RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 ZNF750Q32MQ0 723 aa11.02□□□□□ -0.65
UPF3B-204ENST00000619445 TBCELQ5QJ74 424 aa11.02□□□□□ -0.65
UPF3B-204ENST00000619445 CYP20A1Q6UW02 462 aa11.02□□□□□ -0.65
UPF3B-204ENST00000619445 TRILQ7L0X0 811 aa11.02□□□□□ -0.65
UPF3B-204ENST00000619445 CMC1Q7Z7K0 106 aa11.02□□□□□ -0.65
UPF3B-204ENST00000619445 CDH24Q86UP0 819 aa11.02□□□□□ -0.65
UPF3B-204ENST00000619445 MYLK4Q86YV6 388 aaPredicted RBP11.02□□□□□ -0.65
UPF3B-204ENST00000619445 TAGAPQ8N103 731 aa11.02□□□□□ -0.65
UPF3B-204ENST00000619445 TMEM251Q8N6I4 163 aa11.02□□□□□ -0.65
UPF3B-204ENST00000619445 TEX9Q8N6V9 391 aa11.02□□□□□ -0.65
UPF3B-204ENST00000619445 FBF1Q8TES7 1133 aa11.02□□□□□ -0.65
UPF3B-204ENST00000619445 SPACA9Q96E40 222 aaPredicted RBP11.02□□□□□ -0.65
UPF3B-204ENST00000619445 OR51B5Q9H339 312 aa11.02□□□□□ -0.65
UPF3B-204ENST00000619445 LDAHQ9H6V9 325 aa11.02□□□□□ -0.65
UPF3B-204ENST00000619445 DMRT3Q9NQL9 472 aa11.02□□□□□ -0.65
UPF3B-204ENST00000619445 IGSF5Q9NSI5 407 aa11.02□□□□□ -0.65
UPF3B-204ENST00000619445 ACAD8Q9UKU7 415 aa11.02□□□□□ -0.65
UPF3B-204ENST00000619445 MTORP42345 2549 aa11.01□□□□□ -0.65
UPF3B-204ENST00000619445 FOXE1O00358 373 aaPredicted RBP11.01□□□□□ -0.65
UPF3B-204ENST00000619445 PLPP1O14494 284 aa11.01□□□□□ -0.65
UPF3B-204ENST00000619445 TP53I11O14683 189 aa11.01□□□□□ -0.65
UPF3B-204ENST00000619445 SEMA3DO95025 777 aa11.01□□□□□ -0.65
UPF3B-204ENST00000619445 KLHL2O95198 593 aa11.01□□□□□ -0.65
UPF3B-204ENST00000619445 ETHE1O95571 254 aa11.01□□□□□ -0.65
UPF3B-204ENST00000619445 NR2F6P10588 404 aa11.01□□□□□ -0.65
UPF3B-204ENST00000619445 MSX1P28360 303 aa11.01□□□□□ -0.65
UPF3B-204ENST00000619445 MAGEA5P43359 124 aa11.01□□□□□ -0.65
UPF3B-204ENST00000619445 TMED10P49755 219 aaKnown RBP11.01□□□□□ -0.65
UPF3B-204ENST00000619445 SERPINB8P50452 374 aa11.01□□□□□ -0.65
UPF3B-204ENST00000619445 KCNJ2P63252 427 aa11.01□□□□□ -0.65
UPF3B-204ENST00000619445 RPP38P78345 283 aaKnown RBP11.01□□□□□ -0.65
UPF3B-204ENST00000619445 FOLH1Q04609 750 aa11.01□□□□□ -0.65
UPF3B-204ENST00000619445 CKAP4Q07065 602 aaKnown RBP11.01□□□□□ -0.65
UPF3B-204ENST00000619445 DDX39BQ13838 428 aaKnown RBP11.01□□□□□ -0.65
UPF3B-204ENST00000619445 PCBP2Q15366 365 aaKnown RBP eCLIP11.01□□□□□ -0.65
UPF3B-204ENST00000619445 SF3B4Q15427 424 aaKnown RBP eCLIP11.01□□□□□ -0.65
UPF3B-204ENST00000619445 PFKFB4Q16877 469 aa11.01□□□□□ -0.65
UPF3B-204ENST00000619445 ZNF791Q3KP31 576 aaPredicted RBP11.01□□□□□ -0.65
UPF3B-204ENST00000619445 SLC25A35Q3KQZ1 300 aa11.01□□□□□ -0.65
UPF3B-204ENST00000619445 EMC4Q5J8M3 183 aa11.01□□□□□ -0.65
UPF3B-204ENST00000619445 CES4AQ5XG92 561 aa11.01□□□□□ -0.65
UPF3B-204ENST00000619445 RNF111Q6ZNA4 994 aa11.01□□□□□ -0.65
UPF3B-204ENST00000619445 C16orf47Q6ZP98 133 aaPredicted RBP11.01□□□□□ -0.65
UPF3B-204ENST00000619445 NCCRP1Q6ZVX7 275 aaPredicted RBP11.01□□□□□ -0.65
UPF3B-204ENST00000619445 NUDT13Q86X67 352 aa11.01□□□□□ -0.65
UPF3B-204ENST00000619445 FBXW8Q8N3Y1 598 aa11.01□□□□□ -0.65
UPF3B-204ENST00000619445 MARVELD2Q8N4S9 558 aa11.01□□□□□ -0.65
UPF3B-204ENST00000619445 PAQR8Q8TEZ7 354 aa11.01□□□□□ -0.65
UPF3B-204ENST00000619445 NXNL1Q96CM4 212 aa11.01□□□□□ -0.65
UPF3B-204ENST00000619445 LRRC46Q96FV0 321 aa11.01□□□□□ -0.65
UPF3B-204ENST00000619445 MTERF1Q99551 399 aaKnown RBP11.01□□□□□ -0.65
UPF3B-204ENST00000619445 EXO5Q9H790 373 aa11.01□□□□□ -0.65
UPF3B-204ENST00000619445 DDX31Q9H8H2 851 aaKnown RBP11.01□□□□□ -0.65
UPF3B-204ENST00000619445 LIN28AQ9H9Z2 209 aaKnown RBP11.01□□□□□ -0.65
UPF3B-204ENST00000619445 ZFP64Q9NPA5 681 aa11.01□□□□□ -0.65
UPF3B-204ENST00000619445 AHSPQ9NZD4 102 aa11.01□□□□□ -0.65
UPF3B-204ENST00000619445 ATG4BQ9Y4P1 393 aa11.01□□□□□ -0.65
UPF3B-204ENST00000619445 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.01□□□□□ -0.65
UPF3B-204ENST00000619445 CELSR1Q9NYQ6 3014 aa11.01□□□□□ -0.65
UPF3B-204ENST00000619445 MED13LQ71F56 2210 aa11□□□□□ -0.65
UPF3B-204ENST00000619445 NINQ8N4C6 2090 aa11□□□□□ -0.65
UPF3B-204ENST00000619445 SETD2Q9BYW2 2564 aaPredicted RBP11□□□□□ -0.65
UPF3B-204ENST00000619445 TRGV5A0A0B4J1U4 118 aa11□□□□□ -0.65
UPF3B-204ENST00000619445 PINLYPA6NC86 204 aa11□□□□□ -0.65
UPF3B-204ENST00000619445 ANKRD33BA6NCL7 494 aa11□□□□□ -0.65
UPF3B-204ENST00000619445 ZNHIT1O43257 154 aa11□□□□□ -0.65
UPF3B-204ENST00000619445 PROM1O43490 865 aa11□□□□□ -0.65
UPF3B-204ENST00000619445 KLK8O60259 260 aa11□□□□□ -0.65
UPF3B-204ENST00000619445 CDH16O75309 829 aa11□□□□□ -0.65
UPF3B-204ENST00000619445 GUCY1B2O75343 617 aa11□□□□□ -0.65
UPF3B-204ENST00000619445 TOXO94900 526 aa11□□□□□ -0.65
UPF3B-204ENST00000619445 C2P06681 752 aa11□□□□□ -0.65
UPF3B-204ENST00000619445 FBXO45P0C2W1 286 aa11□□□□□ -0.65
UPF3B-204ENST00000619445 SLC35E2P0CK97 266 aa11□□□□□ -0.65
UPF3B-204ENST00000619445 MTHFD2P13995 350 aa11□□□□□ -0.65
UPF3B-204ENST00000619445 TYK2P29597 1187 aa11□□□□□ -0.65
UPF3B-204ENST00000619445 ZFP36L2P47974 494 aaKnown RBP11□□□□□ -0.65
UPF3B-204ENST00000619445 NUP107P57740 925 aa11□□□□□ -0.65
UPF3B-204ENST00000619445 ETF1P62495 437 aaKnown RBP11□□□□□ -0.65
UPF3B-204ENST00000619445 ID2Q02363 134 aa11□□□□□ -0.65
UPF3B-204ENST00000619445 GUCY2DQ02846 1103 aa11□□□□□ -0.65
UPF3B-204ENST00000619445 TFF3Q07654 80 aa11□□□□□ -0.65
UPF3B-204ENST00000619445 C2orf54Q08AI8 447 aa11□□□□□ -0.65
UPF3B-204ENST00000619445 FOXO1Q12778 655 aa11□□□□□ -0.65
UPF3B-204ENST00000619445 DLG1Q12959 904 aa11□□□□□ -0.65
UPF3B-204ENST00000619445 C6orf163Q5TEZ5 329 aa11□□□□□ -0.65
UPF3B-204ENST00000619445 OR52E8Q6IFG1 317 aa11□□□□□ -0.65
UPF3B-204ENST00000619445 ZNF585AQ6P3V2 769 aa11□□□□□ -0.65
UPF3B-204ENST00000619445 SPNS3Q6ZMD2 512 aa11□□□□□ -0.65
UPF3B-204ENST00000619445 TAOK1Q7L7X3 1001 aa11□□□□□ -0.65
UPF3B-204ENST00000619445 PAGE2Q7Z2X7 111 aa11□□□□□ -0.65
UPF3B-204ENST00000619445 ZNF572Q7Z3I7 529 aaPredicted RBP11□□□□□ -0.65
UPF3B-204ENST00000619445 C9orf40Q8IXQ3 194 aa11□□□□□ -0.65
UPF3B-204ENST00000619445 DMRTC2Q8IXT2 367 aaPredicted RBP11□□□□□ -0.65
UPF3B-204ENST00000619445 CENPLQ8N0S6 344 aaPredicted RBP11□□□□□ -0.65
UPF3B-204ENST00000619445 ZNF321PQ8N8H1 164 aa11□□□□□ -0.65
UPF3B-204ENST00000619445 L3MBTL4Q8NA19 623 aa11□□□□□ -0.65
UPF3B-204ENST00000619445 OR10Q1Q8NGQ4 319 aa11□□□□□ -0.65
UPF3B-204ENST00000619445 RIT1Q92963 219 aa11□□□□□ -0.65
UPF3B-204ENST00000619445 TP53INP1Q96A56 240 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms