RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 SIRT3Q9NTG7 399 aaPredicted RBP3.25□□□□□ -1.89
LIG4-205ENST00000614526 OLAHQ9NV23 265 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 SOHLH2Q9NX45 425 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 ADPRHL2Q9NX46 363 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 PCOLCE2Q9UKZ9 415 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 ENTPD4Q9Y227 616 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 SIT1Q9Y3P8 196 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 NAALAD2Q9Y3Q0 740 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 A0A0A6YYC8 382 aaPredicted RBP3.24□□□□□ -1.89
LIG4-205ENST00000614526 PRAMEF27A3QJZ7 478 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 OR2A25A4D2G3 310 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 SYNDIG1LA6NDD5 238 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 C2orf74A8MZ97 194 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 TMEM229AB2RXF0 380 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 PTGES3LE9PB15 166 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 I3L1I5 382 aaPredicted RBP3.24□□□□□ -1.89
LIG4-205ENST00000614526 PROM1O43490 865 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 MAN1A2O60476 641 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 RDH16O75452 317 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 KRT75O95678 551 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 CAPNS1P04632 268 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 ALPLP05186 524 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 MATN1P21941 496 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 NTSP30990 170 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 AHRP35869 848 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 RPL3P39023 403 aaKnown RBP3.24□□□□□ -1.89
LIG4-205ENST00000614526 BLKP51451 505 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 ALDH3A2P51648 485 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 XKP51811 444 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 RP1P56715 2156 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 PCBP4P57723 403 aaKnown RBP3.24□□□□□ -1.89
LIG4-205ENST00000614526 FOXL2P58012 376 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 RPS15AP62244 130 aaKnown RBP3.24□□□□□ -1.89
LIG4-205ENST00000614526 KCNJ10P78508 379 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 HOXC5Q00444 222 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 SPIBQ01892 262 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 MLLT1Q03111 559 aaPredicted RBP3.24□□□□□ -1.89
LIG4-205ENST00000614526 ZP2Q05996 745 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 KIR2DS3Q14952 304 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 MEP1AQ16819 746 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 GPAT3Q53EU6 434 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 C10orf62Q5T681 223 aaPredicted RBP3.24□□□□□ -1.89
LIG4-205ENST00000614526 ERICH5Q6P6B1 374 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 FAM111BQ6SJ93 734 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 DEF8Q6ZN54 512 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 MSANTD1Q6ZTZ1 278 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 CBLL1Q75N03 491 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 EIF3MQ7L2H7 374 aaKnown RBP3.24□□□□□ -1.89
LIG4-205ENST00000614526 OOSP2Q86WS3 158 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 CARM1Q86X55 608 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 HOMEZQ8IX15 550 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 PRSS58Q8IYP2 241 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 NLGN4XQ8N0W4 816 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 ZCCHC7Q8N3Z6 543 aaKnown RBP3.24□□□□□ -1.89
LIG4-205ENST00000614526 CSNK1A1LQ8N752 337 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 ARL10Q8N8L6 244 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 TMEM52Q8NDY8 209 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 TTLQ8NG68 377 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 OR2I1PQ8NGU4 316 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 CLIP3Q96DZ5 547 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 RMND5BQ96G75 393 aaPredicted RBP3.24□□□□□ -1.89
LIG4-205ENST00000614526 PHF12Q96QT6 1004 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 AMBRA1Q9C0C7 1298 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 CHST8Q9H2A9 424 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 CXorf56Q9H5V9 222 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 SYNDIG1Q9H7V2 258 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 REEP1Q9H902 201 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 ADAP2Q9NPF8 381 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 BATF3Q9NR55 127 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 RASSF1Q9NS23 344 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 RLIMQ9NVW2 624 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 SIRT5Q9NXA8 310 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 HCN3Q9P1Z3 774 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 KIF17Q9P2E2 1029 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 RPS6KA6Q9UK32 745 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 DMTF1Q9Y222 760 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 SSUH2Q9Y2M2 353 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 MAU2Q9Y6X3 613 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 CHURC1-FNTBB4DL54 471 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 M0R129 80 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 HMGN4O00479 90 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 JRKO75564 520 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 UBXN7O94888 489 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 TNFAIP8O95379 198 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 NTN1O95631 604 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 TFAP2AP05549 437 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 SMIM18P0DKX4 95 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 NR2F6P10588 404 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 ALOX12P18054 663 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 CSNK2A2P19784 350 aaPredicted RBP3.24□□□□□ -1.89
LIG4-205ENST00000614526 AGXTP21549 392 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 ALAS2P22557 587 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 CAPGP40121 348 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 HSPA13P48723 471 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 FNTBP49356 437 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 DAPP51397 102 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 C21orf58P58505 322 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 UBE2IP63279 158 aaKnown RBP3.24□□□□□ -1.89
LIG4-205ENST00000614526 SELENOWP63302 87 aa3.24□□□□□ -1.89
LIG4-205ENST00000614526 LSM11P83369 360 aaKnown RBP eCLIP3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms