RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 ACSM2AQ08AH3 577 aa16.81■□□□□ 0.28
CDKN1B-201ENST00000228872 TAF10Q12962 218 aa16.81■□□□□ 0.28
CDKN1B-201ENST00000228872 RIN1Q13671 783 aa16.81■□□□□ 0.28
CDKN1B-201ENST00000228872 COL28A1Q2UY09 1125 aa16.81■□□□□ 0.28
CDKN1B-201ENST00000228872 ACSM2BQ68CK6 577 aa16.81■□□□□ 0.28
CDKN1B-201ENST00000228872 TMEM107Q6UX40 140 aa16.81■□□□□ 0.28
CDKN1B-201ENST00000228872 CASP12Q6UXS9 341 aa16.81■□□□□ 0.28
CDKN1B-201ENST00000228872 TAS1R1Q7RTX1 841 aa16.81■□□□□ 0.28
CDKN1B-201ENST00000228872 IL17RCQ8NAC3 791 aa16.81■□□□□ 0.28
CDKN1B-201ENST00000228872 HJURPQ8NCD3 748 aaPredicted RBP16.81■□□□□ 0.28
CDKN1B-201ENST00000228872 MED28Q9H204 178 aa16.81■□□□□ 0.28
CDKN1B-201ENST00000228872 RANBP3Q9H6Z4 567 aaPredicted RBP16.81■□□□□ 0.28
CDKN1B-201ENST00000228872 UCKL1Q9NWZ5 548 aa16.81■□□□□ 0.28
CDKN1B-201ENST00000228872 SLC22A14Q9Y267 594 aa16.81■□□□□ 0.28
CDKN1B-201ENST00000228872 CHD5Q8TDI0 1954 aa16.81■□□□□ 0.28
CDKN1B-201ENST00000228872 AKAP8O43823 692 aaKnown RBP16.81■□□□□ 0.28
CDKN1B-201ENST00000228872 RAB36O95755 333 aa16.81■□□□□ 0.28
CDKN1B-201ENST00000228872 ITPKAP23677 461 aa16.81■□□□□ 0.28
CDKN1B-201ENST00000228872 CHIT1Q13231 466 aa16.81■□□□□ 0.28
CDKN1B-201ENST00000228872 LRRC32Q14392 662 aa16.81■□□□□ 0.28
CDKN1B-201ENST00000228872 BICRALQ6AI39 1079 aa16.81■□□□□ 0.28
CDKN1B-201ENST00000228872 TYW3Q6IPR3 259 aaKnown RBP16.81■□□□□ 0.28
CDKN1B-201ENST00000228872 UBE2R2Q712K3 238 aaPredicted RBP16.81■□□□□ 0.28
CDKN1B-201ENST00000228872 LRRC17Q8N6Y2 441 aa16.81■□□□□ 0.28
CDKN1B-201ENST00000228872 OR11H4Q8NGC9 324 aa16.81■□□□□ 0.28
CDKN1B-201ENST00000228872 OR8J1Q8NGP2 316 aa16.81■□□□□ 0.28
CDKN1B-201ENST00000228872 HUS1BQ8NHY5 278 aa16.81■□□□□ 0.28
CDKN1B-201ENST00000228872 PCNPQ8WW12 178 aaKnown RBP16.81■□□□□ 0.28
CDKN1B-201ENST00000228872 IGSF21Q96ID5 467 aa16.81■□□□□ 0.28
CDKN1B-201ENST00000228872 SORCS2Q96PQ0 1159 aa16.81■□□□□ 0.28
CDKN1B-201ENST00000228872 TM9SF2Q99805 663 aa16.81■□□□□ 0.28
CDKN1B-201ENST00000228872 ATF6BQ99941 703 aa16.81■□□□□ 0.28
CDKN1B-201ENST00000228872 LAMA2P24043 3122 aaKnown RBP16.8■□□□□ 0.28
CDKN1B-201ENST00000228872 TRBC2A0A5B9 178 aa16.8■□□□□ 0.28
CDKN1B-201ENST00000228872 TSPAN4O14817 238 aa16.8■□□□□ 0.28
CDKN1B-201ENST00000228872 SLC30A4O14863 429 aa16.8■□□□□ 0.28
CDKN1B-201ENST00000228872 PSIP1O75475 530 aaKnown RBP16.8■□□□□ 0.28
CDKN1B-201ENST00000228872 RECKO95980 971 aa16.8■□□□□ 0.28
CDKN1B-201ENST00000228872 BPIP17213 487 aa16.8■□□□□ 0.28
CDKN1B-201ENST00000228872 IDSP22304 550 aa16.8■□□□□ 0.28
CDKN1B-201ENST00000228872 CLCNKAP51800 687 aa16.8■□□□□ 0.28
CDKN1B-201ENST00000228872 EEF1A2Q05639 463 aaKnown RBP16.8■□□□□ 0.28
CDKN1B-201ENST00000228872 HEPACAMQ14CZ8 416 aa16.8■□□□□ 0.28
CDKN1B-201ENST00000228872 OCLNQ16625 522 aa16.8■□□□□ 0.28
CDKN1B-201ENST00000228872 MPPE1Q53F39 396 aa16.8■□□□□ 0.28
CDKN1B-201ENST00000228872 CLLU1Q5K131 121 aa16.8■□□□□ 0.28
CDKN1B-201ENST00000228872 PRSS42Q7Z5A4 293 aa16.8■□□□□ 0.28
CDKN1B-201ENST00000228872 PLA2G15Q8NCC3 412 aa16.8■□□□□ 0.28
CDKN1B-201ENST00000228872 EMC7Q9NPA0 242 aa16.8■□□□□ 0.28
CDKN1B-201ENST00000228872 KCTD5Q9NXV2 234 aa16.8■□□□□ 0.28
CDKN1B-201ENST00000228872 MKI67P46013 3256 aaKnown RBP16.8■□□□□ 0.28
CDKN1B-201ENST00000228872 CASKO14936 926 aa16.8■□□□□ 0.28
CDKN1B-201ENST00000228872 VNN2O95498 520 aa16.8■□□□□ 0.28
CDKN1B-201ENST00000228872 AVPR1BP47901 424 aa16.8■□□□□ 0.28
CDKN1B-201ENST00000228872 CDH4P55283 916 aa16.8■□□□□ 0.28
CDKN1B-201ENST00000228872 SRP54P61011 504 aaKnown RBP16.8■□□□□ 0.28
CDKN1B-201ENST00000228872 WDR5P61964 334 aaKnown RBP16.8■□□□□ 0.28
CDKN1B-201ENST00000228872 DDX39BQ13838 428 aaKnown RBP16.8■□□□□ 0.28
CDKN1B-201ENST00000228872 CRB2Q5IJ48 1285 aa16.8■□□□□ 0.28
CDKN1B-201ENST00000228872 C16orf62Q7Z3J2 963 aa16.8■□□□□ 0.28
CDKN1B-201ENST00000228872 CAMKMTQ7Z624 323 aa16.8■□□□□ 0.28
CDKN1B-201ENST00000228872 SENP5Q96HI0 755 aaPredicted RBP16.8■□□□□ 0.28
CDKN1B-201ENST00000228872 MTERF1Q99551 399 aaKnown RBP16.8■□□□□ 0.28
CDKN1B-201ENST00000228872 NT5DC2Q9H857 520 aa16.8■□□□□ 0.28
CDKN1B-201ENST00000228872 IL26Q9NPH9 171 aa16.8■□□□□ 0.28
CDKN1B-201ENST00000228872 DNAJC11Q9NVH1 559 aa16.8■□□□□ 0.28
CDKN1B-201ENST00000228872 CRLS1Q9UJA2 301 aa16.8■□□□□ 0.28
CDKN1B-201ENST00000228872 KCND3Q9UK17 655 aa16.8■□□□□ 0.28
CDKN1B-201ENST00000228872 TRBV5-4A0A0C4DH59 114 aa16.79■□□□□ 0.28
CDKN1B-201ENST00000228872 CARNS1A5YM72 827 aa16.79■□□□□ 0.28
CDKN1B-201ENST00000228872 H3BN98 237 aa16.79■□□□□ 0.28
CDKN1B-201ENST00000228872 FFAR1O14842 300 aa16.79■□□□□ 0.28
CDKN1B-201ENST00000228872 XKP51811 444 aa16.79■□□□□ 0.28
CDKN1B-201ENST00000228872 RAE1P78406 368 aaKnown RBP16.79■□□□□ 0.28
CDKN1B-201ENST00000228872 CDK6Q00534 326 aa16.79■□□□□ 0.28
CDKN1B-201ENST00000228872 FABP5Q01469 135 aa16.79■□□□□ 0.28
CDKN1B-201ENST00000228872 GRK1Q15835 563 aa16.79■□□□□ 0.28
CDKN1B-201ENST00000228872 LINGO4Q6UY18 593 aa16.79■□□□□ 0.28
CDKN1B-201ENST00000228872 OR11H7Q8NGC8 314 aa16.79■□□□□ 0.28
CDKN1B-201ENST00000228872 OR52N2Q8NGI0 321 aa16.79■□□□□ 0.28
CDKN1B-201ENST00000228872 GSTK1Q9Y2Q3 226 aa16.79■□□□□ 0.28
CDKN1B-201ENST00000228872 BACE2Q9Y5Z0 518 aa16.79■□□□□ 0.28
CDKN1B-201ENST00000228872 FZD6O60353 706 aa16.79■□□□□ 0.28
CDKN1B-201ENST00000228872 RHOCP08134 193 aa16.79■□□□□ 0.28
CDKN1B-201ENST00000228872 HOXD4P09016 255 aaPredicted RBP16.79■□□□□ 0.28
CDKN1B-201ENST00000228872 CBSLP0DN79 551 aa16.79■□□□□ 0.28
CDKN1B-201ENST00000228872 ICAM2P13598 275 aa16.79■□□□□ 0.28
CDKN1B-201ENST00000228872 CD22P20273 847 aa16.79■□□□□ 0.28
CDKN1B-201ENST00000228872 SLC6A1P30531 599 aa16.79■□□□□ 0.28
CDKN1B-201ENST00000228872 CBSP35520 551 aa16.79■□□□□ 0.28
CDKN1B-201ENST00000228872 CTBP2P56545 445 aa16.79■□□□□ 0.28
CDKN1B-201ENST00000228872 WNT4P56705 351 aa16.79■□□□□ 0.28
CDKN1B-201ENST00000228872 CTAG1AP78358 180 aa16.79■□□□□ 0.28
CDKN1B-201ENST00000228872 DEFB103AP81534 67 aa16.79■□□□□ 0.28
CDKN1B-201ENST00000228872 UBE3AQ05086 875 aa16.79■□□□□ 0.28
CDKN1B-201ENST00000228872 DUSP4Q13115 394 aa16.79■□□□□ 0.28
CDKN1B-201ENST00000228872 EXOSC2Q13868 293 aaKnown RBP16.79■□□□□ 0.28
CDKN1B-201ENST00000228872 GPR176Q14439 515 aa16.79■□□□□ 0.28
CDKN1B-201ENST00000228872 CCDC85BQ15834 202 aaPredicted RBP16.79■□□□□ 0.28
CDKN1B-201ENST00000228872 KLHL12Q53G59 568 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms