RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 GPR180Q86V85 440 aa19.16■□□□□ 0.66
TRAPPC3-208ENST00000616074 TEX9Q8N6V9 391 aa19.16■□□□□ 0.66
TRAPPC3-208ENST00000616074 SPATA4Q8NEY3 305 aa19.16■□□□□ 0.66
TRAPPC3-208ENST00000616074 SLC22A8Q8TCC7 542 aa19.16■□□□□ 0.66
TRAPPC3-208ENST00000616074 RGMAQ96B86 450 aa19.16■□□□□ 0.66
TRAPPC3-208ENST00000616074 NXNL1Q96CM4 212 aa19.16■□□□□ 0.66
TRAPPC3-208ENST00000616074 RBM18Q96H35 190 aaKnown RBP19.16■□□□□ 0.66
TRAPPC3-208ENST00000616074 ZNF559Q9BR84 538 aa19.16■□□□□ 0.66
TRAPPC3-208ENST00000616074 DMRT3Q9NQL9 472 aa19.16■□□□□ 0.66
TRAPPC3-208ENST00000616074 MS4A12Q9NXJ0 267 aa19.16■□□□□ 0.66
TRAPPC3-208ENST00000616074 KCNN3Q9UGI6 736 aa19.16■□□□□ 0.66
TRAPPC3-208ENST00000616074 ADGRE2Q9UHX3 823 aa19.16■□□□□ 0.66
TRAPPC3-208ENST00000616074 ACAD8Q9UKU7 415 aa19.16■□□□□ 0.66
TRAPPC3-208ENST00000616074 PYCARDQ9ULZ3 195 aa19.16■□□□□ 0.66
TRAPPC3-208ENST00000616074 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.16■□□□□ 0.66
TRAPPC3-208ENST00000616074 SETD2Q9BYW2 2564 aaPredicted RBP19.15■□□□□ 0.66
TRAPPC3-208ENST00000616074 A0A0G2JNJ9 132 aa19.15■□□□□ 0.66
TRAPPC3-208ENST00000616074 DYRK3O43781 588 aa19.15■□□□□ 0.66
TRAPPC3-208ENST00000616074 ALOX15P16050 662 aaPredicted RBP19.15■□□□□ 0.66
TRAPPC3-208ENST00000616074 CRABP2P29373 138 aa19.15■□□□□ 0.66
TRAPPC3-208ENST00000616074 ADH7P40394 386 aa19.15■□□□□ 0.66
TRAPPC3-208ENST00000616074 ZFP36L2P47974 494 aaKnown RBP19.15■□□□□ 0.66
TRAPPC3-208ENST00000616074 PRAMEF20Q5VT98 475 aa19.15■□□□□ 0.66
TRAPPC3-208ENST00000616074 SLC22A10Q63ZE4 541 aa19.15■□□□□ 0.66
TRAPPC3-208ENST00000616074 TMEM200AQ86VY9 491 aa19.15■□□□□ 0.66
TRAPPC3-208ENST00000616074 CCDC25Q86WR0 208 aa19.15■□□□□ 0.66
TRAPPC3-208ENST00000616074 MYLK4Q86YV6 388 aaPredicted RBP19.15■□□□□ 0.66
TRAPPC3-208ENST00000616074 ZCCHC7Q8N3Z6 543 aaKnown RBP19.15■□□□□ 0.66
TRAPPC3-208ENST00000616074 FBF1Q8TES7 1133 aa19.15■□□□□ 0.66
TRAPPC3-208ENST00000616074 PAQR8Q8TEZ7 354 aa19.15■□□□□ 0.66
TRAPPC3-208ENST00000616074 TANKQ92844 425 aa19.15■□□□□ 0.66
TRAPPC3-208ENST00000616074 SARAFQ96BY9 339 aa19.15■□□□□ 0.66
TRAPPC3-208ENST00000616074 SPACA9Q96E40 222 aaPredicted RBP19.15■□□□□ 0.66
TRAPPC3-208ENST00000616074 FBXL20Q96IG2 436 aa19.15■□□□□ 0.66
TRAPPC3-208ENST00000616074 ART5Q96L15 291 aa19.15■□□□□ 0.66
TRAPPC3-208ENST00000616074 MTERF1Q99551 399 aaKnown RBP19.15■□□□□ 0.66
TRAPPC3-208ENST00000616074 CNPPD1Q9BV87 410 aa19.15■□□□□ 0.66
TRAPPC3-208ENST00000616074 ZNF703Q9H7S9 590 aaPredicted RBP19.15■□□□□ 0.66
TRAPPC3-208ENST00000616074 SPRR3Q9UBC9 169 aa19.15■□□□□ 0.66
TRAPPC3-208ENST00000616074 Q9UFV3 132 aa19.15■□□□□ 0.66
TRAPPC3-208ENST00000616074 PHF11Q9UIL8 331 aa19.15■□□□□ 0.66
TRAPPC3-208ENST00000616074 NINQ8N4C6 2090 aa19.14■□□□□ 0.65
TRAPPC3-208ENST00000616074 TRGV5A0A0B4J1U4 118 aa19.14■□□□□ 0.65
TRAPPC3-208ENST00000616074 HCN1O60741 890 aa19.14■□□□□ 0.65
TRAPPC3-208ENST00000616074 WDR1O75083 606 aa19.14■□□□□ 0.65
TRAPPC3-208ENST00000616074 RFPL3SP0C7P2 107 aa19.14■□□□□ 0.65
TRAPPC3-208ENST00000616074 PIK3CBP42338 1070 aa19.14■□□□□ 0.65
TRAPPC3-208ENST00000616074 PLTPP55058 493 aa19.14■□□□□ 0.65
TRAPPC3-208ENST00000616074 RPS13P62277 151 aaKnown RBP19.14■□□□□ 0.65
TRAPPC3-208ENST00000616074 HERVK_113P63132 956 aa19.14■□□□□ 0.65
TRAPPC3-208ENST00000616074 ERVK-8P63133 956 aa19.14■□□□□ 0.65
TRAPPC3-208ENST00000616074 IRF9Q00978 393 aa19.14■□□□□ 0.65
TRAPPC3-208ENST00000616074 BIKQ13323 160 aa19.14■□□□□ 0.65
TRAPPC3-208ENST00000616074 C1orf185Q5T7R7 199 aa19.14■□□□□ 0.65
TRAPPC3-208ENST00000616074 WLSQ5T9L3 541 aa19.14■□□□□ 0.65
TRAPPC3-208ENST00000616074 LIX1LQ8IVB5 337 aa19.14■□□□□ 0.65
TRAPPC3-208ENST00000616074 ST13P4Q8IZP2 240 aaPredicted RBP19.14■□□□□ 0.65
TRAPPC3-208ENST00000616074 CENPLQ8N0S6 344 aaPredicted RBP19.14■□□□□ 0.65
TRAPPC3-208ENST00000616074 SLC15A4Q8N697 577 aa19.14■□□□□ 0.65
TRAPPC3-208ENST00000616074 FBXO25Q8TCJ0 367 aa19.14■□□□□ 0.65
TRAPPC3-208ENST00000616074 KCTD4Q8WVF5 259 aa19.14■□□□□ 0.65
TRAPPC3-208ENST00000616074 GAL3ST4Q96RP7 486 aa19.14■□□□□ 0.65
TRAPPC3-208ENST00000616074 CENPKQ9BS16 269 aa19.14■□□□□ 0.65
TRAPPC3-208ENST00000616074 ERVK-6Q9BXR3 956 aa19.14■□□□□ 0.65
TRAPPC3-208ENST00000616074 ZNF717Q9BY31 904 aaPredicted RBP19.14■□□□□ 0.65
TRAPPC3-208ENST00000616074 EXO5Q9H790 373 aa19.14■□□□□ 0.65
TRAPPC3-208ENST00000616074 PROK2Q9HC23 129 aa19.14■□□□□ 0.65
TRAPPC3-208ENST00000616074 ERVK-19Q9WJR5 959 aa19.14■□□□□ 0.65
TRAPPC3-208ENST00000616074 LRRC3CA6NJW4 275 aa19.13■□□□□ 0.65
TRAPPC3-208ENST00000616074 WASHC1A8K0Z3 465 aa19.13■□□□□ 0.65
TRAPPC3-208ENST00000616074 PROM1O43490 865 aa19.13■□□□□ 0.65
TRAPPC3-208ENST00000616074 TLX1P31314 330 aaPredicted RBP19.13■□□□□ 0.65
TRAPPC3-208ENST00000616074 STX2P32856 288 aa19.13■□□□□ 0.65
TRAPPC3-208ENST00000616074 BUD31P41223 144 aaPredicted RBP19.13■□□□□ 0.65
TRAPPC3-208ENST00000616074 MAGEA4P43358 317 aa19.13■□□□□ 0.65
TRAPPC3-208ENST00000616074 KCNJ2P63252 427 aa19.13■□□□□ 0.65
TRAPPC3-208ENST00000616074 MYBPHQ13203 477 aa19.13■□□□□ 0.65
TRAPPC3-208ENST00000616074 SETDB1Q15047 1291 aa19.13■□□□□ 0.65
TRAPPC3-208ENST00000616074 SPRED3Q2MJR0 410 aa19.13■□□□□ 0.65
TRAPPC3-208ENST00000616074 CLYBLQ8N0X4 340 aa19.13■□□□□ 0.65
TRAPPC3-208ENST00000616074 FBXW8Q8N3Y1 598 aa19.13■□□□□ 0.65
TRAPPC3-208ENST00000616074 OR10G3Q8NGC4 313 aa19.13■□□□□ 0.65
TRAPPC3-208ENST00000616074 ZFP64Q9NPA5 681 aa19.13■□□□□ 0.65
TRAPPC3-208ENST00000616074 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.13■□□□□ 0.65
TRAPPC3-208ENST00000616074 ALKBH4Q9NXW9 302 aa19.13■□□□□ 0.65
TRAPPC3-208ENST00000616074 ACOT9Q9Y305 439 aa19.13■□□□□ 0.65
TRAPPC3-208ENST00000616074 TSC22D4Q9Y3Q8 395 aa19.13■□□□□ 0.65
TRAPPC3-208ENST00000616074 ANGPTL3Q9Y5C1 460 aa19.13■□□□□ 0.65
TRAPPC3-208ENST00000616074 CHCHD2Q9Y6H1 151 aaPredicted RBP19.13■□□□□ 0.65
TRAPPC3-208ENST00000616074 FREM3P0C091 2139 aa19.12■□□□□ 0.65
TRAPPC3-208ENST00000616074 LRRC14BA6NHZ5 514 aa19.12■□□□□ 0.65
TRAPPC3-208ENST00000616074 SYCE1LA8MT33 242 aa19.12■□□□□ 0.65
TRAPPC3-208ENST00000616074 TMPRSS11DO60235 418 aa19.12■□□□□ 0.65
TRAPPC3-208ENST00000616074 EEDO75530 441 aaKnown RBP19.12■□□□□ 0.65
TRAPPC3-208ENST00000616074 LRATO95237 230 aa19.12■□□□□ 0.65
TRAPPC3-208ENST00000616074 FBXO45P0C2W1 286 aa19.12■□□□□ 0.65
TRAPPC3-208ENST00000616074 ARFIP1P53367 373 aa19.12■□□□□ 0.65
TRAPPC3-208ENST00000616074 NAB1Q13506 487 aa19.12■□□□□ 0.65
TRAPPC3-208ENST00000616074 ZNF267Q14586 743 aaPredicted RBP19.12■□□□□ 0.65
TRAPPC3-208ENST00000616074 EBPQ15125 230 aaKnown RBP19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms