RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 CKAP5Q14008 2032 aa11.5□□□□□ -0.57
SRRT-216ENST00000618262 SPAG17Q6Q759 2223 aa11.5□□□□□ -0.57
SRRT-216ENST00000618262 CABIN1Q9Y6J0 2220 aa11.5□□□□□ -0.57
SRRT-216ENST00000618262 GPR89AB7ZAQ6 455 aa11.5□□□□□ -0.57
SRRT-216ENST00000618262 B9A039 149 aa11.5□□□□□ -0.57
SRRT-216ENST00000618262 FOXE1O00358 373 aaPredicted RBP11.5□□□□□ -0.57
SRRT-216ENST00000618262 NOBOXO60393 691 aa11.5□□□□□ -0.57
SRRT-216ENST00000618262 GPR89BP0CG08 455 aa11.5□□□□□ -0.57
SRRT-216ENST00000618262 ZNF8P17098 575 aaPredicted RBP11.5□□□□□ -0.57
SRRT-216ENST00000618262 WDR4P57081 412 aaKnown RBP11.5□□□□□ -0.57
SRRT-216ENST00000618262 CDKL1Q00532 357 aa11.5□□□□□ -0.57
SRRT-216ENST00000618262 ELP6Q0PNE2 266 aa11.5□□□□□ -0.57
SRRT-216ENST00000618262 ETFDHQ16134 617 aa11.5□□□□□ -0.57
SRRT-216ENST00000618262 RALGPS1Q5JS13 557 aa11.5□□□□□ -0.57
SRRT-216ENST00000618262 TPRG1LQ5T0D9 272 aa11.5□□□□□ -0.57
SRRT-216ENST00000618262 SLC30A6Q6NXT4 461 aa11.5□□□□□ -0.57
SRRT-216ENST00000618262 LINC00299Q6ZSB3 139 aa11.5□□□□□ -0.57
SRRT-216ENST00000618262 C16orf62Q7Z3J2 963 aa11.5□□□□□ -0.57
SRRT-216ENST00000618262 C1orf210Q8IVY1 113 aa11.5□□□□□ -0.57
SRRT-216ENST00000618262 OR10J5Q8NHC4 309 aa11.5□□□□□ -0.57
SRRT-216ENST00000618262 RIT1Q92963 219 aa11.5□□□□□ -0.57
SRRT-216ENST00000618262 SERAC1Q96JX3 654 aa11.5□□□□□ -0.57
SRRT-216ENST00000618262 DPYSL5Q9BPU6 564 aa11.5□□□□□ -0.57
SRRT-216ENST00000618262 HDAC8Q9BY41 377 aa11.5□□□□□ -0.57
SRRT-216ENST00000618262 UCK2Q9BZX2 261 aa11.5□□□□□ -0.57
SRRT-216ENST00000618262 ESRP2Q9H6T0 727 aaKnown RBP11.5□□□□□ -0.57
SRRT-216ENST00000618262 ITM2CQ9NQX7 267 aa11.5□□□□□ -0.57
SRRT-216ENST00000618262 ACSL5Q9ULC5 683 aa11.5□□□□□ -0.57
SRRT-216ENST00000618262 AUP1Q9Y679 476 aa11.5□□□□□ -0.57
SRRT-216ENST00000618262 OAS3Q9Y6K5 1087 aaKnown RBP11.5□□□□□ -0.57
SRRT-216ENST00000618262 R4GN57 208 aa11.5□□□□□ -0.57
SRRT-216ENST00000618262 IGHV1OR15-9A0A0B4J2B8 117 aa11.5□□□□□ -0.57
SRRT-216ENST00000618262 MFSD2BA6NFX1 497 aa11.5□□□□□ -0.57
SRRT-216ENST00000618262 ZNF729A6NN14 1252 aaPredicted RBP11.5□□□□□ -0.57
SRRT-216ENST00000618262 AKAP8O43823 692 aaKnown RBP11.5□□□□□ -0.57
SRRT-216ENST00000618262 PCDHGA12O60330 932 aa11.5□□□□□ -0.57
SRRT-216ENST00000618262 MITFO75030 526 aaPredicted RBP11.5□□□□□ -0.57
SRRT-216ENST00000618262 NDUFS3O75489 264 aa11.5□□□□□ -0.57
SRRT-216ENST00000618262 DIRAS3O95661 229 aa11.5□□□□□ -0.57
SRRT-216ENST00000618262 PAMP19021 973 aa11.5□□□□□ -0.57
SRRT-216ENST00000618262 TMBIM6P55061 237 aa11.5□□□□□ -0.57
SRRT-216ENST00000618262 ZNF284Q2VY69 593 aa11.5□□□□□ -0.57
SRRT-216ENST00000618262 SPANXN3Q5MJ09 141 aa11.5□□□□□ -0.57
SRRT-216ENST00000618262 PDZK1Q5T2W1 519 aa11.5□□□□□ -0.57
SRRT-216ENST00000618262 TMEM164Q5U3C3 297 aa11.5□□□□□ -0.57
SRRT-216ENST00000618262 KLHDC8BQ8IXV7 354 aa11.5□□□□□ -0.57
SRRT-216ENST00000618262 SKA2Q8WVK7 121 aaPredicted RBP11.5□□□□□ -0.57
SRRT-216ENST00000618262 CLDN23Q96B33 292 aa11.5□□□□□ -0.57
SRRT-216ENST00000618262 C5orf34Q96MH7 638 aa11.5□□□□□ -0.57
SRRT-216ENST00000618262 CCNL2Q96S94 520 aaPredicted RBP11.5□□□□□ -0.57
SRRT-216ENST00000618262 WDR77Q9BQA1 342 aaPredicted RBP11.5□□□□□ -0.57
SRRT-216ENST00000618262 DUSP26Q9BV47 211 aa11.5□□□□□ -0.57
SRRT-216ENST00000618262 NAA50Q9GZZ1 169 aaKnown RBP11.5□□□□□ -0.57
SRRT-216ENST00000618262 TOR3AQ9H497 397 aa11.5□□□□□ -0.57
SRRT-216ENST00000618262 NIT2Q9NQR4 276 aa11.5□□□□□ -0.57
SRRT-216ENST00000618262 IMPAD1Q9NX62 359 aa11.5□□□□□ -0.57
SRRT-216ENST00000618262 PSMD13Q9UNM6 376 aa11.5□□□□□ -0.57
SRRT-216ENST00000618262 PLEKHM1Q9Y4G2 1056 aa11.5□□□□□ -0.57
SRRT-216ENST00000618262 PCDHGB6Q9Y5F9 930 aa11.5□□□□□ -0.57
SRRT-216ENST00000618262 PCDHGB2Q9Y5G2 931 aa11.5□□□□□ -0.57
SRRT-216ENST00000618262 PCDHGA7Q9Y5G6 932 aa11.5□□□□□ -0.57
SRRT-216ENST00000618262 PCDHGA6Q9Y5G7 932 aa11.5□□□□□ -0.57
SRRT-216ENST00000618262 PCDHGA5Q9Y5G8 931 aa11.5□□□□□ -0.57
SRRT-216ENST00000618262 A0A0G2JND7 137 aa11.49□□□□□ -0.57
SRRT-216ENST00000618262 TEX13CA0A0J9YWL9 993 aa11.49□□□□□ -0.57
SRRT-216ENST00000618262 LRRC14BA6NHZ5 514 aa11.49□□□□□ -0.57
SRRT-216ENST00000618262 PROM1O43490 865 aa11.49□□□□□ -0.57
SRRT-216ENST00000618262 HCRTR2O43614 444 aa11.49□□□□□ -0.57
SRRT-216ENST00000618262 PLRG1O43660 514 aaKnown RBP11.49□□□□□ -0.57
SRRT-216ENST00000618262 IPO13O94829 963 aaKnown RBP11.49□□□□□ -0.57
SRRT-216ENST00000618262 IGHV2-70P01814 119 aa11.49□□□□□ -0.57
SRRT-216ENST00000618262 OPN1LWP04000 364 aa11.49□□□□□ -0.57
SRRT-216ENST00000618262 SNRNP70P08621 437 aaKnown RBP11.49□□□□□ -0.57
SRRT-216ENST00000618262 CD6P30203 668 aa11.49□□□□□ -0.57
SRRT-216ENST00000618262 GRIA3P42263 894 aa11.49□□□□□ -0.57
SRRT-216ENST00000618262 GLRBP48167 497 aa11.49□□□□□ -0.57
SRRT-216ENST00000618262 TRA2BP62995 288 aaKnown RBP11.49□□□□□ -0.57
SRRT-216ENST00000618262 RAB39AQ14964 217 aa11.49□□□□□ -0.57
SRRT-216ENST00000618262 SLC36A4Q6YBV0 504 aa11.49□□□□□ -0.57
SRRT-216ENST00000618262 CILP2Q8IUL8 1156 aa11.49□□□□□ -0.57
SRRT-216ENST00000618262 MAML2Q8IZL2 1156 aaPredicted RBP11.49□□□□□ -0.57
SRRT-216ENST00000618262 PIWIL2Q8TC59 973 aaKnown RBP11.49□□□□□ -0.57
SRRT-216ENST00000618262 RSC1A1Q92681 617 aa11.49□□□□□ -0.57
SRRT-216ENST00000618262 ELMO2Q96JJ3 720 aa11.49□□□□□ -0.57
SRRT-216ENST00000618262 NPLQ9BXD5 320 aaPredicted RBP11.49□□□□□ -0.57
SRRT-216ENST00000618262 GSDMCQ9BYG8 508 aa11.49□□□□□ -0.57
SRRT-216ENST00000618262 SEMA6AQ9H2E6 1030 aa11.49□□□□□ -0.57
SRRT-216ENST00000618262 ZNF358Q9NW07 568 aa11.49□□□□□ -0.57
SRRT-216ENST00000618262 MIOXQ9UGB7 285 aa11.49□□□□□ -0.57
SRRT-216ENST00000618262 RPH3ALQ9UNE2 315 aa11.49□□□□□ -0.57
SRRT-216ENST00000618262 NPFFR2Q9Y5X5 522 aa11.49□□□□□ -0.57
SRRT-216ENST00000618262 ACTL7BQ9Y614 415 aa11.49□□□□□ -0.57
SRRT-216ENST00000618262 GOLGA4Q13439 2230 aaKnown RBP11.49□□□□□ -0.57
SRRT-216ENST00000618262 PTPRZ1P23471 2315 aaPredicted RBP11.49□□□□□ -0.57
SRRT-216ENST00000618262 SERTM2A0A1B0GWG4 89 aa11.49□□□□□ -0.57
SRRT-216ENST00000618262 TMEM202A6NGA9 273 aa11.49□□□□□ -0.57
SRRT-216ENST00000618262 B4E171 279 aa11.49□□□□□ -0.57
SRRT-216ENST00000618262 FRS3O43559 492 aa11.49□□□□□ -0.57
SRRT-216ENST00000618262 FHP07954 510 aa11.49□□□□□ -0.57
SRRT-216ENST00000618262 PF4V1P10720 104 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms