RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 MROH9Q5TGP6 573 aa14.63□□□□□ -0.07
ERCC1-201ENST00000013807 B3GNT6Q6ZMB0 384 aa14.63□□□□□ -0.07
ERCC1-201ENST00000013807 CCDC25Q86WR0 208 aa14.63□□□□□ -0.07
ERCC1-201ENST00000013807 RELL1Q8IUW5 271 aa14.63□□□□□ -0.07
ERCC1-201ENST00000013807 CCDC71Q8IV32 467 aaPredicted RBP14.63□□□□□ -0.07
ERCC1-201ENST00000013807 FBXW8Q8N3Y1 598 aa14.63□□□□□ -0.07
ERCC1-201ENST00000013807 OR5M3Q8NGP4 307 aa14.63□□□□□ -0.07
ERCC1-201ENST00000013807 ANP32BQ92688 251 aaKnown RBP14.63□□□□□ -0.07
ERCC1-201ENST00000013807 TP53INP1Q96A56 240 aa14.63□□□□□ -0.07
ERCC1-201ENST00000013807 PPWD1Q96BP3 646 aaKnown RBP14.63□□□□□ -0.07
ERCC1-201ENST00000013807 UCK2Q9BZX2 261 aa14.63□□□□□ -0.07
ERCC1-201ENST00000013807 ACTR8Q9H981 624 aa14.63□□□□□ -0.07
ERCC1-201ENST00000013807 SEMA4BQ9NPR2 832 aaPredicted RBP14.63□□□□□ -0.07
ERCC1-201ENST00000013807 SNX15Q9NRS6 342 aa14.63□□□□□ -0.07
ERCC1-201ENST00000013807 ZDHHC18Q9NUE0 388 aa14.63□□□□□ -0.07
ERCC1-201ENST00000013807 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.63□□□□□ -0.07
ERCC1-201ENST00000013807 A0A096LPK6 155 aa14.62□□□□□ -0.07
ERCC1-201ENST00000013807 NKX2-6A6NCS4 301 aa14.62□□□□□ -0.07
ERCC1-201ENST00000013807 EEDO75530 441 aaKnown RBP14.62□□□□□ -0.07
ERCC1-201ENST00000013807 SEMA3DO95025 777 aa14.62□□□□□ -0.07
ERCC1-201ENST00000013807 ALDOAP04075 364 aaKnown RBP14.62□□□□□ -0.07
ERCC1-201ENST00000013807 CLPSP04118 112 aa14.62□□□□□ -0.07
ERCC1-201ENST00000013807 FAM58BPP0C7Q3 252 aa14.62□□□□□ -0.07
ERCC1-201ENST00000013807 SLC35E2P0CK97 266 aa14.62□□□□□ -0.07
ERCC1-201ENST00000013807 SERPINB3P29508 390 aa14.62□□□□□ -0.07
ERCC1-201ENST00000013807 CASQ1P31415 396 aa14.62□□□□□ -0.07
ERCC1-201ENST00000013807 PIGAP37287 484 aa14.62□□□□□ -0.07
ERCC1-201ENST00000013807 MAN2A2P49641 1150 aa14.62□□□□□ -0.07
ERCC1-201ENST00000013807 PHEXP78562 749 aa14.62□□□□□ -0.07
ERCC1-201ENST00000013807 IRF9Q00978 393 aa14.62□□□□□ -0.07
ERCC1-201ENST00000013807 GTF2H2Q13888 395 aa14.62□□□□□ -0.07
ERCC1-201ENST00000013807 EBPQ15125 230 aaKnown RBP14.62□□□□□ -0.07
ERCC1-201ENST00000013807 GTF2H2CQ6P1K8 395 aa14.62□□□□□ -0.07
ERCC1-201ENST00000013807 ZNF441Q8N8Z8 693 aa14.62□□□□□ -0.07
ERCC1-201ENST00000013807 RIT1Q92963 219 aa14.62□□□□□ -0.07
ERCC1-201ENST00000013807 ISL2Q96A47 359 aa14.62□□□□□ -0.07
ERCC1-201ENST00000013807 NTNG2Q96CW9 530 aa14.62□□□□□ -0.07
ERCC1-201ENST00000013807 NTMT1Q9BV86 223 aa14.62□□□□□ -0.07
ERCC1-201ENST00000013807 WWTR1Q9GZV5 400 aa14.62□□□□□ -0.07
ERCC1-201ENST00000013807 ZNF703Q9H7S9 590 aaPredicted RBP14.62□□□□□ -0.07
ERCC1-201ENST00000013807 IPPKQ9H8X2 491 aa14.62□□□□□ -0.07
ERCC1-201ENST00000013807 ZFP64Q9NPA5 681 aa14.62□□□□□ -0.07
ERCC1-201ENST00000013807 ANGPTL3Q9Y5C1 460 aa14.62□□□□□ -0.07
ERCC1-201ENST00000013807 DOCK7Q96N67 2140 aa14.62□□□□□ -0.07
ERCC1-201ENST00000013807 TRGV5A0A0B4J1U4 118 aa14.61□□□□□ -0.07
ERCC1-201ENST00000013807 IQANK1A0A1B0GTG1 560 aa14.61□□□□□ -0.07
ERCC1-201ENST00000013807 WASHC1A8K0Z3 465 aa14.61□□□□□ -0.07
ERCC1-201ENST00000013807 FAM47E-STBD1D6RA91 191 aa14.61□□□□□ -0.07
ERCC1-201ENST00000013807 CELA3AP09093 270 aa14.61□□□□□ -0.07
ERCC1-201ENST00000013807 GFAPP14136 432 aa14.61□□□□□ -0.07
ERCC1-201ENST00000013807 GABRA1P14867 456 aa14.61□□□□□ -0.07
ERCC1-201ENST00000013807 ENDOUP21128 410 aaKnown RBP14.61□□□□□ -0.07
ERCC1-201ENST00000013807 ZFP36L2P47974 494 aaKnown RBP14.61□□□□□ -0.07
ERCC1-201ENST00000013807 HERVK_113P63132 956 aa14.61□□□□□ -0.07
ERCC1-201ENST00000013807 ERVK-8P63133 956 aa14.61□□□□□ -0.07
ERCC1-201ENST00000013807 DDX39BQ13838 428 aaKnown RBP14.61□□□□□ -0.07
ERCC1-201ENST00000013807 CPSF6Q16630 551 aaKnown RBP eCLIP14.61□□□□□ -0.07
ERCC1-201ENST00000013807 TBCELQ5QJ74 424 aa14.61□□□□□ -0.07
ERCC1-201ENST00000013807 WLSQ5T9L3 541 aa14.61□□□□□ -0.07
ERCC1-201ENST00000013807 ZNF585AQ6P3V2 769 aa14.61□□□□□ -0.07
ERCC1-201ENST00000013807 RNF111Q6ZNA4 994 aa14.61□□□□□ -0.07
ERCC1-201ENST00000013807 SLC29A4Q7RTT9 530 aa14.61□□□□□ -0.07
ERCC1-201ENST00000013807 GOLGA7Q7Z5G4 137 aa14.61□□□□□ -0.07
ERCC1-201ENST00000013807 CDH24Q86UP0 819 aa14.61□□□□□ -0.07
ERCC1-201ENST00000013807 SECISBP2Q96T21 854 aaKnown RBP14.61□□□□□ -0.07
ERCC1-201ENST00000013807 ERVK-6Q9BXR3 956 aa14.61□□□□□ -0.07
ERCC1-201ENST00000013807 ADAM29Q9UKF5 820 aa14.61□□□□□ -0.07
ERCC1-201ENST00000013807 CNOT11Q9UKZ1 510 aaKnown RBP14.61□□□□□ -0.07
ERCC1-201ENST00000013807 BOKQ9UMX3 212 aaPredicted RBP14.61□□□□□ -0.07
ERCC1-201ENST00000013807 ERVK-19Q9WJR5 959 aa14.61□□□□□ -0.07
ERCC1-201ENST00000013807 ABCA4P78363 2273 aa14.61□□□□□ -0.07
ERCC1-201ENST00000013807 HRNRQ86YZ3 2850 aaPredicted RBP14.6□□□□□ -0.07
ERCC1-201ENST00000013807 A0A0G2JNJ9 132 aa14.6□□□□□ -0.07
ERCC1-201ENST00000013807 ATP6AP2A0A1C7CYW4 349 aa14.6□□□□□ -0.07
ERCC1-201ENST00000013807 LRRC14BA6NHZ5 514 aa14.6□□□□□ -0.07
ERCC1-201ENST00000013807 LRRC3CA6NJW4 275 aa14.6□□□□□ -0.07
ERCC1-201ENST00000013807 OR7A17O14581 309 aa14.6□□□□□ -0.07
ERCC1-201ENST00000013807 TRIM3O75382 744 aaPredicted RBP14.6□□□□□ -0.07
ERCC1-201ENST00000013807 PRKRAO75569 313 aaKnown RBP14.6□□□□□ -0.07
ERCC1-201ENST00000013807 ATP6AP2O75787 350 aa14.6□□□□□ -0.07
ERCC1-201ENST00000013807 CLDN9O95484 217 aa14.6□□□□□ -0.07
ERCC1-201ENST00000013807 RFPL3SP0C7P2 107 aa14.6□□□□□ -0.07
ERCC1-201ENST00000013807 NR2F6P10588 404 aa14.6□□□□□ -0.07
ERCC1-201ENST00000013807 TYK2P29597 1187 aa14.6□□□□□ -0.07
ERCC1-201ENST00000013807 MAGEA12P43365 314 aa14.6□□□□□ -0.07
ERCC1-201ENST00000013807 RIPPLY3P57055 190 aa14.6□□□□□ -0.07
ERCC1-201ENST00000013807 FUT7Q11130 342 aa14.6□□□□□ -0.07
ERCC1-201ENST00000013807 ZNF267Q14586 743 aaPredicted RBP14.6□□□□□ -0.07
ERCC1-201ENST00000013807 TECRLQ5HYJ1 363 aa14.6□□□□□ -0.07
ERCC1-201ENST00000013807 RIPPLY2Q5TAB7 128 aa14.6□□□□□ -0.07
ERCC1-201ENST00000013807 KLC3Q6P597 504 aa14.6□□□□□ -0.07
ERCC1-201ENST00000013807 NUDT13Q86X67 352 aa14.6□□□□□ -0.07
ERCC1-201ENST00000013807 CLYBLQ8N0X4 340 aa14.6□□□□□ -0.07
ERCC1-201ENST00000013807 C17orf47Q8NEP4 570 aa14.6□□□□□ -0.07
ERCC1-201ENST00000013807 OR10G3Q8NGC4 313 aa14.6□□□□□ -0.07
ERCC1-201ENST00000013807 OR5M9Q8NGP3 310 aa14.6□□□□□ -0.07
ERCC1-201ENST00000013807 NEIL3Q8TAT5 605 aa14.6□□□□□ -0.07
ERCC1-201ENST00000013807 SERPINI1Q99574 410 aa14.6□□□□□ -0.07
ERCC1-201ENST00000013807 ACSS3Q9H6R3 686 aa14.6□□□□□ -0.07
ERCC1-201ENST00000013807 WDR41Q9HAD4 459 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms