RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 COPS5Q92905 334 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 LMF1Q96S06 567 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 DDOQ99489 341 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 MAP3K4Q9Y6R4 1608 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 FKTNO75072 461 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 HPGDP15428 266 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 EPHA5P54756 1037 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 HADHBP55084 474 aaKnown RBP4.83□□□□□ -1.64
VPS13D-214ENST00000620676 TMIGD1Q6UXZ0 262 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 ZNF566Q969W8 418 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 KLRG1Q96E93 195 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 B3GNT2Q9NY97 397 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 MARCH4Q9P2E8 410 aaPredicted RBP4.83□□□□□ -1.64
VPS13D-214ENST00000620676 ACSL6Q9UKU0 697 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 CEP152O94986 1710 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 IRGMA1A4Y4 181 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 LOC730098B7Z3J9 87 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 PRRG1O14668 218 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 CHST10O43529 356 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 OR13C7P0DN81 318 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 ANXA7P20073 488 aaKnown RBP4.83□□□□□ -1.64
VPS13D-214ENST00000620676 RPS19P39019 145 aaKnown RBP4.83□□□□□ -1.64
VPS13D-214ENST00000620676 TMC8Q8IU68 726 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 REM2Q8IYK8 340 aaPredicted RBP4.83□□□□□ -1.64
VPS13D-214ENST00000620676 NLGN4XQ8N0W4 816 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 AVL9Q8NBF6 648 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 THOC3Q96J01 351 aaKnown RBP4.83□□□□□ -1.64
VPS13D-214ENST00000620676 NAALAD2Q9Y3Q0 740 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 FZD9O00144 591 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 CACNG3O60359 315 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 RHOCP08134 193 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 TMEM81Q6P7N7 255 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 NDUFAF7Q7L592 441 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 MFSD4AQ8N468 514 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 DMAC2Q9NW81 257 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 MAGEB4O15481 346 aaPredicted RBP4.83□□□□□ -1.64
VPS13D-214ENST00000620676 KRT33AO76009 404 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 EPOP01588 193 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 DCNP07585 359 aaKnown RBP4.83□□□□□ -1.64
VPS13D-214ENST00000620676 MMP12P39900 470 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 HSD17B7P56937 341 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 TSTD2Q5T7W7 516 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 TMPRSS11BQ86T26 416 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 C1orf52Q8N6N3 182 aaKnown RBP4.83□□□□□ -1.64
VPS13D-214ENST00000620676 WDR20Q8TBZ3 569 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 ELP3Q9H9T3 547 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 ATRNL1Q5VV63 1379 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.83□□□□□ -1.64
VPS13D-214ENST00000620676 CDH11P55287 796 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 RPS14P62263 151 aaKnown RBP4.83□□□□□ -1.64
VPS13D-214ENST00000620676 MEF2AQ02078 507 aaPredicted RBP4.83□□□□□ -1.64
VPS13D-214ENST00000620676 MVKQ03426 396 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 ARMC12Q5T9G4 340 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 PLAG1Q6DJT9 500 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 OR10K2Q6IF99 312 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 LRRC69Q6ZNQ3 347 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 OR13C4Q8NGS5 318 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 TM9SF4Q92544 642 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 PPP1R16AQ96I34 528 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 FKBPLQ9UIM3 349 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 UTS2RQ9UKP6 389 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 E9PCH4 1651 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 MCCD1P59942 119 aaPredicted RBP4.83□□□□□ -1.64
VPS13D-214ENST00000620676 EIF2B1Q14232 305 aaKnown RBP4.83□□□□□ -1.64
VPS13D-214ENST00000620676 BAK1Q16611 211 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 SFRP5Q5T4F7 317 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 IER5LQ5T953 404 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 TCEAL6Q6IPX3 200 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 ZNF529Q6P280 563 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 OR51L1Q8NGJ5 315 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 DNAJB3Q8WWF6 145 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 CEMIPQ8WUJ3 1361 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 ZNF7P17097 686 aaPredicted RBP4.83□□□□□ -1.64
VPS13D-214ENST00000620676 PPP4CP60510 307 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 UBE2MP61081 183 aaKnown RBP4.83□□□□□ -1.64
VPS13D-214ENST00000620676 TMEM69Q5SWH9 247 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 LILRB1Q8NHL6 650 aaPredicted RBP4.83□□□□□ -1.64
VPS13D-214ENST00000620676 DVL3Q92997 716 aaPredicted RBP4.83□□□□□ -1.64
VPS13D-214ENST00000620676 INTS12Q96CB8 462 aaKnown RBP4.83□□□□□ -1.64
VPS13D-214ENST00000620676 GLS2Q9UI32 602 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 DLSTP36957 453 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 DCTP40126 519 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 THPOP40225 353 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 MAPK9P45984 424 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 ATXN7L2Q5T6C5 722 aaPredicted RBP4.83□□□□□ -1.64
VPS13D-214ENST00000620676 C3orf33Q6P1S2 294 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 ZBTB2Q8N680 514 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 IL17RCQ8NAC3 791 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 OR5D16Q8NGK9 328 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 RAET1EQ8TD07 263 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 PRMT7Q9NVM4 692 aaPredicted RBP4.83□□□□□ -1.64
VPS13D-214ENST00000620676 MARCH2Q9P0N8 246 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 PLAGL1Q9UM63 463 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 CORO2BQ9UQ03 480 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 FAM96BQ9Y3D0 163 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 CNTRLQ7Z7A1 2325 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 MED19A0JLT2 244 aaPredicted RBP4.83□□□□□ -1.64
VPS13D-214ENST00000620676 ANKRD61A6NGH8 418 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 SHOXO15266 292 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 C14orf28Q4W4Y0 310 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms