RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 HMGN4O00479 90 aa11.2□□□□□ -0.62
C11orf54-215ENST00000617482 ADAP00813 363 aa11.2□□□□□ -0.62
C11orf54-215ENST00000617482 SCG5P05408 212 aa11.2□□□□□ -0.62
C11orf54-215ENST00000617482 C6P13671 934 aa11.2□□□□□ -0.62
C11orf54-215ENST00000617482 PTPN2P17706 415 aa11.2□□□□□ -0.62
C11orf54-215ENST00000617482 CSTF2P33240 577 aaKnown RBP eCLIP11.2□□□□□ -0.622e-8■■■■□ 23.8
C11orf54-215ENST00000617482 CASP3P42574 277 aa11.2□□□□□ -0.62
C11orf54-215ENST00000617482 XKP51811 444 aa11.2□□□□□ -0.62
C11orf54-215ENST00000617482 CNTN1Q12860 1018 aa11.2□□□□□ -0.62
C11orf54-215ENST00000617482 ILKQ13418 452 aa11.2□□□□□ -0.62
C11orf54-215ENST00000617482 PIN1Q13526 163 aaPredicted RBP11.2□□□□□ -0.62
C11orf54-215ENST00000617482 DHCR24Q15392 516 aa11.2□□□□□ -0.62
C11orf54-215ENST00000617482 SPHARQ15513 63 aa11.2□□□□□ -0.62
C11orf54-215ENST00000617482 KHDRBS2Q5VWX1 349 aaKnown RBP11.2□□□□□ -0.62
C11orf54-215ENST00000617482 CASP12Q6UXS9 341 aa11.2□□□□□ -0.62
C11orf54-215ENST00000617482 GPR65Q8IYL9 337 aa11.2□□□□□ -0.62
C11orf54-215ENST00000617482 ST13P5Q8NFI4 369 aaPredicted RBP11.2□□□□□ -0.62
C11orf54-215ENST00000617482 SETD7Q8WTS6 366 aaKnown RBP11.2□□□□□ -0.62
C11orf54-215ENST00000617482 OTUB1Q96FW1 271 aaPredicted RBP11.2□□□□□ -0.62
C11orf54-215ENST00000617482 TRMT61AQ96FX7 289 aaKnown RBP11.2□□□□□ -0.62
C11orf54-215ENST00000617482 LRRC3BQ96PB8 259 aa11.2□□□□□ -0.62
C11orf54-215ENST00000617482 ZNF717Q9BY31 904 aaPredicted RBP11.2□□□□□ -0.62
C11orf54-215ENST00000617482 POLR2J3Q9H1A7 115 aaKnown RBP11.2□□□□□ -0.62
C11orf54-215ENST00000617482 PAK6Q9NQU5 681 aaPredicted RBP11.2□□□□□ -0.62
C11orf54-215ENST00000617482 SEMA3GQ9NS98 782 aa11.2□□□□□ -0.62
C11orf54-215ENST00000617482 SNTG1Q9NSN8 517 aa11.2□□□□□ -0.62
C11orf54-215ENST00000617482 FBXL12Q9NXK8 326 aa11.2□□□□□ -0.62
C11orf54-215ENST00000617482 TVP23BQ9NYZ1 205 aa11.2□□□□□ -0.62
C11orf54-215ENST00000617482 AHSPQ9NZD4 102 aa11.2□□□□□ -0.62
C11orf54-215ENST00000617482 LINC00854A0A1B0GVQ3 168 aa11.19□□□□□ -0.62
C11orf54-215ENST00000617482 WASHC1A8K0Z3 465 aa11.19□□□□□ -0.62
C11orf54-215ENST00000617482 H7BY64 318 aa11.19□□□□□ -0.62
C11orf54-215ENST00000617482 PDPK1O15530 556 aa11.19□□□□□ -0.62
C11orf54-215ENST00000617482 CSO75390 466 aaKnown RBP11.19□□□□□ -0.62
C11orf54-215ENST00000617482 PAPLNO95428 1278 aa11.19□□□□□ -0.62
C11orf54-215ENST00000617482 APOA1P02647 267 aa11.19□□□□□ -0.62
C11orf54-215ENST00000617482 H1F0P07305 194 aaKnown RBP11.19□□□□□ -0.62
C11orf54-215ENST00000617482 CHRM5P08912 532 aaPredicted RBP11.19□□□□□ -0.62
C11orf54-215ENST00000617482 PSMB5P28074 263 aa11.19□□□□□ -0.62
C11orf54-215ENST00000617482 DEFA1P59665 94 aa11.19□□□□□ -0.62
C11orf54-215ENST00000617482 DEFA3P59666 94 aa11.19□□□□□ -0.62
C11orf54-215ENST00000617482 LSM11P83369 360 aaKnown RBP eCLIP11.19□□□□□ -0.62
C11orf54-215ENST00000617482 MXD1Q05195 221 aa11.19□□□□□ -0.62
C11orf54-215ENST00000617482 SF3B4Q15427 424 aaKnown RBP eCLIP11.19□□□□□ -0.623e-6■■■□□ 15.4
C11orf54-215ENST00000617482 SYPL1Q16563 259 aa11.19□□□□□ -0.62
C11orf54-215ENST00000617482 ZNF362Q5T0B9 420 aaPredicted RBP11.19□□□□□ -0.62
C11orf54-215ENST00000617482 WASH2PQ6VEQ5 465 aa11.19□□□□□ -0.62
C11orf54-215ENST00000617482 SLC30A8Q8IWU4 369 aa11.19□□□□□ -0.62
C11orf54-215ENST00000617482 OR5D16Q8NGK9 328 aa11.19□□□□□ -0.62
C11orf54-215ENST00000617482 OR2L2Q8NH16 312 aa11.19□□□□□ -0.62
C11orf54-215ENST00000617482 SLC7A13Q8TCU3 470 aa11.19□□□□□ -0.62
C11orf54-215ENST00000617482 OR5P2Q8WZ92 322 aa11.19□□□□□ -0.62
C11orf54-215ENST00000617482 TFGQ92734 400 aaPredicted RBP11.19□□□□□ -0.62
C11orf54-215ENST00000617482 NXPE3Q969Y0 559 aa11.19□□□□□ -0.62
C11orf54-215ENST00000617482 ARRDC3Q96B67 414 aa11.19□□□□□ -0.62
C11orf54-215ENST00000617482 TMEM80Q96HE8 168 aa11.19□□□□□ -0.62
C11orf54-215ENST00000617482 PRAP1Q96NZ9 151 aa11.19□□□□□ -0.62
C11orf54-215ENST00000617482 MVB12BQ9H7P6 319 aa11.19□□□□□ -0.62
C11orf54-215ENST00000617482 A4GALTQ9NPC4 353 aa11.19□□□□□ -0.62
C11orf54-215ENST00000617482 RABL2AQ9UBK7 228 aaPredicted RBP11.19□□□□□ -0.62
C11orf54-215ENST00000617482 SEC14L3Q9UDX4 400 aa11.19□□□□□ -0.62
C11orf54-215ENST00000617482 CHD7Q9P2D1 2997 aa11.19□□□□□ -0.62
C11orf54-215ENST00000617482 TLX2O43763 284 aaPredicted RBP11.19□□□□□ -0.62
C11orf54-215ENST00000617482 DYRK3O43781 588 aa11.19□□□□□ -0.62
C11orf54-215ENST00000617482 SLC28A2O43868 658 aa11.19□□□□□ -0.62
C11orf54-215ENST00000617482 FKTNO75072 461 aa11.19□□□□□ -0.62
C11orf54-215ENST00000617482 PTGER1P34995 402 aa11.19□□□□□ -0.62
C11orf54-215ENST00000617482 BSGP35613 385 aa11.19□□□□□ -0.62
C11orf54-215ENST00000617482 SNRPGP62308 76 aaKnown RBP11.19□□□□□ -0.62
C11orf54-215ENST00000617482 ZMAT1Q5H9K5 638 aa11.19□□□□□ -0.62
C11orf54-215ENST00000617482 TOR1AIP1Q5JTV8 583 aa11.19□□□□□ -0.62
C11orf54-215ENST00000617482 C17orf64Q86WR6 236 aa11.19□□□□□ -0.62
C11orf54-215ENST00000617482 PLA2G15Q8NCC3 412 aa11.19□□□□□ -0.62
C11orf54-215ENST00000617482 IL17RDQ8NFM7 739 aa11.19□□□□□ -0.62
C11orf54-215ENST00000617482 XAGE5Q8WWM1 108 aa11.19□□□□□ -0.62
C11orf54-215ENST00000617482 PIK3R3Q92569 461 aa11.19□□□□□ -0.62
C11orf54-215ENST00000617482 RAD51AP1Q96B01 352 aa11.19□□□□□ -0.62
C11orf54-215ENST00000617482 EFHD2Q96C19 240 aaPredicted RBP11.19□□□□□ -0.62
C11orf54-215ENST00000617482 SLC6A18Q96N87 628 aa11.19□□□□□ -0.62
C11orf54-215ENST00000617482 POLR2J2Q9GZM3 115 aaKnown RBP11.19□□□□□ -0.62
C11orf54-215ENST00000617482 RSPH9Q9H1X1 276 aaPredicted RBP11.19□□□□□ -0.62
C11orf54-215ENST00000617482 OR52A5Q9H2C5 316 aa11.19□□□□□ -0.62
C11orf54-215ENST00000617482 DPEP2Q9H4A9 486 aa11.19□□□□□ -0.62
C11orf54-215ENST00000617482 SMURF1Q9HCE7 757 aa11.19□□□□□ -0.62
C11orf54-215ENST00000617482 FZD3Q9NPG1 666 aa11.19□□□□□ -0.62
C11orf54-215ENST00000617482 TM7SF3Q9NS93 570 aa11.19□□□□□ -0.62
C11orf54-215ENST00000617482 SLC23A2Q9UGH3 650 aa11.19□□□□□ -0.62
C11orf54-215ENST00000617482 MGAT4BQ9UQ53 548 aa11.19□□□□□ -0.62
C11orf54-215ENST00000617482 LSM2Q9Y333 95 aaKnown RBP11.19□□□□□ -0.62
C11orf54-215ENST00000617482 M0R3H8 397 aa11.18□□□□□ -0.62
C11orf54-215ENST00000617482 SERPIND1P05546 499 aa11.18□□□□□ -0.62
C11orf54-215ENST00000617482 HBQ1P09105 142 aa11.18□□□□□ -0.62
C11orf54-215ENST00000617482 CISD3P0C7P0 127 aa11.18□□□□□ -0.62
C11orf54-215ENST00000617482 OR12D1P0DN82 309 aa11.18□□□□□ -0.62
C11orf54-215ENST00000617482 PIPP12273 146 aaPredicted RBP11.18□□□□□ -0.62
C11orf54-215ENST00000617482 PSMA1P25786 263 aaKnown RBP11.18□□□□□ -0.62
C11orf54-215ENST00000617482 ETV6P41212 452 aa11.18□□□□□ -0.62
C11orf54-215ENST00000617482 CRYBB2P43320 205 aa11.18□□□□□ -0.62
C11orf54-215ENST00000617482 RHAGQ02094 409 aa11.18□□□□□ -0.62
C11orf54-215ENST00000617482 ZNF91Q05481 1191 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms