RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 TAS2R50P59544 299 aa5.29□□□□□ -1.56
CPNE3-208ENST00000614678 TNFRSF17Q02223 184 aa5.29□□□□□ -1.56
CPNE3-208ENST00000614678 STX4Q12846 297 aa5.29□□□□□ -1.56
CPNE3-208ENST00000614678 MFAP5Q13361 173 aa5.29□□□□□ -1.56
CPNE3-208ENST00000614678 OR1C1Q15619 314 aa5.29□□□□□ -1.56
CPNE3-208ENST00000614678 MAPKAPK3Q16644 382 aa5.29□□□□□ -1.56
CPNE3-208ENST00000614678 MPEG1Q2M385 716 aa5.29□□□□□ -1.56
CPNE3-208ENST00000614678 RFTN2Q52LD8 501 aaPredicted RBP5.29□□□□□ -1.56
CPNE3-208ENST00000614678 IGFL3Q6UXB1 125 aa5.29□□□□□ -1.56
CPNE3-208ENST00000614678 CHSY3Q70JA7 882 aa5.29□□□□□ -1.56
CPNE3-208ENST00000614678 TAOK1Q7L7X3 1001 aa5.29□□□□□ -1.56
CPNE3-208ENST00000614678 PNPLA2Q96AD5 504 aa5.29□□□□□ -1.56
CPNE3-208ENST00000614678 MTBPQ96DY7 904 aa5.29□□□□□ -1.56
CPNE3-208ENST00000614678 RIC8BQ9NVN3 520 aa5.29□□□□□ -1.56
CPNE3-208ENST00000614678 CES1P1Q9UKY3 287 aa5.29□□□□□ -1.56
CPNE3-208ENST00000614678 KDM4EB2RXH2 506 aaPredicted RBP5.29□□□□□ -1.56
CPNE3-208ENST00000614678 GLRA3O75311 464 aa5.29□□□□□ -1.56
CPNE3-208ENST00000614678 TNNI3P19429 210 aa5.29□□□□□ -1.56
CPNE3-208ENST00000614678 SF3A3Q12874 501 aaKnown RBP eCLIP5.29□□□□□ -1.56
CPNE3-208ENST00000614678 LCP2Q13094 533 aa5.29□□□□□ -1.56
CPNE3-208ENST00000614678 ZNF169Q14929 603 aaPredicted RBP5.29□□□□□ -1.56
CPNE3-208ENST00000614678 UGT3A2Q3SY77 523 aa5.29□□□□□ -1.56
CPNE3-208ENST00000614678 CCNYL2Q5T2Q4 361 aa5.29□□□□□ -1.56
CPNE3-208ENST00000614678 PRAMEF20Q5VT98 475 aa5.29□□□□□ -1.56
CPNE3-208ENST00000614678 ZADH2Q8N4Q0 377 aa5.29□□□□□ -1.56
CPNE3-208ENST00000614678 ANKRD42Q8N9B4 389 aa5.29□□□□□ -1.56
CPNE3-208ENST00000614678 B3GNT7Q8NFL0 401 aa5.29□□□□□ -1.56
CPNE3-208ENST00000614678 EXOSC8Q96B26 276 aaKnown RBP5.29□□□□□ -1.56
CPNE3-208ENST00000614678 C11orf24Q96F05 449 aaPredicted RBP5.29□□□□□ -1.56
CPNE3-208ENST00000614678 APOPT1Q96IL0 206 aa5.29□□□□□ -1.56
CPNE3-208ENST00000614678 TBCDQ9BTW9 1192 aa5.29□□□□□ -1.56
CPNE3-208ENST00000614678 C1orf50Q9BV19 199 aa5.29□□□□□ -1.56
CPNE3-208ENST00000614678 VTI1BQ9UEU0 232 aa5.29□□□□□ -1.56
CPNE3-208ENST00000614678 DCDC2Q9UHG0 476 aa5.29□□□□□ -1.56
CPNE3-208ENST00000614678 ERRFI1Q9UJM3 462 aaPredicted RBP5.29□□□□□ -1.56
CPNE3-208ENST00000614678 ANAPC2Q9UJX6 822 aa5.29□□□□□ -1.56
CPNE3-208ENST00000614678 ERVK-11Q9UQG0 969 aa5.29□□□□□ -1.56
CPNE3-208ENST00000614678 ZNF451Q9Y4E5 1061 aa5.29□□□□□ -1.56
CPNE3-208ENST00000614678 TNPO3Q9Y5L0 923 aaKnown RBP5.29□□□□□ -1.56
CPNE3-208ENST00000614678 CTNSO60931 367 aa5.29□□□□□ -1.56
CPNE3-208ENST00000614678 SCELO95171 688 aa5.29□□□□□ -1.56
CPNE3-208ENST00000614678 CBX6O95503 412 aa5.29□□□□□ -1.56
CPNE3-208ENST00000614678 OTCP00480 354 aa5.29□□□□□ -1.56
CPNE3-208ENST00000614678 PTX3P26022 381 aaPredicted RBP5.29□□□□□ -1.56
CPNE3-208ENST00000614678 PIGAP37287 484 aa5.29□□□□□ -1.56
CPNE3-208ENST00000614678 PIK3CBP42338 1070 aa5.29□□□□□ -1.56
CPNE3-208ENST00000614678 WDR4P57081 412 aaKnown RBP5.29□□□□□ -1.56
CPNE3-208ENST00000614678 ZNF385BQ569K4 471 aa5.29□□□□□ -1.56
CPNE3-208ENST00000614678 SPDYAQ5MJ70 313 aa5.29□□□□□ -1.56
CPNE3-208ENST00000614678 H3F3CQ6NXT2 135 aa5.29□□□□□ -1.56
CPNE3-208ENST00000614678 RPS19BP1Q86WX3 136 aaKnown RBP5.29□□□□□ -1.56
CPNE3-208ENST00000614678 CCDC116Q8IYX3 515 aa5.29□□□□□ -1.56
CPNE3-208ENST00000614678 CLEC4FQ8N1N0 589 aa5.29□□□□□ -1.56
CPNE3-208ENST00000614678 METTL4Q8N3J2 472 aa5.29□□□□□ -1.56
CPNE3-208ENST00000614678 TBC1D19Q8N5T2 526 aa5.29□□□□□ -1.56
CPNE3-208ENST00000614678 OR4N2Q8NGD1 307 aa5.29□□□□□ -1.56
CPNE3-208ENST00000614678 OR52N2Q8NGI0 321 aa5.29□□□□□ -1.56
CPNE3-208ENST00000614678 CHTF18Q8WVB6 975 aa5.29□□□□□ -1.56
CPNE3-208ENST00000614678 CIDECQ96AQ7 238 aaPredicted RBP5.29□□□□□ -1.56
CPNE3-208ENST00000614678 GAL3ST4Q96RP7 486 aa5.29□□□□□ -1.56
CPNE3-208ENST00000614678 ZNF382Q96SR6 550 aa5.29□□□□□ -1.56
CPNE3-208ENST00000614678 KLHDC3Q9BQ90 382 aa5.29□□□□□ -1.56
CPNE3-208ENST00000614678 CAPS2Q9BXY5 557 aa5.29□□□□□ -1.56
CPNE3-208ENST00000614678 AKAP10O43572 662 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 ULK1O75385 1050 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 SASH3O75995 380 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 RSL1D1O76021 490 aaKnown RBP5.28□□□□□ -1.56
CPNE3-208ENST00000614678 ESRRBO95718 433 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 S1PR1P21453 382 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 BGNP21810 368 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 HK2P52789 917 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 CORO7P57737 925 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 MGAT2Q10469 447 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 IFT88Q13099 833 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 KIAA0040Q15053 153 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 GALNTL6Q49A17 601 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 LGSNQ5TDP6 509 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 EMBQ6PCB8 327 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 CYP20A1Q6UW02 462 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 OLIG3Q7RTU3 272 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 FGD2Q7Z6J4 655 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 ZNF781Q8N8C0 355 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 MDS2Q8NDY4 140 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 TTLQ8NG68 377 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 MAGED4Q96JG8 741 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 RASL10BQ96S79 203 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 MMP25Q9NPA2 562 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 LRFN1Q9P244 771 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 FETUBQ9UGM5 382 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 LGALS13Q9UHV8 139 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 PCDHGB7Q9Y5F8 929 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 CLCA3PQ9Y6N3 262 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 SPG11Q96JI7 2443 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 OR5H15A6NDH6 313 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 URADA6NGE7 173 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 PIP5K1BO14986 540 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 HS6ST1O60243 411 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 IGKV3-11P04433 115 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 RFPL3SP0C7P2 107 aa5.28□□□□□ -1.56
CPNE3-208ENST00000614678 CCL3P10147 92 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms