RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Phf11aQ8BVM9 293 aa15.07■□□□□ 0
Trim39-203ENSMUST00000113706 Ly6g5cQ8K1T5 149 aa15.07■□□□□ 0
Trim39-203ENSMUST00000113706 Pla2g15Q8VEB4 412 aa15.07■□□□□ 0
Trim39-203ENSMUST00000113706 Rnf130Q8VEM1 419 aa15.07■□□□□ 0
Trim39-203ENSMUST00000113706 GMCL1P1Q99N64 498 aa15.07■□□□□ 0
Trim39-203ENSMUST00000113706 5530401A14RikQ9D3H9 131 aa15.07■□□□□ 0
Trim39-203ENSMUST00000113706 Plod2Q9R0B9 737 aa15.07■□□□□ 0
Trim39-203ENSMUST00000113706 1700028J19RikA0A0U1RP08 172 aa15.07■□□□□ 0
Trim39-203ENSMUST00000113706 Smurf2A2A5Z6 748 aa15.07■□□□□ 0
Trim39-203ENSMUST00000113706 Mfsd4b4J3QNS5 503 aa15.07■□□□□ 0
Trim39-203ENSMUST00000113706 BgnP28653 369 aa15.07■□□□□ 0
Trim39-203ENSMUST00000113706 Dnaja1P63037 397 aaKnown RBP15.07■□□□□ 0
Trim39-203ENSMUST00000113706 Vipr1P97751 459 aa15.07■□□□□ 0
Trim39-203ENSMUST00000113706 Glycam1Q02596 151 aa15.07■□□□□ 0
Trim39-203ENSMUST00000113706 B4galnt2Q09199 510 aa15.07■□□□□ 0
Trim39-203ENSMUST00000113706 Smim24Q0VG18 120 aa15.07■□□□□ 0
Trim39-203ENSMUST00000113706 C1orf109Q499E6 217 aa15.07■□□□□ 0
Trim39-203ENSMUST00000113706 Ostf1Q62422 215 aa15.07■□□□□ 0
Trim39-203ENSMUST00000113706 Cypt4Q6P925 153 aa15.07■□□□□ 0
Trim39-203ENSMUST00000113706 Gpr75Q6X632 540 aa15.07■□□□□ 0
Trim39-203ENSMUST00000113706 Rcn3Q8BH97 328 aa15.07■□□□□ 0
Trim39-203ENSMUST00000113706 Zhx3Q8C0Q2 951 aa15.07■□□□□ 0
Trim39-203ENSMUST00000113706 Olfr1047Q8VGS0 319 aa15.07■□□□□ 0
Trim39-203ENSMUST00000113706 Piezo2Q8CD54 2822 aa15.07■□□□□ 0
Trim39-203ENSMUST00000113706 BC024063A0A1W2P7G7 749 aa15.07■□□□□ 0
Trim39-203ENSMUST00000113706 Olfr59B1ARL3 323 aa15.07■□□□□ 0
Trim39-203ENSMUST00000113706 Kif28pD3YXS5 1028 aa15.07■□□□□ 0
Trim39-203ENSMUST00000113706 Rhox2hK7N6P1 191 aa15.07■□□□□ 0
Trim39-203ENSMUST00000113706 P01667 111 aa15.07■□□□□ 0
Trim39-203ENSMUST00000113706 Slc2a2P14246 523 aa15.07■□□□□ 0
Trim39-203ENSMUST00000113706 Gabra3P26049 492 aa15.07■□□□□ 0
Trim39-203ENSMUST00000113706 IgfalsP70389 603 aa15.07■□□□□ 0
Trim39-203ENSMUST00000113706 Gbx1P82976 418 aa15.07■□□□□ 0
Trim39-203ENSMUST00000113706 Gdf9Q07105 441 aa15.07■□□□□ 0
Trim39-203ENSMUST00000113706 Yy2Q3TTC2 378 aa15.07■□□□□ 0
Trim39-203ENSMUST00000113706 Gpr39Q5U431 456 aa15.07■□□□□ 0
Trim39-203ENSMUST00000113706 Gramd2bQ6PEM6 445 aa15.07■□□□□ 0
Trim39-203ENSMUST00000113706 Q8K039 155 aa15.07■□□□□ 0
Trim39-203ENSMUST00000113706 Bud23Q9CY21 281 aa15.07■□□□□ 0
Trim39-203ENSMUST00000113706 Hspa12bQ9CZJ2 685 aa15.07■□□□□ 0
Trim39-203ENSMUST00000113706 Nos1apQ9D3A8 503 aa15.07■□□□□ 0
Trim39-203ENSMUST00000113706 Adam23Q9R1V7 829 aa15.07■□□□□ 0
Trim39-203ENSMUST00000113706 Gm3752A6NAT4 150 aa15.06■□□□□ 0
Trim39-203ENSMUST00000113706 Ankle1A8VU90 534 aa15.06■□□□□ 0
Trim39-203ENSMUST00000113706 MbP04247 154 aa15.06■□□□□ 0
Trim39-203ENSMUST00000113706 GypaP14220 168 aa15.06■□□□□ 0
Trim39-203ENSMUST00000113706 PlgP20918 812 aa15.06■□□□□ 0
Trim39-203ENSMUST00000113706 InaP46660 501 aa15.06■□□□□ 0
Trim39-203ENSMUST00000113706 CntfP51642 198 aa15.06■□□□□ 0
Trim39-203ENSMUST00000113706 CishQ62225 257 aa15.06■□□□□ 0
Trim39-203ENSMUST00000113706 Trappc6aQ78XR0 159 aa15.06■□□□□ 0
Trim39-203ENSMUST00000113706 Trim36Q80WG7 729 aa15.06■□□□□ 0
Trim39-203ENSMUST00000113706 Mospd3Q8BGG6 235 aa15.06■□□□□ 0
Trim39-203ENSMUST00000113706 Gprin3Q8BWS5 763 aa15.06■□□□□ 0
Trim39-203ENSMUST00000113706 Dach2Q925Q8 634 aa15.06■□□□□ 0
Trim39-203ENSMUST00000113706 Dnase1l2Q9D1G0 278 aa15.06■□□□□ 0
Trim39-203ENSMUST00000113706 Trav1A0A075B5Z4 110 aa15.06■□□□□ 0
Trim39-203ENSMUST00000113706 Vmn1r90A0A087WR36 309 aa15.06■□□□□ 0
Trim39-203ENSMUST00000113706 DgkaO88673 730 aa15.06■□□□□ 0
Trim39-203ENSMUST00000113706 LcatP16301 438 aa15.06■□□□□ 0
Trim39-203ENSMUST00000113706 ptchd1Q14B62 888 aa15.06■□□□□ 0
Trim39-203ENSMUST00000113706 Ankdd1bQ14DN9 521 aa15.06■□□□□ 0
Trim39-203ENSMUST00000113706 Acsm3Q3UNX5 580 aa15.06■□□□□ 0
Trim39-203ENSMUST00000113706 Sf1Q64213 653 aaKnown RBP15.06■□□□□ 0
Trim39-203ENSMUST00000113706 Mon1bQ8BMQ8 553 aa15.06■□□□□ 0
Trim39-203ENSMUST00000113706 Derl2Q8BNI4 239 aaKnown RBP15.06■□□□□ 0
Trim39-203ENSMUST00000113706 Fam92aQ8BP22 355 aa15.06■□□□□ 0
Trim39-203ENSMUST00000113706 Lrp11Q8CB67 483 aa15.06■□□□□ 0
Trim39-203ENSMUST00000113706 Irf2bp1Q8R3Y8 584 aa15.06■□□□□ 0
Trim39-203ENSMUST00000113706 Scpep1Q920A5 452 aa15.06■□□□□ 0
Trim39-203ENSMUST00000113706 D10Jhu81eQ9D172 266 aa15.06■□□□□ 0
Trim39-203ENSMUST00000113706 Cmpk1Q9DBP5 196 aa15.06■□□□□ 0
Trim39-203ENSMUST00000113706 Aldh6a1Q9EQ20 535 aaKnown RBP15.06■□□□□ 0
Trim39-203ENSMUST00000113706 Gm29797A0A140LIA7 188 aa15.05■□□□□ 0
Trim39-203ENSMUST00000113706 AmbnO55189 407 aa15.05■□□□□ 0
Trim39-203ENSMUST00000113706 Apex1P28352 317 aaKnown RBP15.05■□□□□ 0
Trim39-203ENSMUST00000113706 Ypel5P62700 121 aa15.05■□□□□ 0
Trim39-203ENSMUST00000113706 GiprQ0P543 460 aa15.05■□□□□ 0
Trim39-203ENSMUST00000113706 Taar2Q5QD17 339 aa15.05■□□□□ 0
Trim39-203ENSMUST00000113706 Vdac3Q60931 283 aaKnown RBP15.05■□□□□ 0
Trim39-203ENSMUST00000113706 Defa-rs10Q64263 91 aa15.05■□□□□ 0
Trim39-203ENSMUST00000113706 Cmtr2Q8BWQ4 767 aa15.05■□□□□ 0
Trim39-203ENSMUST00000113706 Gpr153Q8K0Z9 631 aa15.05■□□□□ 0
Trim39-203ENSMUST00000113706 PrkraQ9WTX2 313 aaKnown RBP15.05■□□□□ 0
Trim39-203ENSMUST00000113706 AU018091E9PWS4 684 aa15.05■□□□□ -0
Trim39-203ENSMUST00000113706 Gm3239L7N2D9 227 aa15.05■□□□□ -0
Trim39-203ENSMUST00000113706 EmdO08579 259 aaKnown RBP15.05■□□□□ -0
Trim39-203ENSMUST00000113706 MazP56671 477 aaKnown RBP15.05■□□□□ -0
Trim39-203ENSMUST00000113706 Fgf1P61148 155 aa15.05■□□□□ -0
Trim39-203ENSMUST00000113706 Ag2Q3UPL5 249 aa15.05■□□□□ -0
Trim39-203ENSMUST00000113706 Vwa5b2Q3UR50 1248 aa15.05■□□□□ -0
Trim39-203ENSMUST00000113706 Q5EBG8 199 aa15.05■□□□□ -0
Trim39-203ENSMUST00000113706 Eri3Q8C460 337 aa15.05■□□□□ -0
Trim39-203ENSMUST00000113706 Vmn1r30Q8R2D2 302 aa15.05■□□□□ -0
Trim39-203ENSMUST00000113706 Gpn2Q8VEJ1 310 aa15.05■□□□□ -0
Trim39-203ENSMUST00000113706 Zdhhc21Q9D270 265 aa15.05■□□□□ -0
Trim39-203ENSMUST00000113706 Olfr1145A2AVC7 325 aa15.05■□□□□ -0
Trim39-203ENSMUST00000113706 Vmn1r177E9PXM3 309 aa15.05■□□□□ -0
Trim39-203ENSMUST00000113706 Olfr629Q0VBH3 314 aa15.05■□□□□ -0
Trim39-203ENSMUST00000113706 Osgepl1Q6PEB4 414 aa15.05■□□□□ -0
Retrieved 100 of 22,080 RNA–protein pairs in 24.6 ms