RNA–Protein interactions for RNA: ENST00000625617.2

TUBB3-215, Transcript of tubulin beta 3 class III, humanhuman

TSL 4 BASIC

Gene TUBB3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-215ENST00000625617 OR10G3Q8NGC4 313 aa13.33□□□□□ -0.28
TUBB3-215ENST00000625617 UBTD2Q8WUN7 234 aa13.33□□□□□ -0.28
TUBB3-215ENST00000625617 PPWD1Q96BP3 646 aaKnown RBP13.33□□□□□ -0.28
TUBB3-215ENST00000625617 UBXN10Q96LJ8 280 aa13.33□□□□□ -0.28
TUBB3-215ENST00000625617 JSRP1Q96MG2 331 aaPredicted RBP13.33□□□□□ -0.28
TUBB3-215ENST00000625617 FOXC2Q99958 501 aa13.33□□□□□ -0.28
TUBB3-215ENST00000625617 GPATCH1Q9BRR8 931 aaKnown RBP13.33□□□□□ -0.28
TUBB3-215ENST00000625617 PELOQ9BRX2 385 aaKnown RBP13.33□□□□□ -0.28
TUBB3-215ENST00000625617 SORBS1Q9BX66 1292 aaKnown RBP13.33□□□□□ -0.28
TUBB3-215ENST00000625617 POLDIP3Q9BY77 421 aaKnown RBP13.33□□□□□ -0.28
TUBB3-215ENST00000625617 OR51B5Q9H339 312 aa13.33□□□□□ -0.28
TUBB3-215ENST00000625617 ALG9Q9H6U8 611 aa13.33□□□□□ -0.28
TUBB3-215ENST00000625617 IGSF5Q9NSI5 407 aa13.33□□□□□ -0.28
TUBB3-215ENST00000625617 QPCTLQ9NXS2 382 aa13.33□□□□□ -0.28
TUBB3-215ENST00000625617 CNIH4Q9P003 139 aa13.33□□□□□ -0.28
TUBB3-215ENST00000625617 OPTCQ9UBM4 332 aa13.33□□□□□ -0.28
TUBB3-215ENST00000625617 SNX24Q9Y343 169 aa13.33□□□□□ -0.28
TUBB3-215ENST00000625617 PCDHGB3Q9Y5G1 929 aa13.33□□□□□ -0.28
TUBB3-215ENST00000625617 ZNF407Q9C0G0 2248 aa13.33□□□□□ -0.28
TUBB3-215ENST00000625617 IQANK1A0A1B0GTG1 560 aa13.32□□□□□ -0.28
TUBB3-215ENST00000625617 TCRBV9S1A1TA0A576 114 aa13.32□□□□□ -0.28
TUBB3-215ENST00000625617 HSPB2A8KAH6 182 aa13.32□□□□□ -0.28
TUBB3-215ENST00000625617 K7EPI3 171 aa13.32□□□□□ -0.28
TUBB3-215ENST00000625617 HRKO00198 91 aa13.32□□□□□ -0.28
TUBB3-215ENST00000625617 OR10H2O60403 315 aa13.32□□□□□ -0.28
TUBB3-215ENST00000625617 FBXO45P0C2W1 286 aa13.32□□□□□ -0.28
TUBB3-215ENST00000625617 RFPL3SP0C7P2 107 aa13.32□□□□□ -0.28
TUBB3-215ENST00000625617 ALOX15P16050 662 aaPredicted RBP13.32□□□□□ -0.28
TUBB3-215ENST00000625617 TLX1P31314 330 aaPredicted RBP13.32□□□□□ -0.28
TUBB3-215ENST00000625617 UQCRC1P31930 480 aa13.32□□□□□ -0.28
TUBB3-215ENST00000625617 BUD31P41223 144 aaPredicted RBP13.32□□□□□ -0.28
TUBB3-215ENST00000625617 KIR2DL3P43628 341 aa13.32□□□□□ -0.28
TUBB3-215ENST00000625617 HERVK_113P63132 956 aa13.32□□□□□ -0.28
TUBB3-215ENST00000625617 ERVK-8P63133 956 aa13.32□□□□□ -0.28
TUBB3-215ENST00000625617 BIKQ13323 160 aa13.32□□□□□ -0.28
TUBB3-215ENST00000625617 SLMAPQ14BN4 828 aa13.32□□□□□ -0.28
TUBB3-215ENST00000625617 HSPB2Q16082 182 aa13.32□□□□□ -0.28
TUBB3-215ENST00000625617 SPRED3Q2MJR0 410 aa13.32□□□□□ -0.28
TUBB3-215ENST00000625617 OR4C11Q6IEV9 310 aa13.32□□□□□ -0.28
TUBB3-215ENST00000625617 GRHL2Q6ISB3 625 aa13.32□□□□□ -0.28
TUBB3-215ENST00000625617 RNF111Q6ZNA4 994 aa13.32□□□□□ -0.28
TUBB3-215ENST00000625617 GPR180Q86V85 440 aa13.32□□□□□ -0.28
TUBB3-215ENST00000625617 MYLK4Q86YV6 388 aaPredicted RBP13.32□□□□□ -0.28
TUBB3-215ENST00000625617 ULK2Q8IYT8 1036 aa13.32□□□□□ -0.28
TUBB3-215ENST00000625617 ST13P4Q8IZP2 240 aaPredicted RBP13.32□□□□□ -0.28
TUBB3-215ENST00000625617 ZCCHC7Q8N3Z6 543 aaKnown RBP13.32□□□□□ -0.28
TUBB3-215ENST00000625617 NEIL3Q8TAT5 605 aa13.32□□□□□ -0.28
TUBB3-215ENST00000625617 STAG3L4Q8TBR4 150 aa13.32□□□□□ -0.28
TUBB3-215ENST00000625617 TANKQ92844 425 aa13.32□□□□□ -0.28
TUBB3-215ENST00000625617 RGMAQ96B86 450 aa13.32□□□□□ -0.28
TUBB3-215ENST00000625617 RMND5BQ96G75 393 aaPredicted RBP13.32□□□□□ -0.28
TUBB3-215ENST00000625617 POM121Q96HA1 1249 aa13.32□□□□□ -0.28
TUBB3-215ENST00000625617 ZNF597Q96LX8 424 aa13.32□□□□□ -0.28
TUBB3-215ENST00000625617 DOHHQ9BU89 302 aa13.32□□□□□ -0.28
TUBB3-215ENST00000625617 TMUB1Q9BVT8 246 aa13.32□□□□□ -0.28
TUBB3-215ENST00000625617 ERVK-6Q9BXR3 956 aa13.32□□□□□ -0.28
TUBB3-215ENST00000625617 WWTR1Q9GZV5 400 aa13.32□□□□□ -0.28
TUBB3-215ENST00000625617 CXXC4Q9H2H0 198 aa13.32□□□□□ -0.28
TUBB3-215ENST00000625617 CLEC4MQ9H2X3 399 aaPredicted RBP13.32□□□□□ -0.28
TUBB3-215ENST00000625617 SAYSD1Q9NPB0 183 aa13.32□□□□□ -0.28
TUBB3-215ENST00000625617 ACKR4Q9NPB9 350 aa13.32□□□□□ -0.28
TUBB3-215ENST00000625617 DMRT3Q9NQL9 472 aa13.32□□□□□ -0.28
TUBB3-215ENST00000625617 CCM2LQ9NUG4 571 aaPredicted RBP13.32□□□□□ -0.28
TUBB3-215ENST00000625617 RYDENQ9NUL5 291 aaKnown RBP13.32□□□□□ -0.28
TUBB3-215ENST00000625617 ADGRE2Q9UHX3 823 aa13.32□□□□□ -0.28
TUBB3-215ENST00000625617 ST6GALNAC2Q9UJ37 374 aa13.32□□□□□ -0.28
TUBB3-215ENST00000625617 ERVK-19Q9WJR5 959 aa13.32□□□□□ -0.28
TUBB3-215ENST00000625617 CHCHD2Q9Y6H1 151 aaPredicted RBP13.32□□□□□ -0.28
TUBB3-215ENST00000625617 HCFC1P51610 2035 aa13.31□□□□□ -0.28
TUBB3-215ENST00000625617 FAM221AA4D161 298 aa13.31□□□□□ -0.28
TUBB3-215ENST00000625617 FAM159BA6NKW6 160 aa13.31□□□□□ -0.28
TUBB3-215ENST00000625617 UBXN8O00124 270 aa13.31□□□□□ -0.28
TUBB3-215ENST00000625617 PLPP1O14494 284 aa13.31□□□□□ -0.28
TUBB3-215ENST00000625617 DVL2O14641 736 aa13.31□□□□□ -0.28
TUBB3-215ENST00000625617 EIF3HO15372 352 aaKnown RBP eCLIP13.31□□□□□ -0.28
TUBB3-215ENST00000625617 KERAO60938 352 aa13.31□□□□□ -0.28
TUBB3-215ENST00000625617 PRKRAO75569 313 aaKnown RBP13.31□□□□□ -0.28
TUBB3-215ENST00000625617 LRATO95237 230 aa13.31□□□□□ -0.28
TUBB3-215ENST00000625617 GDF1P27539 372 aa13.31□□□□□ -0.28
TUBB3-215ENST00000625617 SERPINB3P29508 390 aa13.31□□□□□ -0.28
TUBB3-215ENST00000625617 GMPRP36959 345 aa13.31□□□□□ -0.28
TUBB3-215ENST00000625617 PAFAH1B1P43034 410 aa13.31□□□□□ -0.28
TUBB3-215ENST00000625617 TRPC1P48995 793 aa13.31□□□□□ -0.28
TUBB3-215ENST00000625617 ASCL1P50553 236 aa13.31□□□□□ -0.28
TUBB3-215ENST00000625617 HNRNPH2P55795 449 aaKnown RBP13.31□□□□□ -0.28
TUBB3-215ENST00000625617 PPP2R2AP63151 447 aa13.31□□□□□ -0.28
TUBB3-215ENST00000625617 PHEXP78562 749 aa13.31□□□□□ -0.28
TUBB3-215ENST00000625617 CALCOCO2Q13137 446 aa13.31□□□□□ -0.28
TUBB3-215ENST00000625617 CBLBQ13191 982 aa13.31□□□□□ -0.28
TUBB3-215ENST00000625617 SNTB1Q13884 538 aaKnown RBP13.31□□□□□ -0.28
TUBB3-215ENST00000625617 EBPQ15125 230 aaKnown RBP13.31□□□□□ -0.28
TUBB3-215ENST00000625617 CEBPEQ15744 281 aa13.31□□□□□ -0.28
TUBB3-215ENST00000625617 DEPDC1Q5TB30 811 aa13.31□□□□□ -0.28
TUBB3-215ENST00000625617 C18orf63Q68DL7 685 aa13.31□□□□□ -0.28
TUBB3-215ENST00000625617 DGAT2L6Q6ZPD8 337 aa13.31□□□□□ -0.28
TUBB3-215ENST00000625617 RAPH1Q70E73 1250 aa13.31□□□□□ -0.28
TUBB3-215ENST00000625617 TBC1D1Q86TI0 1168 aaPredicted RBP13.31□□□□□ -0.28
TUBB3-215ENST00000625617 CTAGE3PQ8IX95 158 aa13.31□□□□□ -0.28
TUBB3-215ENST00000625617 RNF175Q8N4F7 328 aa13.31□□□□□ -0.28
TUBB3-215ENST00000625617 RELL2Q8NC24 303 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms