RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 K7ESM1 405 aa13.31□□□□□ -0.28
USH1C-201ENST00000005226 ADAP00813 363 aa13.31□□□□□ -0.28
USH1C-201ENST00000005226 SOD2P04179 222 aa13.31□□□□□ -0.28
USH1C-201ENST00000005226 CTSLP07711 333 aa13.31□□□□□ -0.28
USH1C-201ENST00000005226 MANFP55145 182 aaKnown RBP13.31□□□□□ -0.28
USH1C-201ENST00000005226 SNRPD2P62316 118 aaKnown RBP13.31□□□□□ -0.28
USH1C-201ENST00000005226 POLR2LP62875 67 aaKnown RBP13.31□□□□□ -0.28
USH1C-201ENST00000005226 CAMK2BQ13554 666 aa13.31□□□□□ -0.28
USH1C-201ENST00000005226 GINS1Q14691 196 aa13.31□□□□□ -0.28
USH1C-201ENST00000005226 MFSD4BQ5TF39 518 aa13.31□□□□□ -0.28
USH1C-201ENST00000005226 C12orf73Q69YU5 71 aa13.31□□□□□ -0.28
USH1C-201ENST00000005226 ERAP2Q6P179 960 aa13.31□□□□□ -0.28
USH1C-201ENST00000005226 PODNL1Q6PEZ8 512 aa13.31□□□□□ -0.28
USH1C-201ENST00000005226 CCDC149Q6ZUS6 474 aa13.31□□□□□ -0.28
USH1C-201ENST00000005226 PDZD3Q86UT5 571 aa13.31□□□□□ -0.28
USH1C-201ENST00000005226 DTX3Q8N9I9 347 aa13.31□□□□□ -0.28
USH1C-201ENST00000005226 NLGN4YQ8NFZ3 816 aaPredicted RBP13.31□□□□□ -0.28
USH1C-201ENST00000005226 OR5D16Q8NGK9 328 aa13.31□□□□□ -0.28
USH1C-201ENST00000005226 EXOSC8Q96B26 276 aaKnown RBP13.31□□□□□ -0.28
USH1C-201ENST00000005226 AP2M1Q96CW1 435 aa13.31□□□□□ -0.28
USH1C-201ENST00000005226 PDXPQ96GD0 296 aa13.31□□□□□ -0.28
USH1C-201ENST00000005226 LRR1Q96L50 414 aa13.31□□□□□ -0.28
USH1C-201ENST00000005226 F2RL3Q96RI0 385 aa13.31□□□□□ -0.28
USH1C-201ENST00000005226 MYNNQ9NPC7 610 aa13.31□□□□□ -0.28
USH1C-201ENST00000005226 AP1M2Q9Y6Q5 423 aa13.31□□□□□ -0.28
USH1C-201ENST00000005226 UQCRC2P22695 453 aa13.31□□□□□ -0.28
USH1C-201ENST00000005226 TAP2Q03519 686 aa13.31□□□□□ -0.28
USH1C-201ENST00000005226 MAP4K2Q12851 820 aa13.31□□□□□ -0.28
USH1C-201ENST00000005226 ZNF284Q2VY69 593 aa13.31□□□□□ -0.28
USH1C-201ENST00000005226 SPDYE7PQ495Y7 208 aa13.31□□□□□ -0.28
USH1C-201ENST00000005226 CRTC2Q53ET0 693 aaPredicted RBP13.31□□□□□ -0.28
USH1C-201ENST00000005226 ZDHHC20Q5W0Z9 365 aa13.31□□□□□ -0.28
USH1C-201ENST00000005226 TRMT11Q7Z4G4 463 aaKnown RBP13.31□□□□□ -0.28
USH1C-201ENST00000005226 PROKR2Q8NFJ6 384 aa13.31□□□□□ -0.28
USH1C-201ENST00000005226 CXorf40BQ96DE9 158 aa13.31□□□□□ -0.28
USH1C-201ENST00000005226 DCLRE1CQ96SD1 692 aaKnown RBP13.31□□□□□ -0.28
USH1C-201ENST00000005226 OR2AG1Q9H205 316 aa13.31□□□□□ -0.28
USH1C-201ENST00000005226 PRAMEF27A3QJZ7 478 aa13.3□□□□□ -0.28
USH1C-201ENST00000005226 GRM6O15303 877 aa13.3□□□□□ -0.28
USH1C-201ENST00000005226 PQBP1O60828 265 aaKnown RBP13.3□□□□□ -0.28
USH1C-201ENST00000005226 STATHP02808 62 aa13.3□□□□□ -0.28
USH1C-201ENST00000005226 ITGB7P26010 798 aa13.3□□□□□ -0.28
USH1C-201ENST00000005226 SOX18P35713 384 aa13.3□□□□□ -0.28
USH1C-201ENST00000005226 RECQLP46063 649 aaPredicted RBP13.3□□□□□ -0.28
USH1C-201ENST00000005226 WDR5P61964 334 aaKnown RBP13.3□□□□□ -0.28
USH1C-201ENST00000005226 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.3□□□□□ -0.28
USH1C-201ENST00000005226 CNTN1Q12860 1018 aa13.3□□□□□ -0.28
USH1C-201ENST00000005226 P2RY14Q15391 338 aa13.3□□□□□ -0.28
USH1C-201ENST00000005226 SYCE2Q6PIF2 218 aa13.3□□□□□ -0.28
USH1C-201ENST00000005226 C6orf120Q7Z4R8 191 aa13.3□□□□□ -0.28
USH1C-201ENST00000005226 TRIM69Q86WT6 500 aa13.3□□□□□ -0.28
USH1C-201ENST00000005226 TRAPPC5Q8IUR0 188 aa13.3□□□□□ -0.28
USH1C-201ENST00000005226 TRAM1L1Q8N609 369 aa13.3□□□□□ -0.28
USH1C-201ENST00000005226 OR8J1Q8NGP2 316 aa13.3□□□□□ -0.28
USH1C-201ENST00000005226 OR52P1PQ8NH57 321 aa13.3□□□□□ -0.28
USH1C-201ENST00000005226 SLC5A11Q8WWX8 675 aa13.3□□□□□ -0.28
USH1C-201ENST00000005226 YIPF4Q9BSR8 244 aa13.3□□□□□ -0.28
USH1C-201ENST00000005226 SPG21Q9NZD8 308 aa13.3□□□□□ -0.28
USH1C-201ENST00000005226 HCN2Q9UL51 889 aa13.3□□□□□ -0.28
USH1C-201ENST00000005226 C5orf42Q9H799 3197 aa13.3□□□□□ -0.28
USH1C-201ENST00000005226 TEX28O15482 410 aa13.3□□□□□ -0.28
USH1C-201ENST00000005226 HOXA2O43364 376 aa13.3□□□□□ -0.28
USH1C-201ENST00000005226 AKR7A2O43488 359 aa13.3□□□□□ -0.28
USH1C-201ENST00000005226 NME6O75414 186 aaPredicted RBP13.3□□□□□ -0.28
USH1C-201ENST00000005226 CCNYL3P0C7X3 344 aa13.3□□□□□ -0.28
USH1C-201ENST00000005226 ENDOUP21128 410 aaKnown RBP13.3□□□□□ -0.28
USH1C-201ENST00000005226 XPAP23025 273 aaPredicted RBP13.3□□□□□ -0.28
USH1C-201ENST00000005226 RAB25P57735 213 aa13.3□□□□□ -0.28
USH1C-201ENST00000005226 MLLT11Q13015 90 aaPredicted RBP13.3□□□□□ -0.28
USH1C-201ENST00000005226 C1DQ13901 141 aaKnown RBP13.3□□□□□ -0.28
USH1C-201ENST00000005226 RAB33AQ14088 237 aa13.3□□□□□ -0.28
USH1C-201ENST00000005226 ELOAQ14241 798 aaKnown RBP13.3□□□□□ -0.28
USH1C-201ENST00000005226 SYT14P1Q58G82 188 aa13.3□□□□□ -0.28
USH1C-201ENST00000005226 SLC35F1Q5T1Q4 408 aa13.3□□□□□ -0.28
USH1C-201ENST00000005226 PPP2R2DQ66LE6 453 aa13.3□□□□□ -0.28
USH1C-201ENST00000005226 HIST2H2AA3Q6FI13 130 aa13.3□□□□□ -0.28
USH1C-201ENST00000005226 NXPE4Q6UWF7 544 aa13.3□□□□□ -0.28
USH1C-201ENST00000005226 TECPR1Q7Z6L1 1165 aa13.3□□□□□ -0.28
USH1C-201ENST00000005226 ZER1Q7Z7L7 766 aa13.3□□□□□ -0.28
USH1C-201ENST00000005226 CPXM2Q8N436 756 aa13.3□□□□□ -0.28
USH1C-201ENST00000005226 SLC43A3Q8NBI5 491 aa13.3□□□□□ -0.28
USH1C-201ENST00000005226 XAGE5Q8WWM1 108 aa13.3□□□□□ -0.28
USH1C-201ENST00000005226 REPS1Q96D71 796 aa13.3□□□□□ -0.28
USH1C-201ENST00000005226 FRMD6Q96NE9 622 aa13.3□□□□□ -0.28
USH1C-201ENST00000005226 WDFY2Q96P53 400 aa13.3□□□□□ -0.28
USH1C-201ENST00000005226 PLA2G12AQ9BZM1 189 aa13.3□□□□□ -0.28
USH1C-201ENST00000005226 EGLN3Q9H6Z9 239 aa13.3□□□□□ -0.28
USH1C-201ENST00000005226 RNF121Q9H920 327 aa13.3□□□□□ -0.28
USH1C-201ENST00000005226 RPRD1BQ9NQG5 326 aaKnown RBP13.3□□□□□ -0.28
USH1C-201ENST00000005226 ENOPH1Q9UHY7 261 aa13.3□□□□□ -0.28
USH1C-201ENST00000005226 MAPRE3Q9UPY8 281 aa13.3□□□□□ -0.28
USH1C-201ENST00000005226 MGAT4BQ9UQ53 548 aa13.3□□□□□ -0.28
USH1C-201ENST00000005226 IQCMA0A1B0GVH7 501 aa13.29□□□□□ -0.28
USH1C-201ENST00000005226 CENPBD1B2RD01 187 aa13.29□□□□□ -0.28
USH1C-201ENST00000005226 ERVH48-1M5A8F1 160 aa13.29□□□□□ -0.28
USH1C-201ENST00000005226 FOXE1O00358 373 aaPredicted RBP13.29□□□□□ -0.28
USH1C-201ENST00000005226 SLC28A2O43868 658 aa13.29□□□□□ -0.28
USH1C-201ENST00000005226 EPHX1P07099 455 aa13.29□□□□□ -0.28
USH1C-201ENST00000005226 OR12D1P0DN82 309 aa13.29□□□□□ -0.28
USH1C-201ENST00000005226 MMP11P24347 488 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms