RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 EML6Q6ZMW3 1958 aa12.77□□□□□ -0.37
NEK3-210ENST00000620675 IGSF10Q6WRI0 2623 aa12.76□□□□□ -0.37
NEK3-210ENST00000620675 SEC24DO94855 1032 aaPredicted RBP12.76□□□□□ -0.37
NEK3-210ENST00000620675 LAMP1P11279 417 aa12.76□□□□□ -0.37
NEK3-210ENST00000620675 PRPS2P11908 318 aa12.76□□□□□ -0.37
NEK3-210ENST00000620675 ACPPP15309 386 aa12.76□□□□□ -0.37
NEK3-210ENST00000620675 MAPK1P28482 360 aa12.76□□□□□ -0.37
NEK3-210ENST00000620675 ZFP36L2P47974 494 aaKnown RBP12.76□□□□□ -0.37
NEK3-210ENST00000620675 XKP51811 444 aa12.76□□□□□ -0.37
NEK3-210ENST00000620675 ARFIP2P53365 341 aa12.76□□□□□ -0.37
NEK3-210ENST00000620675 PHC1P78364 1004 aa12.76□□□□□ -0.37
NEK3-210ENST00000620675 IGLV3-21P80748 117 aaPredicted RBP12.76□□□□□ -0.37
NEK3-210ENST00000620675 STX4Q12846 297 aa12.76□□□□□ -0.37
NEK3-210ENST00000620675 HEPACAMQ14CZ8 416 aa12.76□□□□□ -0.37
NEK3-210ENST00000620675 PCOLCEQ15113 449 aa12.76□□□□□ -0.37
NEK3-210ENST00000620675 LTB4RQ15722 352 aa12.76□□□□□ -0.37
NEK3-210ENST00000620675 SMU1Q2TAY7 513 aa12.76□□□□□ -0.37
NEK3-210ENST00000620675 CPZQ66K79 652 aa12.76□□□□□ -0.37
NEK3-210ENST00000620675 CCDC81Q6ZN84 652 aa12.76□□□□□ -0.37
NEK3-210ENST00000620675 HOMEZQ8IX15 550 aa12.76□□□□□ -0.37
NEK3-210ENST00000620675 ZNF321PQ8N8H1 164 aa12.76□□□□□ -0.37
NEK3-210ENST00000620675 ADCY4Q8NFM4 1077 aa12.76□□□□□ -0.37
NEK3-210ENST00000620675 RILPQ96NA2 401 aa12.76□□□□□ -0.37
NEK3-210ENST00000620675 FAIM2Q9BWQ8 316 aa12.76□□□□□ -0.37
NEK3-210ENST00000620675 BRINP2Q9C0B6 783 aa12.76□□□□□ -0.37
NEK3-210ENST00000620675 REEP4Q9H6H4 257 aa12.76□□□□□ -0.37
NEK3-210ENST00000620675 WDR41Q9HAD4 459 aa12.76□□□□□ -0.37
NEK3-210ENST00000620675 KLHL14Q9P2G3 628 aa12.76□□□□□ -0.37
NEK3-210ENST00000620675 COPG1Q9Y678 874 aaKnown RBP12.76□□□□□ -0.37
NEK3-210ENST00000620675 SRRM3A6NNA2 597 aaPredicted RBP12.76□□□□□ -0.37
NEK3-210ENST00000620675 SCAMP2O15127 329 aaKnown RBP12.76□□□□□ -0.37
NEK3-210ENST00000620675 SHOX2O60902 331 aaPredicted RBP12.76□□□□□ -0.37
NEK3-210ENST00000620675 NME6O75414 186 aaPredicted RBP12.76□□□□□ -0.37
NEK3-210ENST00000620675 DRD2P14416 443 aa12.76□□□□□ -0.37
NEK3-210ENST00000620675 CLDN8P56748 225 aa12.76□□□□□ -0.37
NEK3-210ENST00000620675 Q0VFX4 171 aa12.76□□□□□ -0.37
NEK3-210ENST00000620675 CDC20Q12834 499 aa12.76□□□□□ -0.37
NEK3-210ENST00000620675 MAD2L1Q13257 205 aaPredicted RBP12.76□□□□□ -0.37
NEK3-210ENST00000620675 PDE7AQ13946 482 aa12.76□□□□□ -0.37
NEK3-210ENST00000620675 PAOXQ6QHF9 649 aa12.76□□□□□ -0.37
NEK3-210ENST00000620675 SPATA19Q7Z5L4 167 aa12.76□□□□□ -0.37
NEK3-210ENST00000620675 CPEB2Q7Z5Q1 589 aaKnown RBP12.76□□□□□ -0.37
NEK3-210ENST00000620675 CCDC116Q8IYX3 515 aa12.76□□□□□ -0.37
NEK3-210ENST00000620675 OR4K14Q8NGD5 310 aa12.76□□□□□ -0.37
NEK3-210ENST00000620675 SUN3Q8TAQ9 357 aa12.76□□□□□ -0.37
NEK3-210ENST00000620675 CCDC28BQ9BUN5 200 aa12.76□□□□□ -0.37
NEK3-210ENST00000620675 ANKRA2Q9H9E1 313 aa12.76□□□□□ -0.37
NEK3-210ENST00000620675 MIEF1Q9NQG6 463 aa12.76□□□□□ -0.37
NEK3-210ENST00000620675 SH3BP4Q9P0V3 963 aa12.76□□□□□ -0.37
NEK3-210ENST00000620675 FBXL4Q9UKA2 621 aa12.76□□□□□ -0.37
NEK3-210ENST00000620675 LOC102723996A0A087X1L8 192 aa12.75□□□□□ -0.37
NEK3-210ENST00000620675 IGHV1-45A0A0A0MS14 117 aa12.75□□□□□ -0.37
NEK3-210ENST00000620675 ZNF891A8MT65 544 aaPredicted RBP12.75□□□□□ -0.37
NEK3-210ENST00000620675 GUCY1B2O75343 617 aa12.75□□□□□ -0.37
NEK3-210ENST00000620675 IFNA16P05015 189 aa12.75□□□□□ -0.37
NEK3-210ENST00000620675 CD63P08962 238 aa12.75□□□□□ -0.37
NEK3-210ENST00000620675 CT62P0C5K7 136 aa12.75□□□□□ -0.37
NEK3-210ENST00000620675 CPMP14384 443 aa12.75□□□□□ -0.37
NEK3-210ENST00000620675 PIK3R1P27986 724 aa12.75□□□□□ -0.37
NEK3-210ENST00000620675 OR4D2P58180 307 aa12.75□□□□□ -0.37
NEK3-210ENST00000620675 ACTN3Q08043 901 aaPredicted RBP12.75□□□□□ -0.37
NEK3-210ENST00000620675 LRRC69Q6ZNQ3 347 aa12.75□□□□□ -0.37
NEK3-210ENST00000620675 IKBIPQ70UQ0 350 aa12.75□□□□□ -0.37
NEK3-210ENST00000620675 PTPMT1Q8WUK0 201 aaPredicted RBP12.75□□□□□ -0.37
NEK3-210ENST00000620675 METTL21AQ8WXB1 218 aa12.75□□□□□ -0.37
NEK3-210ENST00000620675 EFHD1Q9BUP0 239 aa12.75□□□□□ -0.37
NEK3-210ENST00000620675 SLC35C2Q9NQQ7 365 aa12.75□□□□□ -0.37
NEK3-210ENST00000620675 ERVK-11Q9UQG0 969 aa12.75□□□□□ -0.37
NEK3-210ENST00000620675 SNX3O60493 162 aa12.74□□□□□ -0.37
NEK3-210ENST00000620675 NCF2P19878 526 aaPredicted RBP12.74□□□□□ -0.37
NEK3-210ENST00000620675 GPX3P22352 226 aa12.74□□□□□ -0.37
NEK3-210ENST00000620675 ASMTP46597 345 aa12.74□□□□□ -0.37
NEK3-210ENST00000620675 DGKQP52824 942 aa12.74□□□□□ -0.37
NEK3-210ENST00000620675 DEFB109BQ30KR1 87 aa12.74□□□□□ -0.37
NEK3-210ENST00000620675 SPANXN4Q5MJ08 99 aa12.74□□□□□ -0.37
NEK3-210ENST00000620675 PAPD4Q6PIY7 484 aaKnown RBP12.74□□□□□ -0.37
NEK3-210ENST00000620675 FAM111BQ6SJ93 734 aa12.74□□□□□ -0.37
NEK3-210ENST00000620675 SPATA21Q7Z572 469 aa12.74□□□□□ -0.37
NEK3-210ENST00000620675 CPLX4Q7Z7G2 160 aa12.74□□□□□ -0.37
NEK3-210ENST00000620675 DPY30Q9C005 99 aa12.74□□□□□ -0.37
NEK3-210ENST00000620675 ZNF385DQ9H6B1 395 aa12.74□□□□□ -0.37
NEK3-210ENST00000620675 ZNF160Q9HCG1 818 aa12.74□□□□□ -0.37
NEK3-210ENST00000620675 SDR39U1Q9NRG7 319 aaPredicted RBP12.74□□□□□ -0.37
NEK3-210ENST00000620675 ATP6V1HQ9UI12 483 aa12.74□□□□□ -0.37
NEK3-210ENST00000620675 KALRNO60229 2985 aa12.74□□□□□ -0.37
NEK3-210ENST00000620675 CPAMD8Q8IZJ3 1885 aa12.74□□□□□ -0.37
NEK3-210ENST00000620675 KMT2BQ9UMN6 2715 aaPredicted RBP12.74□□□□□ -0.37
NEK3-210ENST00000620675 TMEM8BA6NDV4 472 aa12.74□□□□□ -0.37
NEK3-210ENST00000620675 ARGFXA6NJG6 315 aa12.74□□□□□ -0.37
NEK3-210ENST00000620675 K7ENP7 123 aa12.74□□□□□ -0.37
NEK3-210ENST00000620675 DNAJB5O75953 348 aa12.74□□□□□ -0.37
NEK3-210ENST00000620675 COX7A2P14406 83 aa12.74□□□□□ -0.37
NEK3-210ENST00000620675 WNT3P56703 355 aa12.74□□□□□ -0.37
NEK3-210ENST00000620675 MRPS35P82673 323 aaKnown RBP12.74□□□□□ -0.37
NEK3-210ENST00000620675 FOXK2Q01167 660 aa12.74□□□□□ -0.37
NEK3-210ENST00000620675 UBAP2LQ14157 1087 aaKnown RBP12.74□□□□□ -0.37
NEK3-210ENST00000620675 PGS1Q32NB8 556 aa12.74□□□□□ -0.37
NEK3-210ENST00000620675 OR4F3Q6IEY1 312 aa12.74□□□□□ -0.37
NEK3-210ENST00000620675 INO80CQ6PI98 192 aaPredicted RBP12.74□□□□□ -0.37
NEK3-210ENST00000620675 ZNF551Q7Z340 670 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms