RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 PPM1BO75688 479 aa12.67□□□□□ -0.38
COL1A1-201ENST00000225964 APOL3O95236 402 aa12.67□□□□□ -0.38
COL1A1-201ENST00000225964 PORP16435 677 aaPredicted RBP12.67□□□□□ -0.38
COL1A1-201ENST00000225964 FRKP42685 505 aaPredicted RBP12.67□□□□□ -0.38
COL1A1-201ENST00000225964 EPHA4P54764 986 aa12.67□□□□□ -0.38
COL1A1-201ENST00000225964 NPY6RQ99463 290 aa12.67□□□□□ -0.38
COL1A1-201ENST00000225964 PAPOLGQ9BWT3 736 aaKnown RBP12.67□□□□□ -0.38
COL1A1-201ENST00000225964 ZNF395Q9H8N7 513 aaPredicted RBP12.67□□□□□ -0.38
COL1A1-201ENST00000225964 IFNA5P01569 189 aa12.67□□□□□ -0.38
COL1A1-201ENST00000225964 KLHDC10Q6PID8 442 aa12.67□□□□□ -0.38
COL1A1-201ENST00000225964 SNIP1Q8TAD8 396 aaKnown RBP12.67□□□□□ -0.38
COL1A1-201ENST00000225964 ZNF559Q9BR84 538 aa12.67□□□□□ -0.38
COL1A1-201ENST00000225964 OR51B6Q9H340 312 aa12.67□□□□□ -0.38
COL1A1-201ENST00000225964 PPP1R14DQ9NXH3 145 aa12.67□□□□□ -0.38
COL1A1-201ENST00000225964 ZNF175Q9Y473 711 aa12.67□□□□□ -0.38
COL1A1-201ENST00000225964 TEX264Q9Y6I9 313 aa12.67□□□□□ -0.38
COL1A1-201ENST00000225964 CCRL2O00421 344 aa12.67□□□□□ -0.38
COL1A1-201ENST00000225964 MAGEA3P43357 314 aa12.67□□□□□ -0.38
COL1A1-201ENST00000225964 PHC1P78364 1004 aa12.67□□□□□ -0.38
COL1A1-201ENST00000225964 PCLAFQ15004 111 aa12.67□□□□□ -0.38
COL1A1-201ENST00000225964 UBE2UQ5VVX9 321 aa12.67□□□□□ -0.38
COL1A1-201ENST00000225964 APCDD1Q8J025 514 aa12.67□□□□□ -0.38
COL1A1-201ENST00000225964 HORMAD2Q8N7B1 307 aa12.67□□□□□ -0.38
COL1A1-201ENST00000225964 SGTBQ96EQ0 304 aa12.67□□□□□ -0.38
COL1A1-201ENST00000225964 LRIG1Q96JA1 1093 aa12.67□□□□□ -0.38
COL1A1-201ENST00000225964 HERPUD2Q9BSE4 406 aa12.67□□□□□ -0.38
COL1A1-201ENST00000225964 RNF6Q9Y252 685 aa12.67□□□□□ -0.38
COL1A1-201ENST00000225964 TGM5O43548 720 aa12.67□□□□□ -0.38
COL1A1-201ENST00000225964 GKN3PP0CG01 181 aa12.67□□□□□ -0.38
COL1A1-201ENST00000225964 CD79AP11912 226 aa12.67□□□□□ -0.38
COL1A1-201ENST00000225964 CKMT1AP12532 417 aa12.67□□□□□ -0.38
COL1A1-201ENST00000225964 CLCA4Q14CN2 919 aa12.67□□□□□ -0.38
COL1A1-201ENST00000225964 PPP1R3AQ16821 1122 aa12.67□□□□□ -0.38
COL1A1-201ENST00000225964 EXOC3L2Q2M3D2 409 aa12.67□□□□□ -0.38
COL1A1-201ENST00000225964 NXPE4Q6UWF7 544 aa12.67□□□□□ -0.38
COL1A1-201ENST00000225964 ELMOD2Q8IZ81 293 aa12.67□□□□□ -0.38
COL1A1-201ENST00000225964 FBXL20Q96IG2 436 aa12.67□□□□□ -0.38
COL1A1-201ENST00000225964 HHIPQ96QV1 700 aa12.67□□□□□ -0.38
COL1A1-201ENST00000225964 GPR37L1O60883 481 aa12.66□□□□□ -0.38
COL1A1-201ENST00000225964 TIA1P31483 386 aaKnown RBP eCLIP12.66□□□□□ -0.38
COL1A1-201ENST00000225964 ASTE1Q2TB18 679 aaPredicted RBP12.66□□□□□ -0.38
COL1A1-201ENST00000225964 FAM205BPQ63HN1 556 aa12.66□□□□□ -0.38
COL1A1-201ENST00000225964 HMBOX1Q6NT76 420 aa12.66□□□□□ -0.38
COL1A1-201ENST00000225964 SLC22A16Q86VW1 577 aa12.66□□□□□ -0.38
COL1A1-201ENST00000225964 CREB3L4Q8TEY5 395 aa12.66□□□□□ -0.38
COL1A1-201ENST00000225964 LMAN1LQ9HAT1 526 aa12.66□□□□□ -0.38
COL1A1-201ENST00000225964 MAN2C1Q9NTJ4 1040 aa12.66□□□□□ -0.38
COL1A1-201ENST00000225964 C2orf42Q9NWW7 574 aa12.66□□□□□ -0.38
COL1A1-201ENST00000225964 DKK3Q9UBP4 350 aa12.66□□□□□ -0.38
COL1A1-201ENST00000225964 CD207Q9UJ71 328 aa12.66□□□□□ -0.38
COL1A1-201ENST00000225964 LCN1P31025 176 aa12.66□□□□□ -0.38
COL1A1-201ENST00000225964 RCAN2Q14206 197 aa12.66□□□□□ -0.38
COL1A1-201ENST00000225964 MSS51Q4VC12 460 aa12.66□□□□□ -0.38
COL1A1-201ENST00000225964 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.66□□□□□ -0.38
COL1A1-201ENST00000225964 ZNF689Q96CS4 500 aaPredicted RBP12.66□□□□□ -0.38
COL1A1-201ENST00000225964 URM1Q9BTM9 101 aaKnown RBP12.66□□□□□ -0.38
COL1A1-201ENST00000225964 MKLN1Q9UL63 735 aa12.66□□□□□ -0.38
COL1A1-201ENST00000225964 RPH3AQ9Y2J0 694 aaPredicted RBP12.66□□□□□ -0.38
COL1A1-201ENST00000225964 PMM2O15305 246 aa12.66□□□□□ -0.38
COL1A1-201ENST00000225964 ACTL6BO94805 426 aa12.66□□□□□ -0.38
COL1A1-201ENST00000225964 DNAJB1P25685 340 aa12.66□□□□□ -0.38
COL1A1-201ENST00000225964 FIGLAQ6QHK4 219 aa12.66□□□□□ -0.38
COL1A1-201ENST00000225964 TREX2Q9BQ50 279 aaPredicted RBP12.66□□□□□ -0.38
COL1A1-201ENST00000225964 ARHGAP39Q9C0H5 1083 aa12.66□□□□□ -0.38
COL1A1-201ENST00000225964 HHATLQ9HCP6 504 aa12.66□□□□□ -0.38
COL1A1-201ENST00000225964 FAAHO00519 579 aa12.66□□□□□ -0.38
COL1A1-201ENST00000225964 NPPAP01160 153 aa12.66□□□□□ -0.38
COL1A1-201ENST00000225964 GPX6P59796 221 aa12.66□□□□□ -0.38
COL1A1-201ENST00000225964 TMEM69Q5SWH9 247 aa12.66□□□□□ -0.38
COL1A1-201ENST00000225964 RPL13AP3Q6NVV1 102 aa12.66□□□□□ -0.38
COL1A1-201ENST00000225964 PHTF2Q8N3S3 785 aa12.66□□□□□ -0.38
COL1A1-201ENST00000225964 PRR18Q8N4B5 295 aa12.66□□□□□ -0.38
COL1A1-201ENST00000225964 GATAD2BQ8WXI9 593 aa12.66□□□□□ -0.38
COL1A1-201ENST00000225964 GCDHQ92947 438 aaPredicted RBP12.66□□□□□ -0.38
COL1A1-201ENST00000225964 AP1S3Q96PC3 154 aa12.66□□□□□ -0.38
COL1A1-201ENST00000225964 ACAD8Q9UKU7 415 aa12.66□□□□□ -0.38
COL1A1-201ENST00000225964 BCAS2O75934 225 aaPredicted RBP12.66□□□□□ -0.38
COL1A1-201ENST00000225964 DIRAS3O95661 229 aa12.66□□□□□ -0.38
COL1A1-201ENST00000225964 GPR4P46093 362 aa12.66□□□□□ -0.38
COL1A1-201ENST00000225964 PACRGLQ8N7B6 248 aa12.66□□□□□ -0.38
COL1A1-201ENST00000225964 RNF215Q9Y6U7 377 aa12.66□□□□□ -0.38
COL1A1-201ENST00000225964 CD8B2A6NJW9 211 aa12.66□□□□□ -0.38
COL1A1-201ENST00000225964 CD8BP10966 210 aa12.66□□□□□ -0.38
COL1A1-201ENST00000225964 APLNRP35414 380 aa12.66□□□□□ -0.38
COL1A1-201ENST00000225964 UGT2B10P36537 528 aa12.66□□□□□ -0.38
COL1A1-201ENST00000225964 LEPRP48357 1165 aaKnown RBP12.66□□□□□ -0.38
COL1A1-201ENST00000225964 DNAJB13P59910 316 aa12.66□□□□□ -0.38
COL1A1-201ENST00000225964 MVKQ03426 396 aa12.66□□□□□ -0.38
COL1A1-201ENST00000225964 DSC1Q08554 894 aa12.66□□□□□ -0.38
COL1A1-201ENST00000225964 ELAVL3Q14576 367 aaKnown RBP12.66□□□□□ -0.38
COL1A1-201ENST00000225964 TRAM1Q15629 374 aa12.66□□□□□ -0.38
COL1A1-201ENST00000225964 DEFB133Q30KQ1 61 aa12.66□□□□□ -0.38
COL1A1-201ENST00000225964 LEG1Q6P5S2 330 aa12.66□□□□□ -0.38
COL1A1-201ENST00000225964 UEVLDQ8IX04 471 aa12.66□□□□□ -0.38
COL1A1-201ENST00000225964 OR8K5Q8NH50 307 aa12.66□□□□□ -0.38
COL1A1-201ENST00000225964 AURKBQ96GD4 344 aaPredicted RBP12.66□□□□□ -0.38
COL1A1-201ENST00000225964 ADAMTS10Q9H324 1103 aa12.66□□□□□ -0.38
COL1A1-201ENST00000225964 KCNK12Q9HB15 430 aa12.66□□□□□ -0.38
COL1A1-201ENST00000225964 PTTG2Q9NZH5 202 aa12.66□□□□□ -0.38
COL1A1-201ENST00000225964 MAS1P04201 325 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms