RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 R3HDM2Q9Y2K5 976 aaKnown RBP4.16□□□□□ -1.74
SNCA-213ENST00000618500 TMEM89A2RUT3 159 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 EEF1E1-BLOC1S5C9J1V9 151 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 C16orf97H3BN30 126 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 GOLGA8TH3BQL2 631 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 EEF1E1O43324 174 aaKnown RBP4.16□□□□□ -1.74
SNCA-213ENST00000618500 B3GALT2O43825 422 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 B4GALT2O60909 372 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 HNF1AP20823 631 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 GDF1P27539 372 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 KCNC1P48547 511 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 LHX2P50458 406 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 ATP5J2P56134 94 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 TGM3Q08188 693 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 IQCB1Q15051 598 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 OASLQ15646 514 aaKnown RBP4.16□□□□□ -1.74
SNCA-213ENST00000618500 NFKBIBQ15653 356 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 DEFB134Q4QY38 66 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 MSS51Q4VC12 460 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 UGT2A3Q6UWM9 527 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 PPP1R21Q6ZMI0 780 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 UBE2R2Q712K3 238 aaPredicted RBP4.16□□□□□ -1.74
SNCA-213ENST00000618500 ADCK2Q7Z695 626 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 C9orf40Q8IXQ3 194 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 NKAPQ8N5F7 415 aaKnown RBP4.16□□□□□ -1.74
SNCA-213ENST00000618500 LRRC17Q8N6Y2 441 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 G6PC3Q9BUM1 346 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 ACAT2Q9BWD1 397 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 CAPS2Q9BXY5 557 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 SLCO5A1Q9H2Y9 848 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 SNX15Q9NRS6 342 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 GLRX2Q9NS18 164 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 ABCF3Q9NUQ8 709 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 DMGDHQ9UI17 866 aaKnown RBP4.16□□□□□ -1.74
SNCA-213ENST00000618500 CAMK2AQ9UQM7 478 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 ZKSCAN5Q9Y2L8 839 aa4.16□□□□□ -1.74
SNCA-213ENST00000618500 C15orf38-AP3S2A0A0A6YYH1 394 aa4.15□□□□□ -1.74
SNCA-213ENST00000618500 VWC2LB2RUY7 222 aa4.15□□□□□ -1.74
SNCA-213ENST00000618500 KDM4EB2RXH2 506 aaPredicted RBP4.15□□□□□ -1.74
SNCA-213ENST00000618500 C4orf51C9J302 202 aa4.15□□□□□ -1.74
SNCA-213ENST00000618500 RNF223E7ERA6 249 aa4.15□□□□□ -1.74
SNCA-213ENST00000618500 NDUFS8O00217 210 aa4.15□□□□□ -1.74
SNCA-213ENST00000618500 DYRK3O43781 588 aa4.15□□□□□ -1.74
SNCA-213ENST00000618500 NIPSNAP2O75323 286 aa4.15□□□□□ -1.74
SNCA-213ENST00000618500 THBDP07204 575 aa4.15□□□□□ -1.74
SNCA-213ENST00000618500 FCGR2AP12318 317 aa4.15□□□□□ -1.74
SNCA-213ENST00000618500 TBXA2RP21731 343 aa4.15□□□□□ -1.74
SNCA-213ENST00000618500 COILP38432 576 aaPredicted RBP4.15□□□□□ -1.74
SNCA-213ENST00000618500 CSE1LP55060 971 aaKnown RBP4.15□□□□□ -1.74
SNCA-213ENST00000618500 LIM2P55344 173 aa4.15□□□□□ -1.74
SNCA-213ENST00000618500 RWDD2BP57060 319 aa4.15□□□□□ -1.74
SNCA-213ENST00000618500 BMPR2Q13873 1038 aa4.15□□□□□ -1.74
SNCA-213ENST00000618500 RUNX2Q13950 521 aa4.15□□□□□ -1.74
SNCA-213ENST00000618500 MORF4L2Q15014 288 aa4.15□□□□□ -1.74
SNCA-213ENST00000618500 ZNF750Q32MQ0 723 aa4.15□□□□□ -1.74
SNCA-213ENST00000618500 TMEM35AQ53FP2 167 aa4.15□□□□□ -1.74
SNCA-213ENST00000618500 TOR1AIP1Q5JTV8 583 aa4.15□□□□□ -1.74
SNCA-213ENST00000618500 NXPE4Q6UWF7 544 aa4.15□□□□□ -1.74
SNCA-213ENST00000618500 ENPP6Q6UWR7 440 aa4.15□□□□□ -1.74
SNCA-213ENST00000618500 CYP4X1Q8N118 509 aa4.15□□□□□ -1.74
SNCA-213ENST00000618500 SEMA6DQ8NFY4 1073 aa4.15□□□□□ -1.74
SNCA-213ENST00000618500 OR2L5Q8NG80 312 aa4.15□□□□□ -1.74
SNCA-213ENST00000618500 OR7G1Q8NGA0 311 aa4.15□□□□□ -1.74
SNCA-213ENST00000618500 OR6K3Q8NGY3 331 aa4.15□□□□□ -1.74
SNCA-213ENST00000618500 HGDQ93099 445 aa4.15□□□□□ -1.74
SNCA-213ENST00000618500 MS4A6EQ96DS6 147 aa4.15□□□□□ -1.74
SNCA-213ENST00000618500 WWTR1Q9GZV5 400 aa4.15□□□□□ -1.74
SNCA-213ENST00000618500 EPB41L4BQ9H329 900 aa4.15□□□□□ -1.74
SNCA-213ENST00000618500 LMBRD1Q9NUN5 540 aa4.15□□□□□ -1.74
SNCA-213ENST00000618500 PAK5Q9P286 719 aa4.15□□□□□ -1.74
SNCA-213ENST00000618500 DAPP1Q9UN19 280 aa4.15□□□□□ -1.74
SNCA-213ENST00000618500 PDE10AQ9Y233 779 aa4.15□□□□□ -1.74
SNCA-213ENST00000618500 GPR52Q9Y2T5 361 aa4.15□□□□□ -1.74
SNCA-213ENST00000618500 RP1L1Q8IWN7 2480 aaPredicted RBP4.15□□□□□ -1.74
SNCA-213ENST00000618500 INTS1Q8N201 2190 aaKnown RBP4.15□□□□□ -1.74
SNCA-213ENST00000618500 CCDC168Q8NDH2 2452 aa4.15□□□□□ -1.75
SNCA-213ENST00000618500 SPG11Q96JI7 2443 aa4.15□□□□□ -1.75
SNCA-213ENST00000618500 SEC16AO15027 2179 aa4.15□□□□□ -1.75
SNCA-213ENST00000618500 MAGEB16A2A368 324 aa4.15□□□□□ -1.75
SNCA-213ENST00000618500 FAM157AC9JC47 383 aa4.15□□□□□ -1.75
SNCA-213ENST00000618500 H0Y3Z8 333 aa4.15□□□□□ -1.75
SNCA-213ENST00000618500 TO15178 435 aa4.15□□□□□ -1.75
SNCA-213ENST00000618500 ZNF354AO60765 605 aaPredicted RBP4.15□□□□□ -1.75
SNCA-213ENST00000618500 SS18L1O75177 396 aaPredicted RBP4.15□□□□□ -1.75
SNCA-213ENST00000618500 IGHV4-31P0DP07 118 aa4.15□□□□□ -1.75
SNCA-213ENST00000618500 COX7A2P14406 83 aa4.15□□□□□ -1.75
SNCA-213ENST00000618500 POU2F1P14859 743 aa4.15□□□□□ -1.75
SNCA-213ENST00000618500 CFPP27918 469 aa4.15□□□□□ -1.75
SNCA-213ENST00000618500 SRD5A2P31213 254 aa4.15□□□□□ -1.75
SNCA-213ENST00000618500 CPA2P48052 419 aa4.15□□□□□ -1.75
SNCA-213ENST00000618500 CLDN18P56856 261 aa4.15□□□□□ -1.75
SNCA-213ENST00000618500 KCNJ2P63252 427 aa4.15□□□□□ -1.75
SNCA-213ENST00000618500 SNTB1Q13884 538 aaKnown RBP4.15□□□□□ -1.75
SNCA-213ENST00000618500 TMEM249Q2WGJ8 235 aa4.15□□□□□ -1.75
SNCA-213ENST00000618500 ZNF672Q499Z4 452 aaPredicted RBP4.15□□□□□ -1.75
SNCA-213ENST00000618500 LIPNQ5VXI9 398 aa4.15□□□□□ -1.75
SNCA-213ENST00000618500 NUP54Q7Z3B4 507 aa4.15□□□□□ -1.75
SNCA-213ENST00000618500 TDRPQ86YL5 185 aa4.15□□□□□ -1.75
SNCA-213ENST00000618500 ANKRD53Q8N9V6 530 aa4.15□□□□□ -1.75
SNCA-213ENST00000618500 SRFBP1Q8NEF9 429 aaKnown RBP4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms