RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 McatQ8R3F5 381 aaKnown RBP11.34□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Retreg3Q9CQV4 466 aa11.34□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Med31Q9CXU1 131 aaKnown RBP11.34□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Ndufv2Q9D6J6 248 aa11.34□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Sh3bgrlQ9JJU8 114 aaKnown RBP11.34□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Zfp978A2A7I1 335 aa11.34□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Psmb5O55234 264 aa11.34□□□□□ -0.59
Pcif1-201ENSMUST00000041643 OtcP11725 354 aa11.34□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Gm732Q3V0P9 516 aa11.34□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Bend6Q6PFX2 281 aa11.34□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Itpk1Q8BYN3 419 aa11.34□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Vmn1r87Q8R255 295 aa11.34□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Brinp1Q920P3 760 aa11.34□□□□□ -0.59
Pcif1-201ENSMUST00000041643 HnrnpabQ99020 285 aaKnown RBP11.34□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Gpr146Q99LE2 333 aa11.34□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Mrps18aQ99N85 196 aa11.34□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Wdr73Q9CWR1 371 aa11.34□□□□□ -0.59
Pcif1-201ENSMUST00000041643 GmfgQ9ERL7 142 aa11.34□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Smok1Q9QYZ4 484 aa11.34□□□□□ -0.59
Pcif1-201ENSMUST00000041643 VapaQ9WV55 249 aaKnown RBP11.34□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Gm3952A0A0A6YXJ1 191 aa11.34□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Olfr237-ps1K9J725 310 aa11.34□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Timp2P25785 220 aa11.34□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Art5P70352 309 aa11.34□□□□□ -0.59
Pcif1-201ENSMUST00000041643 PomkQ3TUA9 349 aa11.34□□□□□ -0.59
Pcif1-201ENSMUST00000041643 DglucyQ8BH86 617 aa11.34□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Kiaa1671Q8BRV5 308 aa11.34□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Zbtb26Q8C8S0 451 aa11.34□□□□□ -0.59
Pcif1-201ENSMUST00000041643 EndovQ8C9A2 338 aa11.34□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Olfr1487Q8VFQ6 315 aa11.34□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Wwp2Q9DBH0 870 aa11.34□□□□□ -0.59
Pcif1-201ENSMUST00000041643 AcoxlQ9DBS4 632 aa11.34□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Tmem235B1AQL3 211 aa11.34□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Ccrl2O35457 360 aa11.34□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Tlx3O55144 291 aa11.34□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Psmd3P14685 530 aa11.34□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Bmp7P23359 430 aa11.34□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Q3U4G0 281 aa11.34□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Pramef8Q8CE24 480 aa11.34□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Cstf1Q99LC2 431 aaKnown RBP11.34□□□□□ -0.59
Pcif1-201ENSMUST00000041643 LipfQ9CPP7 395 aa11.34□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Bud23Q9CY21 281 aa11.34□□□□□ -0.59
Pcif1-201ENSMUST00000041643 S100a14Q9D2Q8 104 aa11.34□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Cers5Q9D6K9 414 aa11.34□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Q9D8N1 392 aa11.34□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Twsg1Q9EP52 222 aa11.34□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Krt81Q9ERE2 481 aa11.34□□□□□ -0.59
Pcif1-201ENSMUST00000041643 ClcnkbQ9WUB6 687 aa11.34□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Igkv16-104A0A0B4J1I1 116 aa11.33□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Xlr4aA2BI40 215 aa11.33□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Vsig10lD3YZF7 868 aa11.33□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Catsperg1E9Q355 1151 aa11.33□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Nlrp12E9Q5R7 1054 aa11.33□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Asna1O54984 348 aa11.33□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Vwa5b2Q3UR50 1248 aa11.33□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Atp6v1g3Q8BMC1 118 aa11.33□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Tspan11Q9D1D1 253 aa11.33□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Vmn1r184E9Q2N4 314 aa11.33□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Kcnk4O88454 398 aa11.33□□□□□ -0.6
Pcif1-201ENSMUST00000041643 AhcyP50247 432 aa11.33□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Zfp41Q02526 198 aa11.33□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Rbbp4Q60972 425 aa11.33□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Znf770Q8BIQ8 705 aa11.33□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Batf2Q8R1H8 277 aa11.33□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Oosp1Q925U0 202 aa11.33□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Ift43Q9DA69 206 aa11.33□□□□□ -0.6
Pcif1-201ENSMUST00000041643 GnmtQ9QXF8 293 aa11.33□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Polr2aP08775 1970 aaKnown RBP11.33□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Vmn2r110E9PWD5 858 aa11.33□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Zscan26Q5RJ54 466 aa11.33□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Clcn4Q61418 747 aa11.33□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Oog2Q7TPX8 476 aa11.33□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Psmf1Q8BHL8 271 aa11.33□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Fgd2Q8BY35 655 aa11.33□□□□□ -0.6
Pcif1-201ENSMUST00000041643 GlyatQ91XE0 296 aa11.33□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Commd4Q9CQ02 199 aa11.33□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Aaed1Q9D1A0 226 aa11.33□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Batf3Q9D275 118 aa11.33□□□□□ -0.6
Pcif1-201ENSMUST00000041643 NtsQ9D3P9 169 aa11.33□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Fank1Q9DAM9 344 aa11.33□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Olfr930Q9EQ99 308 aa11.33□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Dgcr6O35347 198 aa11.33□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Cyp2j5O54749 501 aa11.33□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Mtnd1P03888 318 aa11.33□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Gpat2Q14DK4 801 aa11.33□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Spata13Q5DU57 656 aa11.33□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Abcb7Q61102 752 aaKnown RBP11.33□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Ddx51Q6P9R1 639 aaKnown RBP11.33□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Kcnk12Q76M80 430 aa11.33□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Fam180aQ8BR21 173 aa11.33□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Apoa5Q8C7G5 368 aa11.33□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Crb3Q8QZT4 113 aa11.33□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Hdac8Q8VH37 377 aa11.33□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Taar1Q923Y8 332 aa11.33□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Clic3Q9D7P7 237 aa11.33□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Tpk1Q9R0M5 243 aa11.33□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Gm37596A0A0A6YXL2 336 aa11.33□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Tcrg-V3A0A0G2JEW2 117 aa11.33□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Tceal7A3KGA4 98 aa11.33□□□□□ -0.6
Pcif1-201ENSMUST00000041643 Gm8159E9Q0R1 267 aa11.33□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 41.5 ms