RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 C18orf63Q68DL7 685 aa17.47■□□□□ 0.39
SMN2-215ENST00000628696 ADGRD1Q6QNK2 874 aa17.47■□□□□ 0.39
SMN2-215ENST00000628696 LAS2Q8IYD9 372 aa17.47■□□□□ 0.39
SMN2-215ENST00000628696 LIX1Q8N485 282 aa17.47■□□□□ 0.39
SMN2-215ENST00000628696 SLC15A4Q8N697 577 aa17.47■□□□□ 0.39
SMN2-215ENST00000628696 OR7G3Q8NG95 312 aa17.47■□□□□ 0.39
SMN2-215ENST00000628696 PAQR8Q8TEZ7 354 aa17.47■□□□□ 0.39
SMN2-215ENST00000628696 ART5Q96L15 291 aa17.47■□□□□ 0.39
SMN2-215ENST00000628696 GPATCH1Q9BRR8 931 aaKnown RBP17.47■□□□□ 0.39
SMN2-215ENST00000628696 ALG9Q9H6U8 611 aa17.47■□□□□ 0.39
SMN2-215ENST00000628696 SH2D2AQ9NP31 389 aa17.47■□□□□ 0.39
SMN2-215ENST00000628696 SUPT3HB4E1H0 165 aa17.46■□□□□ 0.39
SMN2-215ENST00000628696 CCDC188H7C350 402 aa17.46■□□□□ 0.39
SMN2-215ENST00000628696 SUPT3HO75486 399 aa17.46■□□□□ 0.39
SMN2-215ENST00000628696 PRKRAO75569 313 aaKnown RBP17.46■□□□□ 0.39
SMN2-215ENST00000628696 SCELO95171 688 aa17.46■□□□□ 0.39
SMN2-215ENST00000628696 IGKV3-11P04433 115 aa17.46■□□□□ 0.39
SMN2-215ENST00000628696 ALOX15P16050 662 aaPredicted RBP17.46■□□□□ 0.39
SMN2-215ENST00000628696 TLX1P31314 330 aaPredicted RBP17.46■□□□□ 0.39
SMN2-215ENST00000628696 GP5P40197 560 aa17.46■□□□□ 0.39
SMN2-215ENST00000628696 HERVK_113P63132 956 aa17.46■□□□□ 0.39
SMN2-215ENST00000628696 ERVK-8P63133 956 aa17.46■□□□□ 0.39
SMN2-215ENST00000628696 TBL3Q12788 808 aaKnown RBP17.46■□□□□ 0.39
SMN2-215ENST00000628696 BIKQ13323 160 aa17.46■□□□□ 0.39
SMN2-215ENST00000628696 DEPDC1Q5TB30 811 aa17.46■□□□□ 0.39
SMN2-215ENST00000628696 LYPD8Q6UX82 237 aa17.46■□□□□ 0.39
SMN2-215ENST00000628696 RAPH1Q70E73 1250 aa17.46■□□□□ 0.39
SMN2-215ENST00000628696 SLC29A4Q7RTT9 530 aa17.46■□□□□ 0.39
SMN2-215ENST00000628696 GPR180Q86V85 440 aa17.46■□□□□ 0.39
SMN2-215ENST00000628696 MYLK4Q86YV6 388 aaPredicted RBP17.46■□□□□ 0.39
SMN2-215ENST00000628696 CTAGE3PQ8IX95 158 aa17.46■□□□□ 0.39
SMN2-215ENST00000628696 FBXW8Q8N3Y1 598 aa17.46■□□□□ 0.39
SMN2-215ENST00000628696 CHDHQ8NE62 594 aaPredicted RBP17.46■□□□□ 0.39
SMN2-215ENST00000628696 OR10G3Q8NGC4 313 aa17.46■□□□□ 0.39
SMN2-215ENST00000628696 STAG3L4Q8TBR4 150 aa17.46■□□□□ 0.39
SMN2-215ENST00000628696 TANKQ92844 425 aa17.46■□□□□ 0.39
SMN2-215ENST00000628696 RGMAQ96B86 450 aa17.46■□□□□ 0.39
SMN2-215ENST00000628696 FBXL20Q96IG2 436 aa17.46■□□□□ 0.39
SMN2-215ENST00000628696 UBXN10Q96LJ8 280 aa17.46■□□□□ 0.39
SMN2-215ENST00000628696 FOXC2Q99958 501 aa17.46■□□□□ 0.39
SMN2-215ENST00000628696 TMUB1Q9BVT8 246 aa17.46■□□□□ 0.39
SMN2-215ENST00000628696 ERVK-6Q9BXR3 956 aa17.46■□□□□ 0.39
SMN2-215ENST00000628696 LIME1Q9H400 295 aa17.46■□□□□ 0.39
SMN2-215ENST00000628696 ZNF703Q9H7S9 590 aaPredicted RBP17.46■□□□□ 0.39
SMN2-215ENST00000628696 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.46■□□□□ 0.39
SMN2-215ENST00000628696 MS4A12Q9NXJ0 267 aa17.46■□□□□ 0.39
SMN2-215ENST00000628696 NUDT4Q9NZJ9 180 aa17.46■□□□□ 0.39
SMN2-215ENST00000628696 CNIH4Q9P003 139 aa17.46■□□□□ 0.39
SMN2-215ENST00000628696 OPTCQ9UBM4 332 aa17.46■□□□□ 0.39
SMN2-215ENST00000628696 B4GALT7Q9UBV7 327 aa17.46■□□□□ 0.39
SMN2-215ENST00000628696 PHF11Q9UIL8 331 aa17.46■□□□□ 0.39
SMN2-215ENST00000628696 ERVK-19Q9WJR5 959 aa17.46■□□□□ 0.39
SMN2-215ENST00000628696 NF1P21359 2839 aa17.45■□□□□ 0.38
SMN2-215ENST00000628696 NAV3Q8IVL0 2385 aa17.45■□□□□ 0.38
SMN2-215ENST00000628696 HSPB2A8KAH6 182 aa17.45■□□□□ 0.38
SMN2-215ENST00000628696 K7EPI3 171 aa17.45■□□□□ 0.38
SMN2-215ENST00000628696 UBXN8O00124 270 aa17.45■□□□□ 0.38
SMN2-215ENST00000628696 OR10H2O60403 315 aa17.45■□□□□ 0.38
SMN2-215ENST00000628696 SERPINB3P29508 390 aa17.45■□□□□ 0.38
SMN2-215ENST00000628696 SERPINB1P30740 379 aa17.45■□□□□ 0.38
SMN2-215ENST00000628696 PAFAH1B1P43034 410 aa17.45■□□□□ 0.38
SMN2-215ENST00000628696 TNFRSF17Q02223 184 aa17.45■□□□□ 0.38
SMN2-215ENST00000628696 ZNF267Q14586 743 aaPredicted RBP17.45■□□□□ 0.38
SMN2-215ENST00000628696 HSPB2Q16082 182 aa17.45■□□□□ 0.38
SMN2-215ENST00000628696 ULK2Q8IYT8 1036 aa17.45■□□□□ 0.38
SMN2-215ENST00000628696 NINJ1Q92982 152 aa17.45■□□□□ 0.38
SMN2-215ENST00000628696 CENPKQ9BS16 269 aa17.45■□□□□ 0.38
SMN2-215ENST00000628696 DOHHQ9BU89 302 aa17.45■□□□□ 0.38
SMN2-215ENST00000628696 DPH5Q9H2P9 285 aa17.45■□□□□ 0.38
SMN2-215ENST00000628696 CLEC4MQ9H2X3 399 aaPredicted RBP17.45■□□□□ 0.38
SMN2-215ENST00000628696 PROK2Q9HC23 129 aa17.45■□□□□ 0.38
SMN2-215ENST00000628696 ZNF358Q9NW07 568 aa17.45■□□□□ 0.38
SMN2-215ENST00000628696 CRIM1Q9NZV1 1036 aa17.45■□□□□ 0.38
SMN2-215ENST00000628696 ST6GALNAC2Q9UJ37 374 aa17.45■□□□□ 0.38
SMN2-215ENST00000628696 SAR1BQ9Y6B6 198 aa17.45■□□□□ 0.38
SMN2-215ENST00000628696 C15orf38-AP3S2A0A0A6YYH1 394 aa17.44■□□□□ 0.38
SMN2-215ENST00000628696 TCRBV9S1A1TA0A576 114 aa17.44■□□□□ 0.38
SMN2-215ENST00000628696 LRRC3CA6NJW4 275 aa17.44■□□□□ 0.38
SMN2-215ENST00000628696 FBXO45P0C2W1 286 aa17.44■□□□□ 0.38
SMN2-215ENST00000628696 GDF1P27539 372 aa17.44■□□□□ 0.38
SMN2-215ENST00000628696 HNRNPH2P55795 449 aaKnown RBP17.44■□□□□ 0.38
SMN2-215ENST00000628696 GNG11P61952 73 aa17.44■□□□□ 0.38
SMN2-215ENST00000628696 PPP2R2AP63151 447 aa17.44■□□□□ 0.38
SMN2-215ENST00000628696 E2F2Q14209 437 aa17.44■□□□□ 0.38
SMN2-215ENST00000628696 CEBPEQ15744 281 aa17.44■□□□□ 0.38
SMN2-215ENST00000628696 ZKSCAN8Q15776 578 aaPredicted RBP17.44■□□□□ 0.38
SMN2-215ENST00000628696 RNF111Q6ZNA4 994 aa17.44■□□□□ 0.38
SMN2-215ENST00000628696 C3orf62Q6ZUJ4 267 aa17.44■□□□□ 0.38
SMN2-215ENST00000628696 ISCA2Q86U28 154 aa17.44■□□□□ 0.38
SMN2-215ENST00000628696 TGIF2LYQ8IUE0 185 aa17.44■□□□□ 0.38
SMN2-215ENST00000628696 DND1Q8IYX4 353 aaKnown RBP17.44■□□□□ 0.38
SMN2-215ENST00000628696 ST13P4Q8IZP2 240 aaPredicted RBP17.44■□□□□ 0.38
SMN2-215ENST00000628696 LRRC25Q8N386 305 aaPredicted RBP17.44■□□□□ 0.38
SMN2-215ENST00000628696 HUS1BQ8NHY5 278 aa17.44■□□□□ 0.38
SMN2-215ENST00000628696 NEIL3Q8TAT5 605 aa17.44■□□□□ 0.38
SMN2-215ENST00000628696 POM121Q96HA1 1249 aa17.44■□□□□ 0.38
SMN2-215ENST00000628696 MTERF1Q99551 399 aaKnown RBP17.44■□□□□ 0.38
SMN2-215ENST00000628696 WWTR1Q9GZV5 400 aa17.44■□□□□ 0.38
SMN2-215ENST00000628696 NMRAL1Q9HBL8 299 aa17.44■□□□□ 0.38
SMN2-215ENST00000628696 ACKR4Q9NPB9 350 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms