RNA–Protein interactions for RNA: ENSMUST00000001147.4

Col6a1-201, Transcript of Collagen alpha-1(VI) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col6a1, Length 4,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1-201ENSMUST00000001147 Ppp1r3eQ8BRJ4 279 aa9.06□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Slc43a1Q8BSM7 564 aa9.06□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Trmt10aQ8C1Z8 328 aaKnown RBP9.06□□□□□ -0.96
Col6a1-201ENSMUST00000001147 TapbplQ8VD31 451 aa9.06□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Olfr700Q8VFM5 316 aa9.06□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Ankrd54Q91WK7 299 aa9.06□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Mlf2Q99KX1 247 aa9.06□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Gimap3Q99MI6 301 aa9.06□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Sohlh2Q9D489 467 aa9.06□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Necab3Q9D6J4 353 aa9.06□□□□□ -0.96
Col6a1-201ENSMUST00000001147 EqtnQ9D9V2 337 aa9.06□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Tgm1Q9JLF6 815 aa9.06□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Znf207Q9JMD0 495 aaKnown RBP9.06□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Ulk2Q9QY01 1037 aa9.06□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Ptges3Q9R0Q7 160 aaKnown RBP9.06□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Tcf7l1Q9Z1J1 584 aa9.06□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Gm8229K7N749 213 aa9.06□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Vmn1r16K7N775 303 aa9.06□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Vmn2r102L7N279 857 aa9.06□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Phox2bO35690 314 aa9.06□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Cdk5r2O35926 369 aa9.06□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Mtnd3P03899 115 aa9.06□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Man2a1P27046 1150 aa9.06□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Csrp3P50462 194 aa9.06□□□□□ -0.96
Col6a1-201ENSMUST00000001147 GlaP51569 419 aa9.06□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Gm14226Q3TZL0 686 aa9.06□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Bdkrb1Q61125 334 aa9.06□□□□□ -0.96
Col6a1-201ENSMUST00000001147 AktipQ64362 292 aa9.06□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Larp4Q8BWW4 719 aaKnown RBP9.06□□□□□ -0.96
Col6a1-201ENSMUST00000001147 RybpQ8CCI5 228 aa9.06□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Nlrp10Q8CCN1 673 aa9.06□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Padi6Q8K3V4 682 aa9.06□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Tspan1Q99J59 240 aa9.06□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Desi1Q9CQT7 168 aa9.06□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Nkiras2Q9CR56 191 aa9.06□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Spata19Q9DAQ9 154 aa9.06□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Yipf5Q9EQQ2 257 aa9.06□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Sppl2aQ9JJF9 523 aa9.06□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Gm21865A0A087WRL2 222 aa9.05□□□□□ -0.96
Col6a1-201ENSMUST00000001147 4930595M18RikA2RRY9 829 aa9.05□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Ccdc149F6V035 524 aa9.05□□□□□ -0.96
Col6a1-201ENSMUST00000001147 5830473C10RikF8VQ07 620 aa9.05□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Gfra2O08842 464 aa9.05□□□□□ -0.96
Col6a1-201ENSMUST00000001147 CyctP00015 105 aa9.05□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Opn1swP51491 346 aa9.05□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Mrps6P58064 125 aa9.05□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Cry1P97784 606 aa9.05□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Zfp41Q02526 198 aa9.05□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Dcst1Q059Y8 732 aa9.05□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Cd244Q07763 397 aa9.05□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Mat2aQ3THS6 395 aaKnown RBP9.05□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Q6P1I3 445 aa9.05□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Gm9758Q80ZT2 255 aa9.05□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Adam29Q811Q4 763 aa9.05□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Pomt2Q8BGQ4 820 aa9.05□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Gpr26Q8BZA7 337 aa9.05□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Nuak2Q8BZN4 639 aa9.05□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Q8C3W1 322 aa9.05□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Gatad2aQ8CHY6 629 aaKnown RBP9.05□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Cdc73Q8JZM7 531 aa9.05□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Zfp709Q8VC29 727 aa9.05□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Q91W34 466 aa9.05□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Mat1aQ91X83 396 aaKnown RBP9.05□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Elmod3Q91YP6 381 aa9.05□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Trmt5Q9D0C4 501 aa9.05□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Fbxl12Q9EPX5 326 aa9.05□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Adam21Q9JI76 729 aa9.05□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Pard6gQ9JK84 382 aa9.05□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Apc2Q9Z1K7 2274 aa9.05□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Znf382B2RXC5 579 aa9.05□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Gm3149E9PW52 257 aa9.05□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Gm8362K7N6Y6 257 aa9.05□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Dgcr6O35347 198 aa9.05□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Bard1O70445 765 aa9.05□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Ccr3P51678 359 aa9.05□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Prss36Q5K2P8 849 aa9.05□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Gdi2Q61598 445 aaKnown RBP9.05□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Ifngr2Q63953 332 aa9.05□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Cyp1b1Q64429 543 aa9.05□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Mfsd13aQ6PDE8 519 aa9.05□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Q80Y39 304 aa9.05□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Cnksr3Q8BMA3 555 aa9.05□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Kcnk10Q8BUW1 535 aa9.05□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Q8K207 121 aa9.05□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Slc22a22Q8R0S9 554 aa9.05□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Vopp1Q8R1C3 172 aa9.05□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Olfr599Q8VG01 315 aa9.05□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Olfr1263Q8VG63 306 aa9.05□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Elp2Q91WG4 831 aaKnown RBP9.05□□□□□ -0.96
Col6a1-201ENSMUST00000001147 AjubaQ91XC0 547 aa9.05□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Qrsl1Q9CZN8 525 aa9.05□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Dcdc2cQ9D1B8 347 aa9.05□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Ttc9bQ9D6E4 239 aa9.05□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Mcemp1Q9D8U6 183 aa9.05□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Mbd3l1Q9D9H3 186 aa9.05□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Ap3s1Q9DCR2 193 aa9.05□□□□□ -0.96
Col6a1-201ENSMUST00000001147 FancgQ9EQR6 623 aa9.05□□□□□ -0.96
Col6a1-201ENSMUST00000001147 GhrlQ9EQX0 117 aa9.05□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Pdzk1Q9JIL4 519 aa9.05□□□□□ -0.96
Col6a1-201ENSMUST00000001147 Myg1Q9JK81 380 aa9.05□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 39.2 ms