RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 SAXO2Q658L1 398 aa15.96■□□□□ 0.15
PHGDH-223ENST00000641597 PDZD3Q86UT5 571 aa15.96■□□□□ 0.15
PHGDH-223ENST00000641597 AMZ2Q86W34 360 aa15.96■□□□□ 0.15
PHGDH-223ENST00000641597 ETFBKMTQ8IXQ9 262 aa15.96■□□□□ 0.15
PHGDH-223ENST00000641597 REM2Q8IYK8 340 aaPredicted RBP15.96■□□□□ 0.15
PHGDH-223ENST00000641597 RAD51AP1Q96B01 352 aa15.96■□□□□ 0.15
PHGDH-223ENST00000641597 RAD9AQ99638 391 aa15.96■□□□□ 0.15
PHGDH-223ENST00000641597 MS4A8Q9BY19 250 aa15.96■□□□□ 0.15
PHGDH-223ENST00000641597 KLHL20Q9Y2M5 609 aa15.96■□□□□ 0.15
PHGDH-223ENST00000641597 PLEKHM1Q9Y4G2 1056 aa15.96■□□□□ 0.15
PHGDH-223ENST00000641597 COL4A3Q01955 1670 aa15.96■□□□□ 0.15
PHGDH-223ENST00000641597 TMEM221A6NGB7 291 aa15.95■□□□□ 0.14
PHGDH-223ENST00000641597 C4orf51C9J302 202 aa15.95■□□□□ 0.14
PHGDH-223ENST00000641597 PSMD11O00231 422 aa15.95■□□□□ 0.14
PHGDH-223ENST00000641597 PDPK1O15530 556 aa15.95■□□□□ 0.14
PHGDH-223ENST00000641597 PTNP21246 168 aa15.95■□□□□ 0.14
PHGDH-223ENST00000641597 DDX6P26196 483 aaKnown RBP eCLIP15.95■□□□□ 0.14
PHGDH-223ENST00000641597 CLCNKAP51800 687 aa15.95■□□□□ 0.14
PHGDH-223ENST00000641597 PRMT2P55345 433 aa15.95■□□□□ 0.14
PHGDH-223ENST00000641597 GPR19Q15760 415 aa15.95■□□□□ 0.14
PHGDH-223ENST00000641597 TP53I13Q8NBR0 393 aaPredicted RBP15.95■□□□□ 0.14
PHGDH-223ENST00000641597 JPH3Q8WXH2 748 aaPredicted RBP15.95■□□□□ 0.14
PHGDH-223ENST00000641597 OR8D1Q8WZ84 308 aa15.95■□□□□ 0.14
PHGDH-223ENST00000641597 NEURL3Q96EH8 262 aa15.95■□□□□ 0.14
PHGDH-223ENST00000641597 TEFMQ96QE5 360 aaKnown RBP15.95■□□□□ 0.14
PHGDH-223ENST00000641597 GPA33Q99795 319 aa15.95■□□□□ 0.14
PHGDH-223ENST00000641597 TREX2Q9BQ50 279 aaPredicted RBP15.95■□□□□ 0.14
PHGDH-223ENST00000641597 CNPPD1Q9BV87 410 aa15.95■□□□□ 0.14
PHGDH-223ENST00000641597 KLHL31Q9H511 634 aa15.95■□□□□ 0.14
PHGDH-223ENST00000641597 SYNPO2LQ9H987 977 aa15.95■□□□□ 0.14
PHGDH-223ENST00000641597 MBNL1Q9NR56 388 aaKnown RBP15.95■□□□□ 0.14
PHGDH-223ENST00000641597 PAIP2BQ9ULR5 123 aaKnown RBP15.95■□□□□ 0.14
PHGDH-223ENST00000641597 MAPRE3Q9UPY8 281 aa15.95■□□□□ 0.14
PHGDH-223ENST00000641597 SCN2AQ99250 2005 aa15.95■□□□□ 0.14
PHGDH-223ENST00000641597 A0A1W2PPV9 198 aa15.95■□□□□ 0.14
PHGDH-223ENST00000641597 TLR4O00206 839 aa15.95■□□□□ 0.14
PHGDH-223ENST00000641597 UGT2B10P36537 528 aa15.95■□□□□ 0.14
PHGDH-223ENST00000641597 IL12RB1P42701 662 aa15.95■□□□□ 0.14
PHGDH-223ENST00000641597 UGT2B15P54855 530 aa15.95■□□□□ 0.14
PHGDH-223ENST00000641597 HTRA4P83105 476 aaPredicted RBP15.95■□□□□ 0.14
PHGDH-223ENST00000641597 SELENBP1Q13228 472 aa15.95■□□□□ 0.14
PHGDH-223ENST00000641597 ARHGEF6Q15052 776 aa15.95■□□□□ 0.14
PHGDH-223ENST00000641597 SLC34A3Q8N130 599 aa15.95■□□□□ 0.14
PHGDH-223ENST00000641597 TCEANCQ8N8B7 351 aa15.95■□□□□ 0.14
PHGDH-223ENST00000641597 FAM210AQ96ND0 272 aa15.95■□□□□ 0.14
PHGDH-223ENST00000641597 OPALINQ96PE5 141 aa15.95■□□□□ 0.14
PHGDH-223ENST00000641597 MENTQ9BUN1 341 aa15.95■□□□□ 0.14
PHGDH-223ENST00000641597 TPK1Q9H3S4 243 aa15.95■□□□□ 0.14
PHGDH-223ENST00000641597 OSGEPL1Q9H4B0 414 aa15.95■□□□□ 0.14
PHGDH-223ENST00000641597 SEMA3GQ9NS98 782 aa15.95■□□□□ 0.14
PHGDH-223ENST00000641597 WDR70Q9NW82 654 aa15.95■□□□□ 0.14
PHGDH-223ENST00000641597 SPATA7Q9P0W8 599 aa15.95■□□□□ 0.14
PHGDH-223ENST00000641597 KCND3Q9UK17 655 aa15.95■□□□□ 0.14
PHGDH-223ENST00000641597 HCN2Q9UL51 889 aa15.95■□□□□ 0.14
PHGDH-223ENST00000641597 IRAK3Q9Y616 596 aa15.95■□□□□ 0.14
PHGDH-223ENST00000641597 KNL1Q8NG31 2342 aa15.95■□□□□ 0.14
PHGDH-223ENST00000641597 SLC28A2O43868 658 aa15.94■□□□□ 0.14
PHGDH-223ENST00000641597 CNOT3O75175 753 aaKnown RBP15.94■□□□□ 0.14
PHGDH-223ENST00000641597 C8orf89P0DMQ9 161 aa15.94■□□□□ 0.14
PHGDH-223ENST00000641597 DUSP2Q05923 314 aa15.94■□□□□ 0.14
PHGDH-223ENST00000641597 TARDBPQ13148 414 aaKnown RBP eCLIP15.94■□□□□ 0.14
PHGDH-223ENST00000641597 PLAG1Q6DJT9 500 aa15.94■□□□□ 0.14
PHGDH-223ENST00000641597 DGLUCYQ7Z3D6 616 aa15.94■□□□□ 0.14
PHGDH-223ENST00000641597 GPR65Q8IYL9 337 aa15.94■□□□□ 0.14
PHGDH-223ENST00000641597 AMER2Q8N7J2 671 aa15.94■□□□□ 0.14
PHGDH-223ENST00000641597 DPEP2Q9H4A9 486 aa15.94■□□□□ 0.14
PHGDH-223ENST00000641597 HHATLQ9HCP6 504 aa15.94■□□□□ 0.14
PHGDH-223ENST00000641597 TRPC4Q9UBN4 977 aa15.94■□□□□ 0.14
PHGDH-223ENST00000641597 SERGEFQ9UGK8 458 aa15.94■□□□□ 0.14
PHGDH-223ENST00000641597 POU2F3Q9UKI9 436 aa15.94■□□□□ 0.14
PHGDH-223ENST00000641597 NUP210Q8TEM1 1887 aaPredicted RBP15.94■□□□□ 0.14
PHGDH-223ENST00000641597 KIF26AQ9ULI4 1882 aaPredicted RBP15.94■□□□□ 0.14
PHGDH-223ENST00000641597 IGKV1-8A0A0C4DH67 115 aa15.94■□□□□ 0.14
PHGDH-223ENST00000641597 FRS3O43559 492 aa15.94■□□□□ 0.14
PHGDH-223ENST00000641597 IFNA14P01570 189 aa15.94■□□□□ 0.14
PHGDH-223ENST00000641597 CCT3P49368 545 aaKnown RBP15.94■□□□□ 0.14
PHGDH-223ENST00000641597 TUBA1BP68363 451 aa15.94■□□□□ 0.14
PHGDH-223ENST00000641597 ELAVL3Q14576 367 aaKnown RBP15.94■□□□□ 0.14
PHGDH-223ENST00000641597 ZMAT1Q5H9K5 638 aa15.94■□□□□ 0.14
PHGDH-223ENST00000641597 DESI1Q6ICB0 168 aa15.94■□□□□ 0.14
PHGDH-223ENST00000641597 TUBA1AQ71U36 451 aa15.94■□□□□ 0.14
PHGDH-223ENST00000641597 KRT78Q8N1N4 520 aa15.94■□□□□ 0.14
PHGDH-223ENST00000641597 PSD2Q9BQI7 771 aa15.94■□□□□ 0.14
PHGDH-223ENST00000641597 CRISPLD2Q9H0B8 497 aa15.94■□□□□ 0.14
PHGDH-223ENST00000641597 DSPPQ9NZW4 1301 aa15.94■□□□□ 0.14
PHGDH-223ENST00000641597 EPPINO95925 133 aa15.93■□□□□ 0.14
PHGDH-223ENST00000641597 EPHX1P07099 455 aa15.93■□□□□ 0.14
PHGDH-223ENST00000641597 FAM78AQ5JUQ0 283 aa15.93■□□□□ 0.14
PHGDH-223ENST00000641597 PGBD2Q6P3X8 592 aa15.93■□□□□ 0.14
PHGDH-223ENST00000641597 LCTLQ6UWM7 567 aa15.93■□□□□ 0.14
PHGDH-223ENST00000641597 ZNF793Q6ZN11 406 aa15.93■□□□□ 0.14
PHGDH-223ENST00000641597 LINC00299Q6ZSB3 139 aa15.93■□□□□ 0.14
PHGDH-223ENST00000641597 ERN2Q76MJ5 926 aaKnown RBP15.93■□□□□ 0.14
PHGDH-223ENST00000641597 DCUN1D3Q8IWE4 304 aa15.93■□□□□ 0.14
PHGDH-223ENST00000641597 CELF2-AS1Q8N7Q2 184 aa15.93■□□□□ 0.14
PHGDH-223ENST00000641597 TMEM203Q969S6 136 aa15.93■□□□□ 0.14
PHGDH-223ENST00000641597 LINC00615Q96LM1 132 aaPredicted RBP15.93■□□□□ 0.14
PHGDH-223ENST00000641597 SDHCQ99643 169 aaPredicted RBP15.93■□□□□ 0.14
PHGDH-223ENST00000641597 BARHL1Q9BZE3 327 aa15.93■□□□□ 0.14
PHGDH-223ENST00000641597 CLN6Q9NWW5 311 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms