RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 TMEM64Q6YI46 380 aa20.23■□□□□ 0.83
SPAST-204ENST00000621856 FKBP9P1Q75LS8 142 aa20.23■□□□□ 0.83
SPAST-204ENST00000621856 SLC30A8Q8IWU4 369 aa20.23■□□□□ 0.83
SPAST-204ENST00000621856 PACRGLQ8N7B6 248 aa20.23■□□□□ 0.83
SPAST-204ENST00000621856 Q8N9G6 341 aaPredicted RBP20.23■□□□□ 0.83
SPAST-204ENST00000621856 OR4K14Q8NGD5 310 aa20.23■□□□□ 0.83
SPAST-204ENST00000621856 SFXN5Q8TD22 340 aa20.23■□□□□ 0.83
SPAST-204ENST00000621856 TPD52L3Q96J77 140 aa20.23■□□□□ 0.83
SPAST-204ENST00000621856 HSH2DQ96JZ2 352 aa20.23■□□□□ 0.83
SPAST-204ENST00000621856 EPB41L1Q9H4G0 881 aa20.23■□□□□ 0.83
SPAST-204ENST00000621856 PDE7BQ9NP56 450 aa20.23■□□□□ 0.83
SPAST-204ENST00000621856 DNAJB9Q9UBS3 223 aa20.23■□□□□ 0.83
SPAST-204ENST00000621856 PLCL2Q9UPR0 1127 aa20.23■□□□□ 0.83
SPAST-204ENST00000621856 H0YJX3 145 aa20.22■□□□□ 0.83
SPAST-204ENST00000621856 SGK494L7N484 410 aa20.22■□□□□ 0.83
SPAST-204ENST00000621856 DUX1O43812 170 aa20.22■□□□□ 0.83
SPAST-204ENST00000621856 CFIP05156 583 aa20.22■□□□□ 0.83
SPAST-204ENST00000621856 PRKAG1P54619 331 aa20.22■□□□□ 0.83
SPAST-204ENST00000621856 EEF1A2Q05639 463 aaKnown RBP20.22■□□□□ 0.83
SPAST-204ENST00000621856 CEBPEQ15744 281 aa20.22■□□□□ 0.83
SPAST-204ENST00000621856 NDUFA9Q16795 377 aa20.22■□□□□ 0.83
SPAST-204ENST00000621856 PRTGQ2VWP7 1150 aa20.22■□□□□ 0.83
SPAST-204ENST00000621856 TMEM107Q6UX40 140 aa20.22■□□□□ 0.83
SPAST-204ENST00000621856 SPRED1Q7Z699 444 aa20.22■□□□□ 0.83
SPAST-204ENST00000621856 GATAD2AQ86YP4 633 aa20.22■□□□□ 0.83
SPAST-204ENST00000621856 ZDHHC21Q8IVQ6 265 aa20.22■□□□□ 0.83
SPAST-204ENST00000621856 SAMD14Q8IZD0 417 aaPredicted RBP20.22■□□□□ 0.83
SPAST-204ENST00000621856 TMEM105Q8N8V8 129 aa20.22■□□□□ 0.83
SPAST-204ENST00000621856 OR5T3Q8NGG3 340 aa20.22■□□□□ 0.83
SPAST-204ENST00000621856 N4BP2L2Q92802 583 aaPredicted RBP20.22■□□□□ 0.83
SPAST-204ENST00000621856 MOAP1Q96BY2 351 aa20.22■□□□□ 0.83
SPAST-204ENST00000621856 ZNF681Q96N22 645 aa20.22■□□□□ 0.83
SPAST-204ENST00000621856 FSCN3Q9NQT6 498 aa20.22■□□□□ 0.83
SPAST-204ENST00000621856 RAB26Q9ULW5 256 aa20.22■□□□□ 0.83
SPAST-204ENST00000621856 CLCA2Q9UQC9 943 aa20.22■□□□□ 0.83
SPAST-204ENST00000621856 A0A1B0GTQ1 180 aa20.22■□□□□ 0.83
SPAST-204ENST00000621856 C5orf58C9J3I9 102 aa20.22■□□□□ 0.83
SPAST-204ENST00000621856 SUV39H1O43463 412 aa20.22■□□□□ 0.83
SPAST-204ENST00000621856 GPR3P46089 330 aa20.22■□□□□ 0.83
SPAST-204ENST00000621856 XKP51811 444 aa20.22■□□□□ 0.83
SPAST-204ENST00000621856 SHC2P98077 582 aa20.22■□□□□ 0.83
SPAST-204ENST00000621856 MED21Q13503 144 aa20.22■□□□□ 0.83
SPAST-204ENST00000621856 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.22■□□□□ 0.83
SPAST-204ENST00000621856 BHLHB9Q6PI77 547 aa20.22■□□□□ 0.83
SPAST-204ENST00000621856 VTCN1Q7Z7D3 282 aa20.22■□□□□ 0.83
SPAST-204ENST00000621856 CA13Q8N1Q1 262 aa20.22■□□□□ 0.83
SPAST-204ENST00000621856 LRRC25Q8N386 305 aaPredicted RBP20.22■□□□□ 0.83
SPAST-204ENST00000621856 DTWD2Q8NBA8 298 aa20.22■□□□□ 0.83
SPAST-204ENST00000621856 OR9A2Q8NGT5 310 aa20.22■□□□□ 0.83
SPAST-204ENST00000621856 TMBIM1Q969X1 311 aa20.22■□□□□ 0.83
SPAST-204ENST00000621856 NPLQ9BXD5 320 aaPredicted RBP20.22■□□□□ 0.83
SPAST-204ENST00000621856 A4GALTQ9NPC4 353 aa20.22■□□□□ 0.83
SPAST-204ENST00000621856 PRDM9Q9NQV7 894 aa20.22■□□□□ 0.83
SPAST-204ENST00000621856 C8orf4Q9NR00 106 aa20.22■□□□□ 0.83
SPAST-204ENST00000621856 NLGN3Q9NZ94 848 aa20.22■□□□□ 0.83
SPAST-204ENST00000621856 TRPC4Q9UBN4 977 aa20.22■□□□□ 0.83
SPAST-204ENST00000621856 AP4B1Q9Y6B7 739 aa20.22■□□□□ 0.83
SPAST-204ENST00000621856 CACNA1EQ15878 2313 aa20.21■□□□□ 0.83
SPAST-204ENST00000621856 PI4KAP42356 2102 aa20.21■□□□□ 0.83
SPAST-204ENST00000621856 RDH16O75452 317 aa20.21■□□□□ 0.83
SPAST-204ENST00000621856 GCM2O75603 506 aaPredicted RBP20.21■□□□□ 0.83
SPAST-204ENST00000621856 ZBTB11O95625 1053 aaPredicted RBP20.21■□□□□ 0.83
SPAST-204ENST00000621856 CCDC80Q76M96 950 aa20.21■□□□□ 0.83
SPAST-204ENST00000621856 SLC44A2Q8IWA5 706 aaPredicted RBP20.21■□□□□ 0.83
SPAST-204ENST00000621856 OR4N5Q8IXE1 308 aa20.21■□□□□ 0.83
SPAST-204ENST00000621856 OR56A1Q8NGH5 318 aa20.21■□□□□ 0.83
SPAST-204ENST00000621856 OR9A4Q8NGU2 314 aa20.21■□□□□ 0.83
SPAST-204ENST00000621856 RAB8BQ92930 207 aa20.21■□□□□ 0.83
SPAST-204ENST00000621856 ZNF597Q96LX8 424 aa20.21■□□□□ 0.83
SPAST-204ENST00000621856 NTN4Q9HB63 628 aa20.21■□□□□ 0.83
SPAST-204ENST00000621856 C3orf14Q9HBI5 128 aa20.21■□□□□ 0.83
SPAST-204ENST00000621856 DNAAF2Q9NVR5 837 aaKnown RBP20.21■□□□□ 0.83
SPAST-204ENST00000621856 PCDH15Q96QU1 1955 aa20.21■□□□□ 0.83
SPAST-204ENST00000621856 SCN2AQ99250 2005 aa20.2■□□□□ 0.82
SPAST-204ENST00000621856 ACOX3O15254 700 aa20.2■□□□□ 0.82
SPAST-204ENST00000621856 EMC8O43402 210 aa20.2■□□□□ 0.82
SPAST-204ENST00000621856 B4GAT1O43505 415 aa20.2■□□□□ 0.82
SPAST-204ENST00000621856 PRSS23O95084 383 aa20.2■□□□□ 0.82
SPAST-204ENST00000621856 RASAL1O95294 804 aa20.2■□□□□ 0.82
SPAST-204ENST00000621856 IFNA14P01570 189 aa20.2■□□□□ 0.82
SPAST-204ENST00000621856 OPN1SWP03999 348 aa20.2■□□□□ 0.82
SPAST-204ENST00000621856 BCHEP06276 602 aa20.2■□□□□ 0.82
SPAST-204ENST00000621856 FHP07954 510 aa20.2■□□□□ 0.82
SPAST-204ENST00000621856 MATN1P21941 496 aa20.2■□□□□ 0.82
SPAST-204ENST00000621856 ARL4DP49703 201 aa20.2■□□□□ 0.82
SPAST-204ENST00000621856 KHKP50053 298 aa20.2■□□□□ 0.82
SPAST-204ENST00000621856 ANXA11P50995 505 aaKnown RBP20.2■□□□□ 0.82
SPAST-204ENST00000621856 PRR5P85299 388 aa20.2■□□□□ 0.82
SPAST-204ENST00000621856 GPR19Q15760 415 aa20.2■□□□□ 0.82
SPAST-204ENST00000621856 HLA-BQ31612 363 aa20.2■□□□□ 0.82
SPAST-204ENST00000621856 C6orf52Q5T4I8 152 aa20.2■□□□□ 0.82
SPAST-204ENST00000621856 REEP3Q6NUK4 255 aa20.2■□□□□ 0.82
SPAST-204ENST00000621856 PLXDC1Q8IUK5 500 aa20.2■□□□□ 0.82
SPAST-204ENST00000621856 TTC29Q8NA56 475 aaPredicted RBP20.2■□□□□ 0.82
SPAST-204ENST00000621856 DUSP23Q9BVJ7 150 aa20.2■□□□□ 0.82
SPAST-204ENST00000621856 OR51I1Q9H343 314 aa20.2■□□□□ 0.82
SPAST-204ENST00000621856 FBXO4Q9UKT5 387 aa20.2■□□□□ 0.82
SPAST-204ENST00000621856 BAG5Q9UL15 447 aa20.2■□□□□ 0.82
SPAST-204ENST00000621856 C7orf72A4D263 438 aa20.19■□□□□ 0.82
SPAST-204ENST00000621856 TMEM247A6NEH6 219 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms