RNA–Protein interactions for RNA: ENST00000200181.7

ITGB4-201, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene ITGB4, Length 5,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-201ENST00000200181 ADRB3P13945 408 aa16.47■□□□□ 0.23
ITGB4-201ENST00000200181 PREPP48147 710 aa16.47■□□□□ 0.23
ITGB4-201ENST00000200181 RGS6P49758 472 aa16.47■□□□□ 0.23
ITGB4-201ENST00000200181 RNF144AP50876 292 aaPredicted RBP16.47■□□□□ 0.23
ITGB4-201ENST00000200181 GPR143P51810 404 aa16.47■□□□□ 0.23
ITGB4-201ENST00000200181 CCDC106Q9BWC9 280 aa16.47■□□□□ 0.23
ITGB4-201ENST00000200181 DNAJC5Q9H3Z4 198 aa16.47■□□□□ 0.23
ITGB4-201ENST00000200181 HHLA1C9JL84 531 aa16.47■□□□□ 0.23
ITGB4-201ENST00000200181 H3BUI4 141 aa16.47■□□□□ 0.23
ITGB4-201ENST00000200181 C7P10643 843 aa16.47■□□□□ 0.23
ITGB4-201ENST00000200181 LRIT3Q3SXY7 679 aa16.47■□□□□ 0.23
ITGB4-201ENST00000200181 GPRC6AQ5T6X5 926 aa16.47■□□□□ 0.23
ITGB4-201ENST00000200181 CES4AQ5XG92 561 aa16.47■□□□□ 0.23
ITGB4-201ENST00000200181 ANKRD54Q6NXT1 300 aa16.47■□□□□ 0.23
ITGB4-201ENST00000200181 OR51A7Q8NH64 312 aa16.47■□□□□ 0.23
ITGB4-201ENST00000200181 TSPEARQ8WU66 669 aa16.47■□□□□ 0.23
ITGB4-201ENST00000200181 CNN2Q99439 309 aaKnown RBP16.47■□□□□ 0.23
ITGB4-201ENST00000200181 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.47■□□□□ 0.23
ITGB4-201ENST00000200181 KLHL21Q9UJP4 597 aa16.47■□□□□ 0.23
ITGB4-201ENST00000200181 SOBPA7XYQ1 873 aa16.47■□□□□ 0.23
ITGB4-201ENST00000200181 STSP08842 583 aa16.47■□□□□ 0.23
ITGB4-201ENST00000200181 SPHARQ15513 63 aa16.47■□□□□ 0.23
ITGB4-201ENST00000200181 RNASE10Q5GAN6 216 aaKnown RBP16.47■□□□□ 0.23
ITGB4-201ENST00000200181 ESX1Q8N693 406 aa16.47■□□□□ 0.23
ITGB4-201ENST00000200181 PCDHB3Q9Y5E6 796 aa16.47■□□□□ 0.23
ITGB4-201ENST00000200181 NRP1O14786 923 aa16.46■□□□□ 0.23
ITGB4-201ENST00000200181 HTR1EP28566 365 aa16.46■□□□□ 0.23
ITGB4-201ENST00000200181 AKR1C2P52895 323 aa16.46■□□□□ 0.23
ITGB4-201ENST00000200181 LIPJQ5W064 366 aa16.46■□□□□ 0.23
ITGB4-201ENST00000200181 FTMTQ8N4E7 242 aa16.46■□□□□ 0.23
ITGB4-201ENST00000200181 ZNF382Q96SR6 550 aa16.46■□□□□ 0.23
ITGB4-201ENST00000200181 FBRSQ9HAH7 460 aa16.46■□□□□ 0.23
ITGB4-201ENST00000200181 SRA1Q9HD15 236 aaKnown RBP16.46■□□□□ 0.23
ITGB4-201ENST00000200181 TMEM100Q9NV29 134 aa16.46■□□□□ 0.23
ITGB4-201ENST00000200181 EBF1Q9UH73 591 aa16.46■□□□□ 0.23
ITGB4-201ENST00000200181 GCGRP47871 477 aa16.46■□□□□ 0.23
ITGB4-201ENST00000200181 GABARAPL2P60520 117 aa16.46■□□□□ 0.23
ITGB4-201ENST00000200181 SLC25A11Q02978 314 aaKnown RBP16.46■□□□□ 0.23
ITGB4-201ENST00000200181 RBM39Q14498 530 aaKnown RBP16.46■□□□□ 0.23
ITGB4-201ENST00000200181 PLEKHS1Q5SXH7 462 aa16.46■□□□□ 0.23
ITGB4-201ENST00000200181 ERCC6L2Q5T890 1561 aa16.46■□□□□ 0.23
ITGB4-201ENST00000200181 ELP2Q6IA86 826 aa16.46■□□□□ 0.23
ITGB4-201ENST00000200181 NUP43Q8NFH3 380 aa16.46■□□□□ 0.23
ITGB4-201ENST00000200181 DEDD2Q8WXF8 326 aa16.46■□□□□ 0.23
ITGB4-201ENST00000200181 CCM2LQ9NUG4 571 aaPredicted RBP16.46■□□□□ 0.23
ITGB4-201ENST00000200181 SLC22A31A6NKX4 558 aa16.46■□□□□ 0.23
ITGB4-201ENST00000200181 A6NLC8 198 aa16.46■□□□□ 0.23
ITGB4-201ENST00000200181 LILRB5O75023 590 aa16.46■□□□□ 0.23
ITGB4-201ENST00000200181 CNTN5O94779 1100 aa16.46■□□□□ 0.23
ITGB4-201ENST00000200181 C10orf62Q5T681 223 aaPredicted RBP16.46■□□□□ 0.23
ITGB4-201ENST00000200181 OR8J1Q8NGP2 316 aa16.46■□□□□ 0.23
ITGB4-201ENST00000200181 ZNF516Q92618 1163 aa16.46■□□□□ 0.23
ITGB4-201ENST00000200181 GNG13Q9P2W3 67 aa16.46■□□□□ 0.23
ITGB4-201ENST00000200181 POU3F4P49335 361 aa16.46■□□□□ 0.23
ITGB4-201ENST00000200181 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.46■□□□□ 0.23
ITGB4-201ENST00000200181 METTL27Q8N6F8 245 aaPredicted RBP16.46■□□□□ 0.23
ITGB4-201ENST00000200181 TRIB2Q92519 343 aa16.46■□□□□ 0.23
ITGB4-201ENST00000200181 RBCK1Q9BYM8 510 aa16.46■□□□□ 0.23
ITGB4-201ENST00000200181 SMOC2Q9H3U7 446 aa16.46■□□□□ 0.23
ITGB4-201ENST00000200181 RNF215Q9Y6U7 377 aa16.46■□□□□ 0.23
ITGB4-201ENST00000200181 PMM2O15305 246 aa16.46■□□□□ 0.22
ITGB4-201ENST00000200181 GGT2P36268 569 aa16.46■□□□□ 0.22
ITGB4-201ENST00000200181 MALLQ13021 153 aa16.46■□□□□ 0.22
ITGB4-201ENST00000200181 C6orf136Q5SQH8 315 aa16.46■□□□□ 0.22
ITGB4-201ENST00000200181 C22orf39Q6P5X5 142 aa16.46■□□□□ 0.22
ITGB4-201ENST00000200181 ASRGL1Q7L266 308 aa16.46■□□□□ 0.22
ITGB4-201ENST00000200181 WDR53Q7Z5U6 358 aaPredicted RBP16.46■□□□□ 0.22
ITGB4-201ENST00000200181 KRTCAP2Q8N6L1 136 aa16.46■□□□□ 0.22
ITGB4-201ENST00000200181 SLC45A3Q96JT2 553 aa16.46■□□□□ 0.22
ITGB4-201ENST00000200181 CDC6Q99741 560 aa16.46■□□□□ 0.22
ITGB4-201ENST00000200181 HINT2Q9BX68 163 aa16.46■□□□□ 0.22
ITGB4-201ENST00000200181 CACNG6Q9BXT2 260 aa16.46■□□□□ 0.22
ITGB4-201ENST00000200181 A8MVJ9 347 aa16.45■□□□□ 0.22
ITGB4-201ENST00000200181 SCO2O43819 266 aa16.45■□□□□ 0.22
ITGB4-201ENST00000200181 AMY2AP04746 511 aa16.45■□□□□ 0.22
ITGB4-201ENST00000200181 TYRP1P17643 537 aa16.45■□□□□ 0.22
ITGB4-201ENST00000200181 DIO3P55073 304 aa16.45■□□□□ 0.22
ITGB4-201ENST00000200181 GK2Q14410 553 aaPredicted RBP16.45■□□□□ 0.22
ITGB4-201ENST00000200181 ZC3H14Q6PJT7 736 aaKnown RBP16.45■□□□□ 0.22
ITGB4-201ENST00000200181 CELF5Q8N6W0 485 aaKnown RBP16.45■□□□□ 0.22
ITGB4-201ENST00000200181 SLAIN1Q8ND83 568 aa16.45■□□□□ 0.22
ITGB4-201ENST00000200181 OR5H2Q8NGV7 314 aa16.45■□□□□ 0.22
ITGB4-201ENST00000200181 PXYLP1Q8TE99 480 aa16.45■□□□□ 0.22
ITGB4-201ENST00000200181 TAS2R8Q9NYW2 309 aa16.45■□□□□ 0.22
ITGB4-201ENST00000200181 PCTPQ9UKL6 214 aa16.45■□□□□ 0.22
ITGB4-201ENST00000200181 CCDC85CA6NKD9 419 aa16.45■□□□□ 0.22
ITGB4-201ENST00000200181 TP53I11O14683 189 aa16.45■□□□□ 0.22
ITGB4-201ENST00000200181 ZNF254O75437 659 aa16.45■□□□□ 0.22
ITGB4-201ENST00000200181 THBS2P35442 1172 aa16.45■□□□□ 0.22
ITGB4-201ENST00000200181 RBM12BQ8IXT5 1001 aaKnown RBP16.45■□□□□ 0.22
ITGB4-201ENST00000200181 RRNAD1Q96FB5 475 aaKnown RBP16.45■□□□□ 0.22
ITGB4-201ENST00000200181 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.45■□□□□ 0.22
ITGB4-201ENST00000200181 SACM1LQ9NTJ5 587 aa16.45■□□□□ 0.22
ITGB4-201ENST00000200181 FGF3P11487 239 aaPredicted RBP16.45■□□□□ 0.22
ITGB4-201ENST00000200181 POLR2CP19387 275 aaPredicted RBP16.45■□□□□ 0.22
ITGB4-201ENST00000200181 KCNQ1P51787 676 aa16.45■□□□□ 0.22
ITGB4-201ENST00000200181 GALNT2Q10471 571 aa16.45■□□□□ 0.22
ITGB4-201ENST00000200181 EOGTQ5NDL2 527 aa16.45■□□□□ 0.22
ITGB4-201ENST00000200181 TXNDC5Q8NBS9 432 aaKnown RBP16.45■□□□□ 0.22
ITGB4-201ENST00000200181 KCNIP1Q9NZI2 227 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms