RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 TBPL1P62380 186 aa10□□□□□ -0.81
CX3CL1-201ENST00000006053 QPRTQ15274 297 aa10□□□□□ -0.81
CX3CL1-201ENST00000006053 ZNF770Q6IQ21 691 aaPredicted RBP10□□□□□ -0.81
CX3CL1-201ENST00000006053 REEP3Q6NUK4 255 aa10□□□□□ -0.81
CX3CL1-201ENST00000006053 GDPGP1Q6ZNW5 385 aa10□□□□□ -0.81
CX3CL1-201ENST00000006053 VWA5B2Q8N398 1253 aa10□□□□□ -0.81
CX3CL1-201ENST00000006053 FAM109AQ8N4B1 249 aa10□□□□□ -0.81
CX3CL1-201ENST00000006053 NANOGP1Q8N7R0 232 aa10□□□□□ -0.81
CX3CL1-201ENST00000006053 VOPP1Q96AW1 172 aa10□□□□□ -0.81
CX3CL1-201ENST00000006053 SMG9Q9H0W8 520 aaKnown RBP10□□□□□ -0.81
CX3CL1-201ENST00000006053 ELAC1Q9H777 363 aaKnown RBP10□□□□□ -0.81
CX3CL1-201ENST00000006053 COMMD3Q9UBI1 195 aa10□□□□□ -0.81
CX3CL1-201ENST00000006053 REV1Q9UBZ9 1251 aa10□□□□□ -0.81
CX3CL1-201ENST00000006053 HEPACAM2A8MVW5 462 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 PQBP1O60828 265 aaKnown RBP9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 CCNYL3P0C7X3 344 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 KIR2DL3P43628 341 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 NOGQ13253 232 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 ELOAQ14241 798 aaKnown RBP9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 COL19A1Q14993 1142 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 MPPE1Q53F39 396 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 MEDAGQ5VYS4 303 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 ERAP2Q6P179 960 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 VN1R5Q7Z5H4 357 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 C11orf96Q7Z7L8 435 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 HMGN2P46Q86SG4 172 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 ZNF740Q8NDX6 193 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 CXorf40BQ96DE9 158 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 SPNS1Q9H2V7 528 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 CXorf36Q9H7Y0 433 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 RNF121Q9H920 327 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 ATP13A2Q9NQ11 1180 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 CTPS2Q9NRF8 586 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 SEMA3GQ9NS98 782 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 NDUFB11Q9NX14 153 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 DYRK1BQ9Y463 629 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 UNC80Q8N2C7 3258 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 TET1Q8NFU7 2136 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 FAM25AB3EWG3 89 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 FAM25CB3EWG5 89 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 FAM25GB3EWG6 89 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 POP4O95707 220 aaKnown RBP9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 LATS1O95835 1130 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 ELAVL4P26378 380 aaKnown RBP9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 GABRR2P28476 465 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 HLA-FP30511 346 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 SNRPGP62308 76 aaKnown RBP9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 ILKQ13418 452 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 TCTN1Q2MV58 587 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 DDI2Q5TDH0 399 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 OR2G6Q5TZ20 316 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 ZDHHC20Q5W0Z9 365 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 TYW3Q6IPR3 259 aaKnown RBP9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 XKRXQ6PP77 449 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 TMEM220Q6QAJ8 160 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 DEFB128Q7Z7B8 93 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 ABI3BPQ7Z7G0 1075 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 HORMAD2Q8N7B1 307 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 ZFP41Q8N8Y5 198 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 RASGEF1AQ8N9B8 481 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 ATP6V1C2Q8NEY4 427 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 PROKR2Q8NFJ6 384 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 OR56A3Q8NH54 315 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 FIBINQ8TAL6 211 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 CREB3L4Q8TEY5 395 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 ZNF480Q8WV37 535 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 SLC25A46Q96AG3 418 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 REPS1Q96D71 796 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 TMEM19Q96HH6 336 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 WDFY2Q96P53 400 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 RACGAP1Q9H0H5 632 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 DMRT3Q9NQL9 472 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 C5AR2Q9P296 337 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 CDH23Q9H251 3354 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 PLXNB3Q9ULL4 1909 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 A0A0B4J293 547 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 IQCMA0A1B0GVH7 501 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 H1F0P07305 194 aaKnown RBP9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 PSKH1P11801 424 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 ICAM2P13598 275 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 SELPP16109 830 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 APEX1P27695 318 aaKnown RBP9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 PKLRP30613 574 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 DGKGP49619 791 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 EPHB3P54753 998 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 MLLT11Q13015 90 aaPredicted RBP9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 SNTA1Q13424 505 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 ASAH1Q13510 395 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 GLYR1Q49A26 553 aaPredicted RBP9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 CRTC2Q53ET0 693 aaPredicted RBP9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 FAM71E1Q6IPT2 247 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 TCTN3Q6NUS6 607 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 PLET1Q6UQ28 207 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 KCTD20Q7Z5Y7 419 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 MEX3DQ86XN8 651 aaKnown RBP9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 GPR32P1Q8NGA4 272 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 OR8J1Q8NGP2 316 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 SLC38A5Q8WUX1 472 aa9.99□□□□□ -0.81
CX3CL1-201ENST00000006053 RNF31Q96EP0 1072 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms