RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Barhl1P63157 327 aa17.51■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Csnk2bP67871 215 aaKnown RBP17.51■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Sec24aQ3U2P1 1090 aa17.51■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Rapgefl1Q68EF8 662 aa17.51■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Enpp6Q8BGN3 440 aa17.51■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Palm2Q8BR92 376 aa17.51■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Cxcl16Q8BSU2 246 aa17.51■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Tctn1Q8BZ64 593 aa17.51■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Npsr1Q8BZP8 371 aa17.51■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Polr1eQ8K202 482 aaKnown RBP17.51■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Ntng1Q8R4G0 539 aa17.51■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Olfr535Q8VGL3 312 aa17.51■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Spred1Q924S8 444 aa17.51■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Cadm3Q99N28 396 aa17.51■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Atp5dQ9D3D9 168 aa17.51■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 NaaaQ9D7V9 362 aa17.51■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Ebna1bp2Q9D903 306 aaKnown RBP17.51■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Gdf2Q9WV56 428 aa17.51■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Gm15013V9GWY0 266 aa17.51■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Gm17190V9GX38 357 aa17.51■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Gm35911A0A1D5RLS7 214 aa17.5■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Tbc1d25A1A5B6 742 aa17.5■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Psmb5O55234 264 aa17.5■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Htr3aP23979 487 aa17.5■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Defb23Q30KP0 166 aa17.5■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Ctu2Q3U308 514 aa17.5■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Q3UK37 420 aa17.5■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Atl1Q8BH66 558 aa17.5■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Lcmt2Q8BYR1 686 aa17.5■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Tmem221Q8K071 230 aa17.5■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Kiaa2013Q91X21 634 aa17.5■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 AmnQ99JB7 458 aaKnown RBP17.5■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Mrps33Q9D2R8 106 aa17.5■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Ift46Q9DB07 301 aa17.5■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Mettl15Q9DCL4 406 aa17.5■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Il21Q9ES17 146 aa17.5■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Gpc6Q9R087 555 aa17.5■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Cd300ld4A2A7W1 245 aa17.5■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Tcte1A6H639 498 aa17.5■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Esp18A8R0V1 91 aa17.5■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Kcnmb3E9Q7U0 239 aa17.5■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Gm597E9Q8J5 896 aa17.5■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Vmn2r9K7N6Z8 848 aa17.5■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Id2P41136 134 aa17.5■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Fmo1P50285 532 aa17.5■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Tmem38aQ3TMP8 298 aa17.5■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Dalrd3Q6PJN8 538 aa17.5■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Cd300ld3Q6SJQ5 245 aa17.5■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Q810M1 233 aa17.5■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Sall4Q8BX22 1067 aa17.5■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Fam161aQ8QZV6 448 aa17.5■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 NotumQ8R116 503 aa17.5■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Lsm7Q9CQQ8 103 aaKnown RBP17.5■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Dppa5aQ9CQS7 118 aa17.5■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Fam122aQ9DB52 284 aa17.5■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Plekhb1Q9QYE9 243 aa17.5■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Gm8926L7MUE8 181 aa17.49■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Dnajb3O35723 242 aa17.49■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Tnfaip1O70479 316 aa17.49■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Fezf1Q0VDQ9 475 aa17.49■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Rars2Q3U186 578 aa17.49■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 LpoQ5SW46 710 aa17.49■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 MuskQ61006 868 aa17.49■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Prkg2Q61410 762 aa17.49■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Fbxl19Q6PB97 674 aa17.49■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Ugt2a2Q6PDD0 528 aa17.49■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Cramp1Q6PG95 1285 aa17.49■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 GnptgQ6S5C2 307 aa17.49■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 E330021D16RikQ8BW45 371 aa17.49■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Micu2Q8CD10 432 aa17.49■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Clec4a3Q8JZX6 237 aa17.49■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Sf3b4Q8QZY9 424 aaKnown RBP17.49■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Khdc3Q9CWU5 440 aa17.49■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Acss2Q9QXG4 701 aa17.49■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Dyrk1bQ9Z188 629 aa17.49■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 H2-BlV9GXR0 257 aa17.49■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Mki67E9PVX6 3177 aaKnown RBP17.49■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Lilra6A0A0B4J1F3 663 aa17.49■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Gm6710A2ART0 554 aa17.49■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Gm436B1AVU6 407 aa17.49■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Mapk12O08911 367 aa17.49■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Crybb2P62696 205 aa17.49■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Il12rb2P97378 874 aa17.49■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Tgm3Q08189 693 aa17.49■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Myl12aQ6ZWQ9 172 aa17.49■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Q8R3C1 574 aa17.49■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Ffar2Q8VCK6 330 aa17.49■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Olfr45Q8VGM1 311 aa17.49■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Acot7Q91V12 381 aa17.49■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Desi1Q9CQT7 168 aa17.49■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Yipf5Q9EQQ2 257 aa17.49■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Ntn4Q9JI33 628 aa17.49■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 PnckQ9QYK9 343 aa17.49■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Trpm6Q8CIR4 2028 aa17.49■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Lcn5A2AJB7 192 aa17.48■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Gm8180E9PXN0 145 aa17.48■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 PrnpP04925 254 aa17.48■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 FesP16879 822 aa17.48■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Ephb3P54754 993 aaKnown RBP17.48■□□□□ 0.39
Ccdc3-201ENSMUST00000027988 Wdr5P61965 334 aa17.48■□□□□ 0.39
Retrieved 100 of 22,080 RNA–protein pairs in 46.5 ms