RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 HCN4Q9Y3Q4 1203 aa20.37■□□□□ 0.85
CLN6-224ENST00000638076 KDM1AO60341 852 aa20.37■□□□□ 0.85
CLN6-224ENST00000638076 CCNB2O95067 398 aa20.37■□□□□ 0.85
CLN6-224ENST00000638076 BCL10O95999 233 aa20.37■□□□□ 0.85
CLN6-224ENST00000638076 OR12D1P0DN82 309 aa20.37■□□□□ 0.85
CLN6-224ENST00000638076 AHSA2Q719I0 299 aa20.37■□□□□ 0.85
CLN6-224ENST00000638076 ANKRD13BQ86YJ7 626 aa20.37■□□□□ 0.85
CLN6-224ENST00000638076 TBC1D19Q8N5T2 526 aa20.37■□□□□ 0.85
CLN6-224ENST00000638076 DNASE1L2Q92874 299 aa20.37■□□□□ 0.85
CLN6-224ENST00000638076 BBS4Q96RK4 519 aa20.37■□□□□ 0.85
CLN6-224ENST00000638076 OR51I1Q9H343 314 aa20.37■□□□□ 0.85
CLN6-224ENST00000638076 ATG4BQ9Y4P1 393 aa20.37■□□□□ 0.85
CLN6-224ENST00000638076 ASB4Q9Y574 426 aa20.37■□□□□ 0.85
CLN6-224ENST00000638076 PCDHGA4Q9Y5G9 962 aa20.37■□□□□ 0.85
CLN6-224ENST00000638076 ANHXE9PGG2 379 aa20.36■□□□□ 0.85
CLN6-224ENST00000638076 ERAL1O75616 437 aaKnown RBP20.36■□□□□ 0.85
CLN6-224ENST00000638076 PDE9AO76083 593 aa20.36■□□□□ 0.85
CLN6-224ENST00000638076 ACADMP11310 421 aa20.36■□□□□ 0.85
CLN6-224ENST00000638076 NTSP30990 170 aa20.36■□□□□ 0.85
CLN6-224ENST00000638076 KIAA1024LP59773 190 aa20.36■□□□□ 0.85
CLN6-224ENST00000638076 AQP6Q13520 282 aa20.36■□□□□ 0.85
CLN6-224ENST00000638076 PRSS48Q7RTY5 328 aa20.36■□□□□ 0.85
CLN6-224ENST00000638076 AMIGO1Q86WK6 493 aa20.36■□□□□ 0.85
CLN6-224ENST00000638076 OR2L5Q8NG80 312 aa20.36■□□□□ 0.85
CLN6-224ENST00000638076 OR5D16Q8NGK9 328 aa20.36■□□□□ 0.85
CLN6-224ENST00000638076 IPCEF1Q8WWN9 437 aaPredicted RBP20.36■□□□□ 0.85
CLN6-224ENST00000638076 LCN9Q8WX39 176 aa20.36■□□□□ 0.85
CLN6-224ENST00000638076 PROX1Q92786 737 aa20.36■□□□□ 0.85
CLN6-224ENST00000638076 GTPBP3Q969Y2 492 aaKnown RBP20.36■□□□□ 0.85
CLN6-224ENST00000638076 SLC35G5Q96KT7 338 aa20.36■□□□□ 0.85
CLN6-224ENST00000638076 ALPK1Q96QP1 1244 aa20.36■□□□□ 0.85
CLN6-224ENST00000638076 SARGQ9BW04 601 aa20.36■□□□□ 0.85
CLN6-224ENST00000638076 ZCCHC3Q9NUD5 404 aaKnown RBP20.36■□□□□ 0.85
CLN6-224ENST00000638076 CEP290O15078 2479 aa20.36■□□□□ 0.85
CLN6-224ENST00000638076 A0A1W2PR48 441 aa20.36■□□□□ 0.85
CLN6-224ENST00000638076 FFAR1O14842 300 aa20.36■□□□□ 0.85
CLN6-224ENST00000638076 PGRMC2O15173 223 aa20.36■□□□□ 0.85
CLN6-224ENST00000638076 SLC28A2O43868 658 aa20.36■□□□□ 0.85
CLN6-224ENST00000638076 BCAS1O75363 584 aaPredicted RBP20.36■□□□□ 0.85
CLN6-224ENST00000638076 ZBTB11O95625 1053 aaPredicted RBP20.36■□□□□ 0.85
CLN6-224ENST00000638076 ATP5A1P25705 553 aaKnown RBP20.36■□□□□ 0.85
CLN6-224ENST00000638076 PTGER1P34995 402 aa20.36■□□□□ 0.85
CLN6-224ENST00000638076 IDH2P48735 452 aaKnown RBP20.36■□□□□ 0.85
CLN6-224ENST00000638076 SYPL1Q16563 259 aa20.36■□□□□ 0.85
CLN6-224ENST00000638076 TPRG1LQ5T0D9 272 aa20.36■□□□□ 0.85
CLN6-224ENST00000638076 USP30Q70CQ3 517 aa20.36■□□□□ 0.85
CLN6-224ENST00000638076 SVOPQ8N4V2 548 aa20.36■□□□□ 0.85
CLN6-224ENST00000638076 XAGE5Q8WWM1 108 aa20.36■□□□□ 0.85
CLN6-224ENST00000638076 ASB12Q8WXK4 309 aa20.36■□□□□ 0.85
CLN6-224ENST00000638076 MRGPRX1Q96LB2 322 aa20.36■□□□□ 0.85
CLN6-224ENST00000638076 CLDND1Q9NY35 253 aa20.36■□□□□ 0.85
CLN6-224ENST00000638076 KCND3Q9UK17 655 aa20.36■□□□□ 0.85
CLN6-224ENST00000638076 FBXW2Q9UKT8 454 aa20.36■□□□□ 0.85
CLN6-224ENST00000638076 MYO10Q9HD67 2058 aa20.36■□□□□ 0.85
CLN6-224ENST00000638076 TMEM247A6NEH6 219 aa20.35■□□□□ 0.85
CLN6-224ENST00000638076 CHRM5P08912 532 aaPredicted RBP20.35■□□□□ 0.85
CLN6-224ENST00000638076 HOXC4P09017 264 aaPredicted RBP20.35■□□□□ 0.85
CLN6-224ENST00000638076 SLC19A1P41440 591 aa20.35■□□□□ 0.85
CLN6-224ENST00000638076 NFATC4Q14934 902 aa20.35■□□□□ 0.85
CLN6-224ENST00000638076 SPCS2Q15005 226 aa20.35■□□□□ 0.85
CLN6-224ENST00000638076 MRM1Q6IN84 353 aaKnown RBP20.35■□□□□ 0.85
CLN6-224ENST00000638076 TAGAPQ8N103 731 aa20.35■□□□□ 0.85
CLN6-224ENST00000638076 MFSD9Q8NBP5 474 aa20.35■□□□□ 0.85
CLN6-224ENST00000638076 CCL4L1Q8NHW4 92 aa20.35■□□□□ 0.85
CLN6-224ENST00000638076 UTP15Q8TED0 518 aaKnown RBP20.35■□□□□ 0.85
CLN6-224ENST00000638076 TSACCQ96A04 125 aaPredicted RBP20.35■□□□□ 0.85
CLN6-224ENST00000638076 PSD2Q9BQI7 771 aa20.35■□□□□ 0.85
CLN6-224ENST00000638076 ACOT13Q9NPJ3 140 aa20.35■□□□□ 0.85
CLN6-224ENST00000638076 P2RX2Q9UBL9 471 aa20.35■□□□□ 0.85
CLN6-224ENST00000638076 TRPC4Q9UBN4 977 aa20.35■□□□□ 0.85
CLN6-224ENST00000638076 PRAMEF27A3QJZ7 478 aa20.35■□□□□ 0.85
CLN6-224ENST00000638076 MRPS14O60783 128 aaKnown RBP20.35■□□□□ 0.85
CLN6-224ENST00000638076 CBLP22681 906 aa20.35■□□□□ 0.85
CLN6-224ENST00000638076 ACVR2AP27037 513 aa20.35■□□□□ 0.85
CLN6-224ENST00000638076 CERS1P27544 350 aa20.35■□□□□ 0.85
CLN6-224ENST00000638076 ACSL1P33121 698 aa20.35■□□□□ 0.85
CLN6-224ENST00000638076 RAB8AP61006 207 aa20.35■□□□□ 0.85
CLN6-224ENST00000638076 CSNK2BP67870 215 aa20.35■□□□□ 0.85
CLN6-224ENST00000638076 CTF1Q16619 201 aa20.35■□□□□ 0.85
CLN6-224ENST00000638076 ZNF425Q6IV72 752 aa20.35■□□□□ 0.85
CLN6-224ENST00000638076 KIAA1324Q6UXG2 1013 aaKnown RBP20.35■□□□□ 0.85
CLN6-224ENST00000638076 AQP11Q8NBQ7 271 aa20.35■□□□□ 0.85
CLN6-224ENST00000638076 COL21A1Q96P44 957 aa20.35■□□□□ 0.85
CLN6-224ENST00000638076 ZNF607Q96SK3 696 aa20.35■□□□□ 0.85
CLN6-224ENST00000638076 TREX2Q9BQ50 279 aaPredicted RBP20.35■□□□□ 0.85
CLN6-224ENST00000638076 PLGRKTQ9HBL7 147 aa20.35■□□□□ 0.85
CLN6-224ENST00000638076 ZSCAN32Q9NX65 697 aa20.35■□□□□ 0.85
CLN6-224ENST00000638076 OR6C2Q9NZP2 312 aa20.35■□□□□ 0.85
CLN6-224ENST00000638076 APOBEC3BQ9UH17 382 aaKnown RBP20.35■□□□□ 0.85
CLN6-224ENST00000638076 PIAS3Q9Y6X2 628 aa20.35■□□□□ 0.85
CLN6-224ENST00000638076 SNRNP200O75643 2136 aaKnown RBP20.34■□□□□ 0.85
CLN6-224ENST00000638076 GASTP01350 101 aa20.34■□□□□ 0.85
CLN6-224ENST00000638076 ALPPL2P10696 532 aa20.34■□□□□ 0.85
CLN6-224ENST00000638076 PSMB9P28065 219 aa20.34■□□□□ 0.85
CLN6-224ENST00000638076 DGCR6Q14129 220 aa20.34■□□□□ 0.85
CLN6-224ENST00000638076 ZNF750Q32MQ0 723 aa20.34■□□□□ 0.85
CLN6-224ENST00000638076 COLEC12Q5KU26 742 aa20.34■□□□□ 0.85
CLN6-224ENST00000638076 SYT6Q5T7P8 510 aaPredicted RBP20.34■□□□□ 0.85
CLN6-224ENST00000638076 ZBTB46Q86UZ6 589 aa20.34■□□□□ 0.85
CLN6-224ENST00000638076 CCDC103Q8IW40 242 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms