RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 EXO1Q9UQ84 846 aaKnown RBP6.8□□□□□ -1.32
BRCA1-230ENST00000634433 TICRRQ7Z2Z1 1910 aa6.8□□□□□ -1.32
BRCA1-230ENST00000634433 COL6A3P12111 3177 aa6.8□□□□□ -1.32
BRCA1-230ENST00000634433 F5P12259 2224 aa6.8□□□□□ -1.32
BRCA1-230ENST00000634433 A0A1W2PPL8 197 aa6.8□□□□□ -1.32
BRCA1-230ENST00000634433 FEZF1A0PJY2 475 aa6.8□□□□□ -1.32
BRCA1-230ENST00000634433 TXNL1O43396 289 aa6.8□□□□□ -1.32
BRCA1-230ENST00000634433 SUV39H1O43463 412 aa6.8□□□□□ -1.32
BRCA1-230ENST00000634433 NOBOXO60393 691 aa6.8□□□□□ -1.32
BRCA1-230ENST00000634433 DPM1O60762 260 aa6.8□□□□□ -1.32
BRCA1-230ENST00000634433 GBAP04062 536 aa6.8□□□□□ -1.32
BRCA1-230ENST00000634433 NTRK1P04629 796 aa6.8□□□□□ -1.32
BRCA1-230ENST00000634433 NUDT1P36639 197 aa6.8□□□□□ -1.32
BRCA1-230ENST00000634433 PPP2CBP62714 309 aa6.8□□□□□ -1.32
BRCA1-230ENST00000634433 PPP2CAP67775 309 aa6.8□□□□□ -1.32
BRCA1-230ENST00000634433 HBA1P69905 142 aa6.8□□□□□ -1.32
BRCA1-230ENST00000634433 ADARB1P78563 741 aaKnown RBP6.8□□□□□ -1.32
BRCA1-230ENST00000634433 TFF2Q03403 129 aa6.8□□□□□ -1.32
BRCA1-230ENST00000634433 TGM3Q08188 693 aa6.8□□□□□ -1.32
BRCA1-230ENST00000634433 PMS2P11Q13670 270 aa6.8□□□□□ -1.32
BRCA1-230ENST00000634433 APOFQ13790 326 aa6.8□□□□□ -1.32
BRCA1-230ENST00000634433 SPIDRQ14159 915 aa6.8□□□□□ -1.32
BRCA1-230ENST00000634433 GK3PQ14409 553 aa6.8□□□□□ -1.32
BRCA1-230ENST00000634433 NKG7Q16617 165 aa6.8□□□□□ -1.32
BRCA1-230ENST00000634433 ZNF630Q2M218 657 aaPredicted RBP6.8□□□□□ -1.32
BRCA1-230ENST00000634433 IER5LQ5T953 404 aa6.8□□□□□ -1.32
BRCA1-230ENST00000634433 GPR139Q6DWJ6 353 aa6.8□□□□□ -1.32
BRCA1-230ENST00000634433 OR4C11Q6IEV9 310 aa6.8□□□□□ -1.32
BRCA1-230ENST00000634433 OR2T5Q6IEZ7 315 aa6.8□□□□□ -1.32
BRCA1-230ENST00000634433 LYPD8Q6UX82 237 aa6.8□□□□□ -1.32
BRCA1-230ENST00000634433 ANGPTL8Q6UXH0 198 aa6.8□□□□□ -1.32
BRCA1-230ENST00000634433 TMEM26Q6ZUK4 368 aa6.8□□□□□ -1.32
BRCA1-230ENST00000634433 ZNF551Q7Z340 670 aaPredicted RBP6.8□□□□□ -1.32
BRCA1-230ENST00000634433 PIWIL3Q7Z3Z3 882 aaKnown RBP6.8□□□□□ -1.32
BRCA1-230ENST00000634433 FAM86B1Q8N7N1 296 aa6.8□□□□□ -1.32
BRCA1-230ENST00000634433 OR2A1Q8NGT9 310 aa6.8□□□□□ -1.32
BRCA1-230ENST00000634433 OR2T29Q8NH02 315 aa6.8□□□□□ -1.32
BRCA1-230ENST00000634433 DGCR14Q96DF8 476 aaKnown RBP6.8□□□□□ -1.32
BRCA1-230ENST00000634433 TSC22D3Q99576 134 aa6.8□□□□□ -1.32
BRCA1-230ENST00000634433 CHST8Q9H2A9 424 aa6.8□□□□□ -1.32
BRCA1-230ENST00000634433 TMEM38AQ9H6F2 299 aa6.8□□□□□ -1.32
BRCA1-230ENST00000634433 DDX31Q9H8H2 851 aaKnown RBP6.8□□□□□ -1.32
BRCA1-230ENST00000634433 FGF22Q9HCT0 170 aa6.8□□□□□ -1.32
BRCA1-230ENST00000634433 POLMQ9NP87 494 aaPredicted RBP6.8□□□□□ -1.32
BRCA1-230ENST00000634433 PRDM8Q9NQV8 689 aa6.8□□□□□ -1.32
BRCA1-230ENST00000634433 H2AFY2Q9P0M6 372 aaPredicted RBP6.8□□□□□ -1.32
BRCA1-230ENST00000634433 C3orf18Q9UK00 162 aa6.8□□□□□ -1.32
BRCA1-230ENST00000634433 PLEKHM1Q9Y4G2 1056 aa6.8□□□□□ -1.32
BRCA1-230ENST00000634433 ZNF318Q5VUA4 2279 aa6.79□□□□□ -1.32
BRCA1-230ENST00000634433 TCRBV21S2A2A0A5A6 115 aa6.79□□□□□ -1.32
BRCA1-230ENST00000634433 POM121BA6NF01 834 aa6.79□□□□□ -1.32
BRCA1-230ENST00000634433 C2CD4DB7Z1M9 353 aa6.79□□□□□ -1.32
BRCA1-230ENST00000634433 MAN2B1O00754 1011 aa6.79□□□□□ -1.32
BRCA1-230ENST00000634433 PRICKLE3O43900 615 aaPredicted RBP6.79□□□□□ -1.32
BRCA1-230ENST00000634433 FMO6PO60774 539 aa6.79□□□□□ -1.32
BRCA1-230ENST00000634433 KLHL18O94889 574 aa6.79□□□□□ -1.32
BRCA1-230ENST00000634433 SNAP29O95721 258 aa6.79□□□□□ -1.32
BRCA1-230ENST00000634433 TFAP2AP05549 437 aa6.79□□□□□ -1.32
BRCA1-230ENST00000634433 CDH2P19022 906 aaPredicted RBP6.79□□□□□ -1.32
BRCA1-230ENST00000634433 EFNA1P20827 205 aaPredicted RBP6.79□□□□□ -1.32
BRCA1-230ENST00000634433 PSMB5P28074 263 aa6.79□□□□□ -1.32
BRCA1-230ENST00000634433 TSFMP43897 325 aaKnown RBP6.79□□□□□ -1.32
BRCA1-230ENST00000634433 TPMTP51580 245 aa6.79□□□□□ -1.32
BRCA1-230ENST00000634433 MANFP55145 182 aaKnown RBP6.79□□□□□ -1.32
BRCA1-230ENST00000634433 CYP4F2P78329 520 aa6.79□□□□□ -1.32
BRCA1-230ENST00000634433 MC1RQ01726 317 aa6.79□□□□□ -1.32
BRCA1-230ENST00000634433 LRRC32Q14392 662 aa6.79□□□□□ -1.32
BRCA1-230ENST00000634433 ABHD17CQ6PCB6 329 aa6.79□□□□□ -1.32
BRCA1-230ENST00000634433 TBPL2Q6SJ96 375 aa6.79□□□□□ -1.32
BRCA1-230ENST00000634433 ZNF574Q6ZN55 896 aaPredicted RBP6.79□□□□□ -1.32
BRCA1-230ENST00000634433 USP51Q70EK9 711 aa6.79□□□□□ -1.32
BRCA1-230ENST00000634433 PEX5LQ8IYB4 626 aa6.79□□□□□ -1.32
BRCA1-230ENST00000634433 NAGSQ8N159 534 aa6.79□□□□□ -1.32
BRCA1-230ENST00000634433 C10orf111Q8N326 155 aa6.79□□□□□ -1.32
BRCA1-230ENST00000634433 ZNF786Q8N393 782 aa6.79□□□□□ -1.32
BRCA1-230ENST00000634433 CLRN3Q8NCR9 226 aa6.79□□□□□ -1.32
BRCA1-230ENST00000634433 CEP76Q8TAP6 659 aa6.79□□□□□ -1.32
BRCA1-230ENST00000634433 PNPT1Q8TCS8 783 aaKnown RBP6.79□□□□□ -1.32
BRCA1-230ENST00000634433 LCN9Q8WX39 176 aa6.79□□□□□ -1.32
BRCA1-230ENST00000634433 OR1E3Q8WZA6 343 aa6.79□□□□□ -1.32
BRCA1-230ENST00000634433 FAM3CQ92520 227 aa6.79□□□□□ -1.32
BRCA1-230ENST00000634433 ZBED6CLQ96FA7 236 aaPredicted RBP6.79□□□□□ -1.32
BRCA1-230ENST00000634433 CDC6Q99741 560 aa6.79□□□□□ -1.32
BRCA1-230ENST00000634433 MYOCQ99972 504 aa6.79□□□□□ -1.32
BRCA1-230ENST00000634433 YIPF3Q9GZM5 350 aa6.79□□□□□ -1.32
BRCA1-230ENST00000634433 SLC6A16Q9GZN6 736 aa6.79□□□□□ -1.32
BRCA1-230ENST00000634433 WNT5BQ9H1J7 359 aa6.79□□□□□ -1.32
BRCA1-230ENST00000634433 XKR8Q9H6D3 395 aa6.79□□□□□ -1.32
BRCA1-230ENST00000634433 ACSS1Q9NUB1 689 aaPredicted RBP6.79□□□□□ -1.32
BRCA1-230ENST00000634433 TRNAU1APQ9NX07 287 aaKnown RBP6.79□□□□□ -1.32
BRCA1-230ENST00000634433 ZSCAN32Q9NX65 697 aa6.79□□□□□ -1.32
BRCA1-230ENST00000634433 THUMPD1Q9NXG2 353 aaKnown RBP6.79□□□□□ -1.32
BRCA1-230ENST00000634433 TAAR2Q9P1P5 351 aa6.79□□□□□ -1.32
BRCA1-230ENST00000634433 ERVK-11Q9UQG0 969 aa6.79□□□□□ -1.32
BRCA1-230ENST00000634433 LRIT2A6NDA9 550 aa6.79□□□□□ -1.32
BRCA1-230ENST00000634433 OR52A4PA6NMU1 304 aa6.79□□□□□ -1.32
BRCA1-230ENST00000634433 LATO43561 262 aa6.79□□□□□ -1.32
BRCA1-230ENST00000634433 BMP10O95393 424 aa6.79□□□□□ -1.32
BRCA1-230ENST00000634433 SERPIND1P05546 499 aa6.79□□□□□ -1.32
BRCA1-230ENST00000634433 FPR1P21462 350 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms