RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 ADAP2Q9NPF8 381 aa6.77□□□□□ -1.33
NPLOC4-221ENST00000625705 MIEF1Q9NQG6 463 aa6.77□□□□□ -1.33
NPLOC4-221ENST00000625705 NECTIN3Q9NQS3 549 aa6.77□□□□□ -1.33
NPLOC4-221ENST00000625705 GIMAP4Q9NUV9 329 aa6.77□□□□□ -1.33
NPLOC4-221ENST00000625705 PSD3Q9NYI0 1048 aa6.77□□□□□ -1.33
NPLOC4-221ENST00000625705 COPS7AQ9UBW8 275 aa6.77□□□□□ -1.33
NPLOC4-221ENST00000625705 PPT2Q9UMR5 302 aa6.77□□□□□ -1.33
NPLOC4-221ENST00000625705 PCDHGA9Q9Y5G4 932 aaKnown RBP6.77□□□□□ -1.33
NPLOC4-221ENST00000625705 AKAP13Q12802 2813 aa6.77□□□□□ -1.33
NPLOC4-221ENST00000625705 UQCRHLA0A096LP55 91 aa6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 TRBV11-1A0A0K0K1C0 115 aa6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 TCRBV16S1A1N1A0A5B0 115 aa6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 SAGE2PA6NJ88 616 aa6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 TMEM114B3SHH9 223 aa6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 CYR61O00622 381 aa6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 UBFD1O14562 309 aaKnown RBP6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 TMPRSS11DO60235 418 aa6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 CTNSO60931 367 aa6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 SEC22BO75396 215 aa6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 PRKRAO75569 313 aaKnown RBP6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 SCELO95171 688 aa6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 AIFM1O95831 613 aa6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 TBX6O95947 436 aaPredicted RBP6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 SERPINA7P05543 415 aa6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 CELA2AP08217 269 aa6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 H2AFB1P0C5Y9 115 aa6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 H2AFB2P0C5Z0 115 aa6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 LINC00032P0C843 101 aa6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 ITGAMP11215 1152 aa6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 CHN1P15882 459 aa6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 BGNP21810 368 aa6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 GRK2P25098 689 aa6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 TIA1P31483 386 aaKnown RBP eCLIP6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 CASRP41180 1078 aa6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 HNRNPFP52597 415 aaKnown RBP6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 FOXA1P55317 472 aa6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 SLC26A5P58743 744 aa6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 ARG2P78540 354 aa6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 FOLH1Q04609 750 aa6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 KLRB1Q12918 225 aa6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 STX3Q13277 289 aa6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 ELAVL1Q15717 326 aaKnown RBP6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 GALNTL6Q49A17 601 aa6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 SOWAHCQ53LP3 525 aaPredicted RBP6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 CRB2Q5IJ48 1285 aa6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 COX20Q5RI15 118 aa6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 NDUFAF5Q5TEU4 345 aa6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 AGBL2Q5U5Z8 902 aa6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 FAM219BQ5XKK7 198 aa6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 C18orf63Q68DL7 685 aa6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 PLAG1Q6DJT9 500 aa6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 JMJD6Q6NYC1 403 aaPredicted RBP6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 ISLR2Q6UXK2 745 aa6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 HPS6Q86YV9 775 aa6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 TREML1Q86YW5 311 aa6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 TRIM42Q8IWZ5 723 aa6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 OR4N5Q8IXE1 308 aa6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 KIRREL3Q8IZU9 778 aa6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 SHISA5Q8N114 240 aa6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 METTL4Q8N3J2 472 aa6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 TMEM132CQ8N3T6 1108 aa6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 SUN3Q8TAQ9 357 aa6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 BRIX1Q8TDN6 353 aaKnown RBP6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 TWIST2Q8WVJ9 160 aa6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 TANKQ92844 425 aa6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 DAZLQ92904 295 aaKnown RBP6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 RBM18Q96H35 190 aaKnown RBP6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 ART5Q96L15 291 aa6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 BBC3Q96PG8 261 aaPredicted RBP6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 PELOQ9BRX2 385 aaKnown RBP6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 CNPPD1Q9BV87 410 aa6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 ALOXE3Q9BYJ1 711 aa6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 SEMA4CQ9C0C4 833 aa6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 OR8D2Q9GZM6 311 aa6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 SLAMF7Q9NQ25 335 aa6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 TEX10Q9NXF1 929 aaPredicted RBP6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 LUZP4Q9P127 313 aa6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 ZNF225Q9UK10 706 aa6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 ADAM29Q9UKF5 820 aa6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 PSME2Q9UL46 239 aa6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 ENTPD4Q9Y227 616 aa6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 ATG4BQ9Y4P1 393 aa6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 PCDHGB7Q9Y5F8 929 aa6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 AHCTF1Q8WYP5 2266 aa6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 IGF2RP11717 2491 aa6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 CACNA1BQ00975 2339 aa6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 SCN2AQ99250 2005 aa6.76□□□□□ -1.33
NPLOC4-221ENST00000625705 ACACBO00763 2458 aa6.75□□□□□ -1.33
NPLOC4-221ENST00000625705 PCSK5Q92824 1860 aa6.75□□□□□ -1.33
NPLOC4-221ENST00000625705 IGKV3D-11A0A0A0MRZ8 115 aa6.75□□□□□ -1.33
NPLOC4-221ENST00000625705 A0A1W2PR48 441 aa6.75□□□□□ -1.33
NPLOC4-221ENST00000625705 C1orf226A1L170 272 aa6.75□□□□□ -1.33
NPLOC4-221ENST00000625705 HMGB1P1B2RPK0 211 aaPredicted RBP6.75□□□□□ -1.33
NPLOC4-221ENST00000625705 C17orf105B2RV13 164 aa6.75□□□□□ -1.33
NPLOC4-221ENST00000625705 TMEM233B4DJY2 109 aa6.75□□□□□ -1.33
NPLOC4-221ENST00000625705 J3QW42 95 aa6.75□□□□□ -1.33
NPLOC4-221ENST00000625705 FCHO1O14526 889 aa6.75□□□□□ -1.33
NPLOC4-221ENST00000625705 PIP5K1BO14986 540 aa6.75□□□□□ -1.33
NPLOC4-221ENST00000625705 PROM1O43490 865 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms