19.52■□□□□ 0.72
SNX3-201ENST00000230085 FAM46DQ8NEK8 389 aa19.52■□□□□ 0.72
SNX3-201ENST00000230085 PUM2Q8TB72 1066 aaKnown RBP eCLIP19.52■□□□□ 0.725e-37■■■■□ 21.8
SNX3-201ENST00000230085 SPPL2AQ8TCT8 520 aa19.52■□□□□ 0.72
SNX3-201ENST00000230085 OR8D1Q8WZ84 308 aa19.52■□□□□ 0.72
SNX3-201ENST00000230085 SLC7A6Q92536 515 aa19.52■□□□□ 0.72
SNX3-201ENST00000230085 VOPP1Q96AW1 172 aa19.52■□□□□ 0.72
SNX3-201ENST00000230085 GON7Q9BXV9 100 aa19.52■□□□□ 0.72
SNX3-201ENST00000230085 SLC22A4Q9H015 551 aa19.52■□□□□ 0.72
SNX3-201ENST00000230085 RSPH9Q9H1X1 276 aaPredicted RBP19.52■□□□□ 0.72
SNX3-201ENST00000230085 MAU2Q9Y6X3 613 aa19.52■□□□□ 0.72
SNX3-201ENST00000230085 ENPP4Q9Y6X5 453 aa19.52■□□□□ 0.72
SNX3-201ENST00000230085 VPS13AQ96RL7 3174 aa19.52■□□□□ 0.72
SNX3-201ENST00000230085 DMDP11532 3685 aa19.52■□□□□ 0.72
SNX3-201ENST00000230085 HYKKA2RU49 373 aa19.52■□□□□ 0.71
SNX3-201ENST00000230085 PCDH7O60245 1069 aa19.52■□□□□ 0.71
SNX3-201ENST00000230085 IGSF6O95976 241 aa19.52■□□□□ 0.71
SNX3-201ENST00000230085 IL1AP01583 271 aa19.52■□□□□ 0.71
SNX3-201ENST00000230085 DNTTP04053 509 aa19.52■□□□□ 0.71
SNX3-201ENST00000230085 IL7P13232 177 aa19.52■□□□□ 0.71
SNX3-201ENST00000230085 HLA-DMAP28067 261 aa19.52■□□□□ 0.71
SNX3-201ENST00000230085 CRISP1P54107 249 aa19.52■□□□□ 0.71
SNX3-201ENST00000230085 CRISP3P54108 245 aa19.52■□□□□ 0.71
SNX3-201ENST00000230085 ARMC4Q5T2S8 1044 aa19.52■□□□□ 0.71
SNX3-201ENST00000230085 GCNT6Q5T4J0 391 aa19.52■□□□□ 0.71
SNX3-201ENST00000230085 FRMPD2BQ6IN97 320 aa19.52■□□□□ 0.71
SNX3-201ENST00000230085 XKRXQ6PP77 449 aa19.52■□□□□ 0.71
SNX3-201ENST00000230085 NAGSQ8N159 534 aa19.52■□□□□ 0.71
SNX3-201ENST00000230085 ANGPTL6Q8NI99 470 aa19.52■□□□□ 0.71
SNX3-201ENST00000230085 DEPDC7Q96QD5 511 aa19.52■□□□□ 0.71
SNX3-201ENST00000230085 EBPLQ9BY08 206 aa19.52■□□□□ 0.71
SNX3-201ENST00000230085 BARHL1Q9BZE3 327 aa19.52■□□□□ 0.71
SNX3-201ENST00000230085 MIR1-1HGQ9H1L0 117 aa19.52■□□□□ 0.71
SNX3-201ENST00000230085 ZDHHC6Q9H6R6 413 aa19.52■□□□□ 0.71
SNX3-201ENST00000230085 PRMT8Q9NR22 394 aaPredicted RBP19.52■□□□□ 0.71
SNX3-201ENST00000230085 GPATCH2Q9NW75 528 aa19.52■□□□□ 0.71
SNX3-201ENST00000230085 SLC22A14Q9Y267 594 aa19.52■□□□□ 0.71
SNX3-201ENST00000230085 MYO15AQ9UKN7 3530 aa19.51■□□□□ 0.71
SNX3-201ENST00000230085 ZNF318Q5VUA4 2279 aa19.51■□□□□ 0.71
SNX3-201ENST00000230085 PRAMEF25A6NGN4 478 aa19.51■□□□□ 0.71
SNX3-201ENST00000230085 POP4O95707 220 aaKnown RBP19.51■□□□□ 0.71
SNX3-201ENST00000230085 ADAP00813 363 aa19.51■□□□□ 0.71
SNX3-201ENST00000230085 DDX5P17844 614 aaKnown RBP19.51■□□□□ 0.71
SNX3-201ENST00000230085 CD22P20273 847 aa19.51■□□□□ 0.71
SNX3-201ENST00000230085 RPL3P39023 403 aaKnown RBP19.51■□□□□ 0.71
SNX3-201ENST00000230085 CRYBB2P43320 205 aa19.51■□□□□ 0.71
SNX3-201ENST00000230085 METAP1P53582 386 aa19.51■□□□□ 0.71
SNX3-201ENST00000230085 CDH12P55289 794 aa19.51■□□□□ 0.71
SNX3-201ENST00000230085 GNG2P59768 71 aa19.51■□□□□ 0.71
SNX3-201ENST00000230085 ARPC4P59998 168 aa19.51■□□□□ 0.71
SNX3-201ENST00000230085 IRF8Q02556 426 aa19.51■□□□□ 0.71
SNX3-201ENST00000230085 MLLT11Q13015 90 aaPredicted RBP19.51■□□□□ 0.71
SNX3-201ENST00000230085 PDE7AQ13946 482 aa19.51■□□□□ 0.71
SNX3-201ENST00000230085 POM121L1PQ3SYA9 428 aa19.51■□□□□ 0.71
SNX3-201ENST00000230085 ARSIQ5FYB1 569 aa19.51■□□□□ 0.71
SNX3-201ENST00000230085 SLC25A30Q5SVS4 291 aa19.51■□□□□ 0.71
SNX3-201ENST00000230085 TCTE3Q8IZS6 198 aa19.51■□□□□ 0.71
SNX3-201ENST00000230085 CAMKK1Q8N5S9 505 aa19.51■□□□□ 0.71
SNX3-201ENST00000230085 GPR26Q8NDV2 337 aa19.51■□□□□ 0.71
SNX3-201ENST00000230085 PROKR2Q8NFJ6 384 aa19.51■□□□□ 0.71
SNX3-201ENST00000230085 ECHDC3Q96DC8 303 aa19.51■□□□□ 0.71
SNX3-201ENST00000230085 MED18Q9BUE0 208 aa19.51■□□□□ 0.71
SNX3-201ENST00000230085 C1GALT1Q9NS00 363 aa19.51■□□□□ 0.71
SNX3-201ENST00000230085 ERVK13-1Q9NX77 482 aa19.51■□□□□ 0.71
SNX3-201ENST00000230085 IL36AQ9UHA7 158 aa19.51■□□□□ 0.71
SNX3-201ENST00000230085 LEFTY1O75610 366 aa19.5■□□□□ 0.71
SNX3-201ENST00000230085 MFN2O95140 757 aa19.5■□□□□ 0.71
SNX3-201ENST00000230085 APBB3O95704 486 aa19.5■□□□□ 0.71
SNX3-201ENST00000230085 PRKCAP17252 672 aa19.5■□□□□ 0.71
SNX3-201ENST00000230085 RPS19P39019 145 aaKnown RBP19.5■□□□□ 0.71
SNX3-201ENST00000230085 MRPS15P82914 257 aaKnown RBP19.5■□□□□ 0.71
SNX3-201ENST00000230085 CSTF1Q05048 431 aaKnown RBP19.5■□□□□ 0.71
SNX3-201ENST00000230085 DMWDQ09019 674 aa19.5■□□□□ 0.71
SNX3-201ENST00000230085 HYAL2Q12891 473 aa19.5■□□□□ 0.71
SNX3-201ENST00000230085 MED22Q15528 200 aa19.5■□□□□ 0.71
SNX3-201ENST00000230085 DUSP7Q16829 419 aa19.5■□□□□ 0.71
SNX3-201ENST00000230085 SIPA1Q96FS4 1042 aa19.5■□□□□ 0.71
SNX3-201ENST00000230085 TPSD1Q9BZJ3 242 aa19.5■□□□□ 0.71
SNX3-201ENST00000230085 C14orf119Q9NWQ9 140 aa19.5■□□□□ 0.71
SNX3-201ENST00000230085 ZNF451Q9Y4E5 1061 aa19.5■□□□□ 0.71
SNX3-201ENST00000230085 HLA-DQB1P01920 261 aa19.49■□□□□ 0.71
SNX3-201ENST00000230085 ADRA2AP08913 450 aa19.49■□□□□ 0.71
SNX3-201ENST00000230085 GAAP10253 952 aa19.49■□□□□ 0.71
SNX3-201ENST00000230085 MAGP20916 626 aa19.49■□□□□ 0.71
SNX3-201ENST00000230085 PSMA1P25786 263 aaKnown RBP19.49■□□□□ 0.71
SNX3-201ENST00000230085 TIA1P31483 386 aaKnown RBP eCLIP19.49■□□□□ 0.713e-15■■■■■ 33.6
SNX3-201ENST00000230085 ILKQ13418 452 aa19.49■□□□□ 0.71
SNX3-201ENST00000230085 HSDL2Q6YN16 418 aa19.49■□□□□ 0.71
SNX3-201ENST00000230085 NOXA1Q86UR1 476 aa19.49■□□□□ 0.71
SNX3-201ENST00000230085 OR8H2Q8N162 312 aa19.49■□□□□ 0.71
SNX3-201ENST00000230085 VWA5B2Q8N398 1253 aa19.49■□□□□ 0.71
SNX3-201ENST00000230085 UTP15Q8TED0 518 aaKnown RBP19.49■□□□□ 0.71
SNX3-201ENST00000230085 ZC3HAV1LQ96H79 300 aaKnown RBP19.49■□□□□ 0.71
SNX3-201ENST00000230085 DHRS1Q96LJ7 313 aa19.49■□□□□ 0.71
SNX3-201ENST00000230085 MND1Q9BWT6 205 aa19.49■□□□□ 0.71
SNX3-201ENST00000230085 FBRSQ9HAH7 460 aa19.49■□□□□ 0.71
SNX3-201ENST00000230085 CD93Q9NPY3 652 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms