RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 FUZQ9BT04 418 aa13.97□□□□□ -0.17
PTPRA-201ENST00000216877 MAP3K20Q9NYL2 800 aaKnown RBP13.97□□□□□ -0.17
PTPRA-201ENST00000216877 RFXAPO00287 272 aa13.97□□□□□ -0.17
PTPRA-201ENST00000216877 CACNG3O60359 315 aa13.97□□□□□ -0.17
PTPRA-201ENST00000216877 RP2O75695 350 aa13.97□□□□□ -0.17
PTPRA-201ENST00000216877 HMBSP08397 361 aa13.97□□□□□ -0.17
PTPRA-201ENST00000216877 C11orf88Q6PI97 169 aa13.97□□□□□ -0.17
PTPRA-201ENST00000216877 CRTC1Q6UUV9 634 aa13.97□□□□□ -0.17
PTPRA-201ENST00000216877 MBOAT1Q6ZNC8 495 aa13.97□□□□□ -0.17
PTPRA-201ENST00000216877 KCNJ9Q92806 393 aa13.97□□□□□ -0.17
PTPRA-201ENST00000216877 UPF1Q92900 1129 aaKnown RBP eCLIP13.97□□□□□ -0.17
PTPRA-201ENST00000216877 MSLNLQ96KJ4 702 aa13.97□□□□□ -0.17
PTPRA-201ENST00000216877 SPON2Q9BUD6 331 aa13.97□□□□□ -0.17
PTPRA-201ENST00000216877 CLMPQ9H6B4 373 aa13.97□□□□□ -0.17
PTPRA-201ENST00000216877 PPP1R3EQ9H7J1 279 aa13.97□□□□□ -0.17
PTPRA-201ENST00000216877 CTPS2Q9NRF8 586 aa13.97□□□□□ -0.17
PTPRA-201ENST00000216877 CTSFQ9UBX1 484 aa13.97□□□□□ -0.17
PTPRA-201ENST00000216877 METTL21EPA6NDL7 271 aa13.96□□□□□ -0.17
PTPRA-201ENST00000216877 POM121BA6NF01 834 aa13.96□□□□□ -0.17
PTPRA-201ENST00000216877 DNASE2O00115 360 aaPredicted RBP13.96□□□□□ -0.17
PTPRA-201ENST00000216877 GABRDO14764 452 aa13.96□□□□□ -0.17
PTPRA-201ENST00000216877 FGF18O76093 207 aa13.96□□□□□ -0.17
PTPRA-201ENST00000216877 LY86O95711 162 aa13.96□□□□□ -0.17
PTPRA-201ENST00000216877 TSTA3Q13630 321 aaPredicted RBP13.96□□□□□ -0.17
PTPRA-201ENST00000216877 CAMK1Q14012 370 aa13.96□□□□□ -0.17
PTPRA-201ENST00000216877 MELKQ14680 651 aa13.96□□□□□ -0.17
PTPRA-201ENST00000216877 ZNF628Q5EBL2 1059 aa13.96□□□□□ -0.17
PTPRA-201ENST00000216877 CBLN2Q8IUK8 224 aa13.96□□□□□ -0.17
PTPRA-201ENST00000216877 SYNPOQ8N3V7 929 aa13.96□□□□□ -0.17
PTPRA-201ENST00000216877 PSMG2Q969U7 264 aa13.96□□□□□ -0.17
PTPRA-201ENST00000216877 NDUFAF4Q9P032 175 aa13.96□□□□□ -0.17
PTPRA-201ENST00000216877 RPH3AQ9Y2J0 694 aaPredicted RBP13.96□□□□□ -0.17
PTPRA-201ENST00000216877 AUP1Q9Y679 476 aa13.96□□□□□ -0.17
PTPRA-201ENST00000216877 MYO9BQ13459 2157 aa13.96□□□□□ -0.17
PTPRA-201ENST00000216877 GASTP01350 101 aa13.96□□□□□ -0.17
PTPRA-201ENST00000216877 NMBP08949 121 aa13.96□□□□□ -0.17
PTPRA-201ENST00000216877 MICAQ29983 383 aa13.96□□□□□ -0.17
PTPRA-201ENST00000216877 MPPE1Q53F39 396 aa13.96□□□□□ -0.17
PTPRA-201ENST00000216877 IFI44LQ53G44 452 aa13.96□□□□□ -0.17
PTPRA-201ENST00000216877 FAM74A1Q5RGS3 127 aa13.96□□□□□ -0.17
PTPRA-201ENST00000216877 FKBP1CQ5VVH2 108 aa13.96□□□□□ -0.17
PTPRA-201ENST00000216877 CLEC20AQ6ZU45 233 aa13.96□□□□□ -0.17
PTPRA-201ENST00000216877 MEX3DQ86XN8 651 aaKnown RBP13.96□□□□□ -0.17
PTPRA-201ENST00000216877 GPRC5AQ8NFJ5 357 aa13.96□□□□□ -0.17
PTPRA-201ENST00000216877 NSMAFQ92636 917 aa13.96□□□□□ -0.17
PTPRA-201ENST00000216877 EPYCQ99645 322 aa13.96□□□□□ -0.17
PTPRA-201ENST00000216877 WDR77Q9BQA1 342 aaPredicted RBP13.96□□□□□ -0.17
PTPRA-201ENST00000216877 SLC19A3Q9BZV2 496 aa13.96□□□□□ -0.17
PTPRA-201ENST00000216877 A0A1B0GVI7 797 aa13.95□□□□□ -0.18
PTPRA-201ENST00000216877 SMAD9O15198 467 aaKnown RBP13.95□□□□□ -0.18
PTPRA-201ENST00000216877 ZNF623O75123 536 aa13.95□□□□□ -0.18
PTPRA-201ENST00000216877 RNF224P0DH78 156 aa13.95□□□□□ -0.18
PTPRA-201ENST00000216877 XPAP23025 273 aaPredicted RBP13.95□□□□□ -0.18
PTPRA-201ENST00000216877 SOAT1P35610 550 aa13.95□□□□□ -0.18
PTPRA-201ENST00000216877 DAOAP59103 153 aa13.95□□□□□ -0.18
PTPRA-201ENST00000216877 PURAQ00577 322 aaKnown RBP13.95□□□□□ -0.18
PTPRA-201ENST00000216877 HEPACAMQ14CZ8 416 aa13.95□□□□□ -0.18
PTPRA-201ENST00000216877 RAB11FIP2Q7L804 512 aa13.95□□□□□ -0.18
PTPRA-201ENST00000216877 GPR135Q8IZ08 494 aa13.95□□□□□ -0.18
PTPRA-201ENST00000216877 ZNF614Q8N883 585 aa13.95□□□□□ -0.18
PTPRA-201ENST00000216877 OR4A15Q8NGL6 344 aa13.95□□□□□ -0.18
PTPRA-201ENST00000216877 OR4K3Q96R72 315 aa13.95□□□□□ -0.18
PTPRA-201ENST00000216877 GMLQ99445 158 aa13.95□□□□□ -0.18
PTPRA-201ENST00000216877 DOHHQ9BU89 302 aa13.95□□□□□ -0.18
PTPRA-201ENST00000216877 TAPBPLQ9BX59 468 aa13.95□□□□□ -0.18
PTPRA-201ENST00000216877 IL20Q9NYY1 176 aa13.95□□□□□ -0.18
PTPRA-201ENST00000216877 KIF25Q9UIL4 384 aa13.95□□□□□ -0.18
PTPRA-201ENST00000216877 M0QZ92 97 aa13.95□□□□□ -0.18
PTPRA-201ENST00000216877 QSOX1O00391 747 aa13.95□□□□□ -0.18
PTPRA-201ENST00000216877 OR7A17O14581 309 aa13.95□□□□□ -0.18
PTPRA-201ENST00000216877 FFAR2O15552 330 aa13.95□□□□□ -0.18
PTPRA-201ENST00000216877 LDB2O43679 373 aa13.95□□□□□ -0.18
PTPRA-201ENST00000216877 TIAL1Q01085 375 aaKnown RBP eCLIP13.95□□□□□ -0.18
PTPRA-201ENST00000216877 FABP5Q01469 135 aa13.95□□□□□ -0.18
PTPRA-201ENST00000216877 KIAA0040Q15053 153 aa13.95□□□□□ -0.18
PTPRA-201ENST00000216877 CD276Q5ZPR3 534 aa13.95□□□□□ -0.18
PTPRA-201ENST00000216877 GLT6D1Q7Z4J2 308 aa13.95□□□□□ -0.18
PTPRA-201ENST00000216877 ARHGAP12Q8IWW6 846 aa13.95□□□□□ -0.18
PTPRA-201ENST00000216877 BVESQ8NE79 360 aa13.95□□□□□ -0.18
PTPRA-201ENST00000216877 NTAN1Q96AB6 310 aa13.95□□□□□ -0.18
PTPRA-201ENST00000216877 UROC1Q96N76 676 aa13.95□□□□□ -0.18
PTPRA-201ENST00000216877 OR2M2Q96R28 347 aa13.95□□□□□ -0.18
PTPRA-201ENST00000216877 NDUFB11Q9NX14 153 aa13.95□□□□□ -0.18
PTPRA-201ENST00000216877 SLCO1C1Q9NYB5 712 aa13.95□□□□□ -0.18
PTPRA-201ENST00000216877 CNOT2Q9NZN8 540 aaKnown RBP13.95□□□□□ -0.18
PTPRA-201ENST00000216877 POMT2Q9UKY4 750 aa13.95□□□□□ -0.18
PTPRA-201ENST00000216877 CHI3L1P36222 383 aaPredicted RBP13.95□□□□□ -0.18
PTPRA-201ENST00000216877 ETV5P41161 510 aa13.95□□□□□ -0.18
PTPRA-201ENST00000216877 AP1S2P56377 157 aa13.95□□□□□ -0.18
PTPRA-201ENST00000216877 BTG1P62324 171 aa13.95□□□□□ -0.18
PTPRA-201ENST00000216877 SMCO1Q147U7 214 aa13.95□□□□□ -0.18
PTPRA-201ENST00000216877 C9orf152Q5JTZ5 239 aa13.95□□□□□ -0.18
PTPRA-201ENST00000216877 IZUMO1Q8IYV9 350 aa13.95□□□□□ -0.18
PTPRA-201ENST00000216877 OR6J1Q8NGC5 347 aa13.95□□□□□ -0.18
PTPRA-201ENST00000216877 DNTTIP1Q9H147 329 aa13.95□□□□□ -0.18
PTPRA-201ENST00000216877 MIOXQ9UGB7 285 aa13.95□□□□□ -0.18
PTPRA-201ENST00000216877 GPR52Q9Y2T5 361 aa13.95□□□□□ -0.18
PTPRA-201ENST00000216877 HPXP02790 462 aa13.94□□□□□ -0.18
PTPRA-201ENST00000216877 HIST1H2AGP0C0S8 130 aaPredicted RBP13.94□□□□□ -0.18
PTPRA-201ENST00000216877 HIST1H2ADP20671 130 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms