RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 PIGGQ5H8A4 983 aa13.86□□□□□ -0.19
UPK3A-201ENST00000216211 NDUFAF5Q5TEU4 345 aa13.86□□□□□ -0.19
UPK3A-201ENST00000216211 MROH9Q5TGP6 573 aa13.86□□□□□ -0.19
UPK3A-201ENST00000216211 RGS9BPQ6ZS82 235 aa13.86□□□□□ -0.19
UPK3A-201ENST00000216211 CCDC71Q8IV32 467 aaPredicted RBP13.86□□□□□ -0.19
UPK3A-201ENST00000216211 C9orf40Q8IXQ3 194 aa13.86□□□□□ -0.19
UPK3A-201ENST00000216211 TMEM251Q8N6I4 163 aa13.86□□□□□ -0.19
UPK3A-201ENST00000216211 OR5M3Q8NGP4 307 aa13.86□□□□□ -0.19
UPK3A-201ENST00000216211 RND1Q92730 232 aa13.86□□□□□ -0.19
UPK3A-201ENST00000216211 SENP5Q96HI0 755 aaPredicted RBP13.86□□□□□ -0.19
UPK3A-201ENST00000216211 TREX2Q9BQ50 279 aaPredicted RBP13.86□□□□□ -0.19
UPK3A-201ENST00000216211 ACSS3Q9H6R3 686 aa13.86□□□□□ -0.19
UPK3A-201ENST00000216211 RPF2Q9H7B2 306 aaKnown RBP13.86□□□□□ -0.19
UPK3A-201ENST00000216211 IL1RL2Q9HB29 575 aa13.86□□□□□ -0.19
UPK3A-201ENST00000216211 DMRT3Q9NQL9 472 aa13.86□□□□□ -0.19
UPK3A-201ENST00000216211 TUBA8Q9NY65 449 aaPredicted RBP13.86□□□□□ -0.19
UPK3A-201ENST00000216211 TNFRSF10DQ9UBN6 386 aa13.86□□□□□ -0.19
UPK3A-201ENST00000216211 ADGRE2Q9UHX3 823 aa13.86□□□□□ -0.19
UPK3A-201ENST00000216211 ANGPTL3Q9Y5C1 460 aa13.86□□□□□ -0.19
UPK3A-201ENST00000216211 EXPH5Q8NEV8 1989 aa13.85□□□□□ -0.19
UPK3A-201ENST00000216211 A0A087X1B8 175 aa13.85□□□□□ -0.19
UPK3A-201ENST00000216211 EXOC1LA0A1B0GW35 172 aa13.85□□□□□ -0.19
UPK3A-201ENST00000216211 SMIM23A6NLE4 172 aa13.85□□□□□ -0.19
UPK3A-201ENST00000216211 SYCE1LA8MT33 242 aa13.85□□□□□ -0.19
UPK3A-201ENST00000216211 IGHG3P01860 377 aa13.85□□□□□ -0.19
UPK3A-201ENST00000216211 CELA3AP09093 270 aa13.85□□□□□ -0.19
UPK3A-201ENST00000216211 GFAPP14136 432 aa13.85□□□□□ -0.19
UPK3A-201ENST00000216211 GCAP28676 217 aa13.85□□□□□ -0.19
UPK3A-201ENST00000216211 PIGAP37287 484 aa13.85□□□□□ -0.19
UPK3A-201ENST00000216211 SLCO1A2P46721 670 aa13.85□□□□□ -0.19
UPK3A-201ENST00000216211 RPS13P62277 151 aaKnown RBP13.85□□□□□ -0.19
UPK3A-201ENST00000216211 PPP2R2AP63151 447 aa13.85□□□□□ -0.19
UPK3A-201ENST00000216211 TNFRSF17Q02223 184 aa13.85□□□□□ -0.19
UPK3A-201ENST00000216211 SETDB1Q15047 1291 aa13.85□□□□□ -0.19
UPK3A-201ENST00000216211 PFKFB4Q16877 469 aa13.85□□□□□ -0.19
UPK3A-201ENST00000216211 MPEG1Q2M385 716 aa13.85□□□□□ -0.19
UPK3A-201ENST00000216211 ZNF585AQ6P3V2 769 aa13.85□□□□□ -0.19
UPK3A-201ENST00000216211 GPR180Q86V85 440 aa13.85□□□□□ -0.19
UPK3A-201ENST00000216211 FAM109AQ8N4B1 249 aa13.85□□□□□ -0.19
UPK3A-201ENST00000216211 LILRB4Q8NHJ6 448 aa13.85□□□□□ -0.19
UPK3A-201ENST00000216211 RHEBL1Q8TAI7 183 aa13.85□□□□□ -0.19
UPK3A-201ENST00000216211 NUBPLQ8TB37 319 aa13.85□□□□□ -0.19
UPK3A-201ENST00000216211 TANKQ92844 425 aa13.85□□□□□ -0.19
UPK3A-201ENST00000216211 RBM18Q96H35 190 aaKnown RBP13.85□□□□□ -0.19
UPK3A-201ENST00000216211 SGCZQ96LD1 299 aa13.85□□□□□ -0.19
UPK3A-201ENST00000216211 SMC6Q96SB8 1091 aa13.85□□□□□ -0.19
UPK3A-201ENST00000216211 SEMA4BQ9NPR2 832 aaPredicted RBP13.85□□□□□ -0.19
UPK3A-201ENST00000216211 SNX15Q9NRS6 342 aa13.85□□□□□ -0.19
UPK3A-201ENST00000216211 MS4A12Q9NXJ0 267 aa13.85□□□□□ -0.19
UPK3A-201ENST00000216211 ATG4BQ9Y4P1 393 aa13.85□□□□□ -0.19
UPK3A-201ENST00000216211 ATP6AP2A0A1C7CYW4 349 aa13.84□□□□□ -0.19
UPK3A-201ENST00000216211 HMX2A2RU54 273 aa13.84□□□□□ -0.19
UPK3A-201ENST00000216211 WASHC1A8K0Z3 465 aa13.84□□□□□ -0.19
UPK3A-201ENST00000216211 DYRK3O43781 588 aa13.84□□□□□ -0.19
UPK3A-201ENST00000216211 EEDO75530 441 aaKnown RBP13.84□□□□□ -0.19
UPK3A-201ENST00000216211 ATP6AP2O75787 350 aa13.84□□□□□ -0.19
UPK3A-201ENST00000216211 NADKO95544 446 aaPredicted RBP13.84□□□□□ -0.19
UPK3A-201ENST00000216211 IGKV3-11P04433 115 aa13.84□□□□□ -0.19
UPK3A-201ENST00000216211 C2P06681 752 aa13.84□□□□□ -0.19
UPK3A-201ENST00000216211 ALOX15P16050 662 aaPredicted RBP13.84□□□□□ -0.19
UPK3A-201ENST00000216211 IGFBP2P18065 325 aa13.84□□□□□ -0.19
UPK3A-201ENST00000216211 PIK3CBP42338 1070 aa13.84□□□□□ -0.19
UPK3A-201ENST00000216211 PLIN5Q00G26 463 aa13.84□□□□□ -0.19
UPK3A-201ENST00000216211 TFF3Q07654 80 aa13.84□□□□□ -0.19
UPK3A-201ENST00000216211 FOXO1Q12778 655 aa13.84□□□□□ -0.19
UPK3A-201ENST00000216211 FAM83EQ2M2I3 478 aa13.84□□□□□ -0.19
UPK3A-201ENST00000216211 ZNF791Q3KP31 576 aaPredicted RBP13.84□□□□□ -0.19
UPK3A-201ENST00000216211 LIPJQ5W064 366 aa13.84□□□□□ -0.19
UPK3A-201ENST00000216211 TRILQ7L0X0 811 aa13.84□□□□□ -0.19
UPK3A-201ENST00000216211 ZCCHC7Q8N3Z6 543 aaKnown RBP13.84□□□□□ -0.19
UPK3A-201ENST00000216211 C7orf57Q8NEG2 295 aa13.84□□□□□ -0.19
UPK3A-201ENST00000216211 SLC22A8Q8TCC7 542 aa13.84□□□□□ -0.19
UPK3A-201ENST00000216211 ART5Q96L15 291 aa13.84□□□□□ -0.19
UPK3A-201ENST00000216211 CENPKQ9BS16 269 aa13.84□□□□□ -0.19
UPK3A-201ENST00000216211 ZNF717Q9BY31 904 aaPredicted RBP13.84□□□□□ -0.19
UPK3A-201ENST00000216211 LDAHQ9H6V9 325 aa13.84□□□□□ -0.19
UPK3A-201ENST00000216211 ACTR8Q9H981 624 aa13.84□□□□□ -0.19
UPK3A-201ENST00000216211 MCCC2Q9HCC0 563 aa13.84□□□□□ -0.19
UPK3A-201ENST00000216211 NPDC1Q9NQX5 325 aaPredicted RBP13.84□□□□□ -0.19
UPK3A-201ENST00000216211 PHF11Q9UIL8 331 aa13.84□□□□□ -0.19
UPK3A-201ENST00000216211 TSC22D4Q9Y3Q8 395 aa13.84□□□□□ -0.19
UPK3A-201ENST00000216211 PCDHGA11Q9Y5H2 935 aa13.84□□□□□ -0.19
UPK3A-201ENST00000216211 CCDC168Q8NDH2 2452 aa13.83□□□□□ -0.2
UPK3A-201ENST00000216211 A0A1B0GVC2 190 aa13.83□□□□□ -0.2
UPK3A-201ENST00000216211 OR14I1A6ND48 311 aa13.83□□□□□ -0.2
UPK3A-201ENST00000216211 GLOD5A6NK44 160 aa13.83□□□□□ -0.2
UPK3A-201ENST00000216211 BCKDKO14874 412 aa13.83□□□□□ -0.2
UPK3A-201ENST00000216211 PROM1O43490 865 aa13.83□□□□□ -0.2
UPK3A-201ENST00000216211 SHOX2O60902 331 aaPredicted RBP13.83□□□□□ -0.2
UPK3A-201ENST00000216211 TOXO94900 526 aa13.83□□□□□ -0.2
UPK3A-201ENST00000216211 KLHL2O95198 593 aa13.83□□□□□ -0.2
UPK3A-201ENST00000216211 CAPN3P20807 821 aa13.83□□□□□ -0.2
UPK3A-201ENST00000216211 PTX3P26022 381 aaPredicted RBP13.83□□□□□ -0.2
UPK3A-201ENST00000216211 ACVR2AP27037 513 aa13.83□□□□□ -0.2
UPK3A-201ENST00000216211 TLX1P31314 330 aaPredicted RBP13.83□□□□□ -0.2
UPK3A-201ENST00000216211 BSGP35613 385 aa13.83□□□□□ -0.2
UPK3A-201ENST00000216211 BUD31P41223 144 aaPredicted RBP13.83□□□□□ -0.2
UPK3A-201ENST00000216211 MAN2A2P49641 1150 aa13.83□□□□□ -0.2
UPK3A-201ENST00000216211 ALDH18A1P54886 795 aaKnown RBP13.83□□□□□ -0.2
UPK3A-201ENST00000216211 HERVK_113P63132 956 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms