RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 RAB43Q86YS6 212 aa6.32□□□□□ -1.4
UPF3B-205ENST00000636792 ZC3H7AQ8IWR0 971 aaKnown RBP6.32□□□□□ -1.4
UPF3B-205ENST00000636792 CACNA2D3Q8IZS8 1091 aa6.32□□□□□ -1.4
UPF3B-205ENST00000636792 MIER2Q8N344 545 aa6.32□□□□□ -1.4
UPF3B-205ENST00000636792 CPSF7Q8N684 471 aaKnown RBP6.32□□□□□ -1.4
UPF3B-205ENST00000636792 PLPP5Q8NEB5 264 aa6.32□□□□□ -1.4
UPF3B-205ENST00000636792 VPS37AQ8NEZ2 397 aa6.32□□□□□ -1.4
UPF3B-205ENST00000636792 OR8J2Q8NGG1 315 aa6.32□□□□□ -1.4
UPF3B-205ENST00000636792 OR51Q1Q8NH59 317 aa6.32□□□□□ -1.4
UPF3B-205ENST00000636792 ZFP28Q8NHY6 868 aa6.32□□□□□ -1.4
UPF3B-205ENST00000636792 DNAJB14Q8TBM8 379 aa6.32□□□□□ -1.4
UPF3B-205ENST00000636792 STT3BQ8TCJ2 826 aa6.32□□□□□ -1.4
UPF3B-205ENST00000636792 C16orf78Q8WTQ4 265 aa6.32□□□□□ -1.4
UPF3B-205ENST00000636792 FGF11Q92914 225 aa6.32□□□□□ -1.4
UPF3B-205ENST00000636792 MR1Q95460 341 aa6.32□□□□□ -1.4
UPF3B-205ENST00000636792 COL26A1Q96A83 441 aa6.32□□□□□ -1.4
UPF3B-205ENST00000636792 MIEF2Q96C03 454 aa6.32□□□□□ -1.4
UPF3B-205ENST00000636792 RILPQ96NA2 401 aa6.32□□□□□ -1.4
UPF3B-205ENST00000636792 ZBTB18Q99592 522 aa6.32□□□□□ -1.4
UPF3B-205ENST00000636792 TMEM120AQ9BXJ8 343 aa6.32□□□□□ -1.4
UPF3B-205ENST00000636792 GSX2Q9BZM3 304 aa6.32□□□□□ -1.4
UPF3B-205ENST00000636792 TSPAN10Q9H1Z9 355 aaPredicted RBP6.32□□□□□ -1.4
UPF3B-205ENST00000636792 REEP4Q9H6H4 257 aa6.32□□□□□ -1.4
UPF3B-205ENST00000636792 RPF2Q9H7B2 306 aaKnown RBP6.32□□□□□ -1.4
UPF3B-205ENST00000636792 KCNK13Q9HB14 408 aa6.32□□□□□ -1.4
UPF3B-205ENST00000636792 ACSS1Q9NUB1 689 aaPredicted RBP6.32□□□□□ -1.4
UPF3B-205ENST00000636792 FAM120CQ9NX05 1096 aaKnown RBP6.32□□□□□ -1.4
UPF3B-205ENST00000636792 TRPC4Q9UBN4 977 aa6.32□□□□□ -1.4
UPF3B-205ENST00000636792 ATP6V1HQ9UI12 483 aa6.32□□□□□ -1.4
UPF3B-205ENST00000636792 KLK13Q9UKR3 277 aa6.32□□□□□ -1.4
UPF3B-205ENST00000636792 ENTPD4Q9Y227 616 aa6.32□□□□□ -1.4
UPF3B-205ENST00000636792 ARL2BPQ9Y2Y0 163 aa6.32□□□□□ -1.4
UPF3B-205ENST00000636792 MRPS2Q9Y399 296 aaKnown RBP6.32□□□□□ -1.4
UPF3B-205ENST00000636792 POLR3HQ9Y535 204 aaPredicted RBP6.32□□□□□ -1.4
UPF3B-205ENST00000636792 PCDHA9Q9Y5H5 950 aa6.32□□□□□ -1.4
UPF3B-205ENST00000636792 PTGDR2Q9Y5Y4 395 aa6.32□□□□□ -1.4
UPF3B-205ENST00000636792 WDR87Q6ZQQ6 2873 aa6.32□□□□□ -1.4
UPF3B-205ENST00000636792 DMXL1Q9Y485 3027 aa6.32□□□□□ -1.4
UPF3B-205ENST00000636792 LOC102723996A0A087X1L8 192 aa6.31□□□□□ -1.4
UPF3B-205ENST00000636792 TCRBV16S1A1N1A0A5B0 115 aa6.31□□□□□ -1.4
UPF3B-205ENST00000636792 BBIP1A8MTZ0 92 aa6.31□□□□□ -1.4
UPF3B-205ENST00000636792 SAP18O00422 153 aaKnown RBP6.31□□□□□ -1.4
UPF3B-205ENST00000636792 RTCAO00442 366 aaKnown RBP6.31□□□□□ -1.4
UPF3B-205ENST00000636792 RNASET2O00584 256 aaKnown RBP6.31□□□□□ -1.4
UPF3B-205ENST00000636792 NDUFAB1O14561 156 aa6.31□□□□□ -1.4
UPF3B-205ENST00000636792 SCAMP2O15127 329 aaKnown RBP6.31□□□□□ -1.4
UPF3B-205ENST00000636792 CTNSO60931 367 aa6.31□□□□□ -1.4
UPF3B-205ENST00000636792 BCAS2O75934 225 aaPredicted RBP6.31□□□□□ -1.4
UPF3B-205ENST00000636792 SOX30O94993 753 aa6.31□□□□□ -1.4
UPF3B-205ENST00000636792 MED26O95402 600 aa6.31□□□□□ -1.4
UPF3B-205ENST00000636792 AIFM1O95831 613 aa6.31□□□□□ -1.4
UPF3B-205ENST00000636792 NTRK1P04629 796 aa6.31□□□□□ -1.4
UPF3B-205ENST00000636792 ATP1B1P05026 303 aa6.31□□□□□ -1.4
UPF3B-205ENST00000636792 CTSBP07858 339 aa6.31□□□□□ -1.4
UPF3B-205ENST00000636792 IL3P08700 152 aa6.31□□□□□ -1.4
UPF3B-205ENST00000636792 ALDOCP09972 364 aaKnown RBP6.31□□□□□ -1.4
UPF3B-205ENST00000636792 ZGLP1P0C6A0 271 aa6.31□□□□□ -1.4
UPF3B-205ENST00000636792 G6PDP11413 515 aa6.31□□□□□ -1.4
UPF3B-205ENST00000636792 COX7A2P14406 83 aa6.31□□□□□ -1.4
UPF3B-205ENST00000636792 ZNF28P17035 718 aa6.31□□□□□ -1.4
UPF3B-205ENST00000636792 MMP11P24347 488 aa6.31□□□□□ -1.4
UPF3B-205ENST00000636792 PIK3R1P27986 724 aa6.31□□□□□ -1.4
UPF3B-205ENST00000636792 NTSP30990 170 aa6.31□□□□□ -1.4
UPF3B-205ENST00000636792 FRKP42685 505 aaPredicted RBP6.31□□□□□ -1.4
UPF3B-205ENST00000636792 MAGEA8P43361 318 aa6.31□□□□□ -1.4
UPF3B-205ENST00000636792 GP2P55259 537 aaKnown RBP6.31□□□□□ -1.4
UPF3B-205ENST00000636792 TAS2R50P59544 299 aa6.31□□□□□ -1.4
UPF3B-205ENST00000636792 TXNL4AP83876 142 aaKnown RBP6.31□□□□□ -1.4
UPF3B-205ENST00000636792 RUNX2Q13950 521 aa6.31□□□□□ -1.4
UPF3B-205ENST00000636792 RCAN2Q14206 197 aa6.31□□□□□ -1.4
UPF3B-205ENST00000636792 SSPNQ14714 243 aa6.31□□□□□ -1.4
UPF3B-205ENST00000636792 RPS6KA2Q15349 733 aa6.31□□□□□ -1.4
UPF3B-205ENST00000636792 SPRED3Q2MJR0 410 aa6.31□□□□□ -1.4
UPF3B-205ENST00000636792 COQ5Q5HYK3 327 aa6.31□□□□□ -1.4
UPF3B-205ENST00000636792 C6orf163Q5TEZ5 329 aa6.31□□□□□ -1.4
UPF3B-205ENST00000636792 IL23RQ5VWK5 629 aa6.31□□□□□ -1.4
UPF3B-205ENST00000636792 SCIMPQ6UWF3 145 aa6.31□□□□□ -1.4
UPF3B-205ENST00000636792 PRSS41Q7RTY9 318 aa6.31□□□□□ -1.4
UPF3B-205ENST00000636792 RIMKLAQ8IXN7 391 aa6.31□□□□□ -1.4
UPF3B-205ENST00000636792 ST13P4Q8IZP2 240 aaPredicted RBP6.31□□□□□ -1.4
UPF3B-205ENST00000636792 LRRC25Q8N386 305 aaPredicted RBP6.31□□□□□ -1.4
UPF3B-205ENST00000636792 LIX1Q8N485 282 aa6.31□□□□□ -1.4
UPF3B-205ENST00000636792 RNF175Q8N4F7 328 aa6.31□□□□□ -1.4
UPF3B-205ENST00000636792 IL22RA1Q8N6P7 574 aa6.31□□□□□ -1.4
UPF3B-205ENST00000636792 SLC38A9Q8NBW4 561 aa6.31□□□□□ -1.4
UPF3B-205ENST00000636792 OR4K14Q8NGD5 310 aa6.31□□□□□ -1.4
UPF3B-205ENST00000636792 ZNF675Q8TD23 568 aa6.31□□□□□ -1.4
UPF3B-205ENST00000636792 KCNE4Q8WWG9 221 aa6.31□□□□□ -1.4
UPF3B-205ENST00000636792 METTL21AQ8WXB1 218 aa6.31□□□□□ -1.4
UPF3B-205ENST00000636792 THAP4Q8WY91 577 aa6.31□□□□□ -1.4
UPF3B-205ENST00000636792 DAZLQ92904 295 aaKnown RBP6.31□□□□□ -1.4
UPF3B-205ENST00000636792 GATA6Q92908 595 aa6.31□□□□□ -1.4
UPF3B-205ENST00000636792 NKD1Q969G9 470 aa6.31□□□□□ -1.4
UPF3B-205ENST00000636792 PPCDCQ96CD2 204 aa6.31□□□□□ -1.4
UPF3B-205ENST00000636792 TM4SF18Q96CE8 201 aa6.31□□□□□ -1.4
UPF3B-205ENST00000636792 ZBED6CLQ96FA7 236 aaPredicted RBP6.31□□□□□ -1.4
UPF3B-205ENST00000636792 SLC45A3Q96JT2 553 aa6.31□□□□□ -1.4
UPF3B-205ENST00000636792 OR52B2Q96RD2 323 aa6.31□□□□□ -1.4
UPF3B-205ENST00000636792 CCT8L2Q96SF2 557 aa6.31□□□□□ -1.4
UPF3B-205ENST00000636792 MAPKAP1Q9BPZ7 522 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms