RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 PROM1O43490 865 aa17.04■□□□□ 0.32
CLN6-220ENST00000637450 DYRK3O43781 588 aa17.04■□□□□ 0.32
CLN6-220ENST00000637450 ATP6AP2O75787 350 aa17.04■□□□□ 0.32
CLN6-220ENST00000637450 NADKO95544 446 aaPredicted RBP17.04■□□□□ 0.32
CLN6-220ENST00000637450 CELA3AP09093 270 aa17.04■□□□□ 0.32
CLN6-220ENST00000637450 ALOX15P16050 662 aaPredicted RBP17.04■□□□□ 0.32
CLN6-220ENST00000637450 PTX3P26022 381 aaPredicted RBP17.04■□□□□ 0.32
CLN6-220ENST00000637450 PIGAP37287 484 aa17.04■□□□□ 0.32
CLN6-220ENST00000637450 RAP1GDS1P52306 607 aa17.04■□□□□ 0.32
CLN6-220ENST00000637450 PLIN5Q00G26 463 aa17.04■□□□□ 0.32
CLN6-220ENST00000637450 TNFRSF17Q02223 184 aa17.04■□□□□ 0.32
CLN6-220ENST00000637450 SLC22A10Q63ZE4 541 aa17.04■□□□□ 0.32
CLN6-220ENST00000637450 ZNF585AQ6P3V2 769 aa17.04■□□□□ 0.32
CLN6-220ENST00000637450 ADGRD1Q6QNK2 874 aa17.04■□□□□ 0.32
CLN6-220ENST00000637450 LYPD8Q6UX82 237 aa17.04■□□□□ 0.32
CLN6-220ENST00000637450 CCDC91Q7Z6B0 441 aa17.04■□□□□ 0.32
CLN6-220ENST00000637450 CDH24Q86UP0 819 aa17.04■□□□□ 0.32
CLN6-220ENST00000637450 DMRTC2Q8IXT2 367 aaPredicted RBP17.04■□□□□ 0.32
CLN6-220ENST00000637450 SLC22A8Q8TCC7 542 aa17.04■□□□□ 0.32
CLN6-220ENST00000637450 PAQR8Q8TEZ7 354 aa17.04■□□□□ 0.32
CLN6-220ENST00000637450 KCTD4Q8WVF5 259 aa17.04■□□□□ 0.32
CLN6-220ENST00000637450 FBXL20Q96IG2 436 aa17.04■□□□□ 0.32
CLN6-220ENST00000637450 ART5Q96L15 291 aa17.04■□□□□ 0.32
CLN6-220ENST00000637450 TTYH2Q9BSA4 534 aa17.04■□□□□ 0.32
CLN6-220ENST00000637450 PHF11Q9UIL8 331 aa17.04■□□□□ 0.32
CLN6-220ENST00000637450 PCDHGA11Q9Y5H2 935 aa17.04■□□□□ 0.32
CLN6-220ENST00000637450 FAM215AQ9Y5M1 114 aa17.04■□□□□ 0.32
CLN6-220ENST00000637450 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.04■□□□□ 0.32
CLN6-220ENST00000637450 A0A087X1B8 175 aa17.03■□□□□ 0.32
CLN6-220ENST00000637450 FIGNL2A6NMB9 653 aa17.03■□□□□ 0.32
CLN6-220ENST00000637450 H0YIV9 168 aa17.03■□□□□ 0.32
CLN6-220ENST00000637450 C2P06681 752 aa17.03■□□□□ 0.32
CLN6-220ENST00000637450 HOXD4P09016 255 aaPredicted RBP17.03■□□□□ 0.32
CLN6-220ENST00000637450 GLI4P10075 376 aa17.03■□□□□ 0.32
CLN6-220ENST00000637450 MAN2A2P49641 1150 aa17.03■□□□□ 0.32
CLN6-220ENST00000637450 HNRNPH2P55795 449 aaKnown RBP17.03■□□□□ 0.32
CLN6-220ENST00000637450 RPS13P62277 151 aaKnown RBP17.03■□□□□ 0.32
CLN6-220ENST00000637450 IRF9Q00978 393 aa17.03■□□□□ 0.32
CLN6-220ENST00000637450 SETDB1Q15047 1291 aa17.03■□□□□ 0.32
CLN6-220ENST00000637450 PFKFB4Q16877 469 aa17.03■□□□□ 0.32
CLN6-220ENST00000637450 FAM83EQ2M2I3 478 aa17.03■□□□□ 0.32
CLN6-220ENST00000637450 RTL6Q6ICC9 239 aa17.03■□□□□ 0.32
CLN6-220ENST00000637450 MRM1Q6IN84 353 aaKnown RBP17.03■□□□□ 0.32
CLN6-220ENST00000637450 B3GNT6Q6ZMB0 384 aa17.03■□□□□ 0.32
CLN6-220ENST00000637450 MYLK4Q86YV6 388 aaPredicted RBP17.03■□□□□ 0.32
CLN6-220ENST00000637450 ST13P4Q8IZP2 240 aaPredicted RBP17.03■□□□□ 0.32
CLN6-220ENST00000637450 OR10Q1Q8NGQ4 319 aa17.03■□□□□ 0.32
CLN6-220ENST00000637450 SPACA9Q96E40 222 aaPredicted RBP17.03■□□□□ 0.32
CLN6-220ENST00000637450 ZNF717Q9BY31 904 aaPredicted RBP17.03■□□□□ 0.32
CLN6-220ENST00000637450 RAB17Q9H0T7 212 aa17.03■□□□□ 0.32
CLN6-220ENST00000637450 ACTR8Q9H981 624 aa17.03■□□□□ 0.32
CLN6-220ENST00000637450 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.03■□□□□ 0.32
CLN6-220ENST00000637450 PSD3Q9NYI0 1048 aa17.03■□□□□ 0.32
CLN6-220ENST00000637450 TNFRSF10DQ9UBN6 386 aa17.03■□□□□ 0.32
CLN6-220ENST00000637450 ACAD8Q9UKU7 415 aa17.03■□□□□ 0.32
CLN6-220ENST00000637450 ASB4Q9Y574 426 aa17.03■□□□□ 0.32
CLN6-220ENST00000637450 ANGPTL3Q9Y5C1 460 aa17.03■□□□□ 0.32
CLN6-220ENST00000637450 SPG11Q96JI7 2443 aa17.03■□□□□ 0.32
CLN6-220ENST00000637450 ZFHX3Q15911 3703 aa17.02■□□□□ 0.32
CLN6-220ENST00000637450 HMX2A2RU54 273 aa17.02■□□□□ 0.32
CLN6-220ENST00000637450 WASHC1A8K0Z3 465 aa17.02■□□□□ 0.32
CLN6-220ENST00000637450 KLK8O60259 260 aa17.02■□□□□ 0.32
CLN6-220ENST00000637450 UGDHO60701 494 aa17.02■□□□□ 0.32
CLN6-220ENST00000637450 HCN1O60741 890 aa17.02■□□□□ 0.32
CLN6-220ENST00000637450 PRKRAO75569 313 aaKnown RBP17.02■□□□□ 0.32
CLN6-220ENST00000637450 GPR75O95800 540 aa17.02■□□□□ 0.32
CLN6-220ENST00000637450 BSGP35613 385 aa17.02■□□□□ 0.32
CLN6-220ENST00000637450 BUD31P41223 144 aaPredicted RBP17.02■□□□□ 0.32
CLN6-220ENST00000637450 ALDH18A1P54886 795 aaKnown RBP17.02■□□□□ 0.32
CLN6-220ENST00000637450 TBL3Q12788 808 aaKnown RBP17.02■□□□□ 0.32
CLN6-220ENST00000637450 ACAP2Q15057 778 aa17.02■□□□□ 0.32
CLN6-220ENST00000637450 PCBP2Q15366 365 aaKnown RBP eCLIP17.02■□□□□ 0.32
CLN6-220ENST00000637450 MROH9Q5TGP6 573 aa17.02■□□□□ 0.32
CLN6-220ENST00000637450 DOK4Q8TEW6 326 aa17.02■□□□□ 0.32
CLN6-220ENST00000637450 SARAFQ96BY9 339 aa17.02■□□□□ 0.32
CLN6-220ENST00000637450 PELOQ9BRX2 385 aaKnown RBP17.02■□□□□ 0.32
CLN6-220ENST00000637450 LDAHQ9H6V9 325 aa17.02■□□□□ 0.32
CLN6-220ENST00000637450 DDX31Q9H8H2 851 aaKnown RBP17.02■□□□□ 0.32
CLN6-220ENST00000637450 PROK2Q9HC23 129 aa17.02■□□□□ 0.32
CLN6-220ENST00000637450 RYDENQ9NUL5 291 aaKnown RBP17.02■□□□□ 0.32
CLN6-220ENST00000637450 LYARQ9NX58 379 aaKnown RBP17.02■□□□□ 0.32
CLN6-220ENST00000637450 INTS1Q8N201 2190 aaKnown RBP17.01■□□□□ 0.31
CLN6-220ENST00000637450 A0A0A6YYD5 115 aa17.01■□□□□ 0.31
CLN6-220ENST00000637450 TRGV5A0A0B4J1U4 118 aa17.01■□□□□ 0.31
CLN6-220ENST00000637450 IQANK1A0A1B0GTG1 560 aa17.01■□□□□ 0.31
CLN6-220ENST00000637450 A0A1W2PR48 441 aa17.01■□□□□ 0.31
CLN6-220ENST00000637450 LRRC14BA6NHZ5 514 aa17.01■□□□□ 0.31
CLN6-220ENST00000637450 WDR1O75083 606 aa17.01■□□□□ 0.31
CLN6-220ENST00000637450 EEDO75530 441 aaKnown RBP17.01■□□□□ 0.31
CLN6-220ENST00000637450 FBXO45P0C2W1 286 aa17.01■□□□□ 0.31
CLN6-220ENST00000637450 RFPL3SP0C7P2 107 aa17.01■□□□□ 0.31
CLN6-220ENST00000637450 GFAPP14136 432 aa17.01■□□□□ 0.31
CLN6-220ENST00000637450 SLC37A1P57057 533 aa17.01■□□□□ 0.31
CLN6-220ENST00000637450 HERVK_113P63132 956 aa17.01■□□□□ 0.31
CLN6-220ENST00000637450 ERVK-8P63133 956 aa17.01■□□□□ 0.31
CLN6-220ENST00000637450 PHEXP78562 749 aa17.01■□□□□ 0.31
CLN6-220ENST00000637450 CUL3Q13618 768 aa17.01■□□□□ 0.31
CLN6-220ENST00000637450 ZNF267Q14586 743 aaPredicted RBP17.01■□□□□ 0.31
CLN6-220ENST00000637450 CPSF6Q16630 551 aaKnown RBP eCLIP17.01■□□□□ 0.31
CLN6-220ENST00000637450 SPRED3Q2MJR0 410 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms