RNA–Protein interactions for RNA: ENST00000613122.4

CTDP1-208, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTDP1, Length 5,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-208ENST00000613122 GPR137CQ8N3F9 429 aa19.3■□□□□ 0.68
CTDP1-208ENST00000613122 ACVR1CQ8NER5 493 aa19.3■□□□□ 0.68
CTDP1-208ENST00000613122 OR51G2Q8NGK0 314 aa19.3■□□□□ 0.68
CTDP1-208ENST00000613122 FGF13Q92913 245 aa19.3■□□□□ 0.68
CTDP1-208ENST00000613122 MS4A4AQ96JQ5 239 aa19.3■□□□□ 0.68
CTDP1-208ENST00000613122 EIF3KQ9UBQ5 218 aaKnown RBP19.3■□□□□ 0.68
CTDP1-208ENST00000613122 PMF1-BGLAPU3KQ54 211 aa19.3■□□□□ 0.68
CTDP1-208ENST00000613122 SLC35E2BP0CK96 405 aa19.3■□□□□ 0.68
CTDP1-208ENST00000613122 ARSDP51689 593 aa19.3■□□□□ 0.68
CTDP1-208ENST00000613122 FIGNL1Q6PIW4 674 aa19.3■□□□□ 0.68
CTDP1-208ENST00000613122 MRPL43Q8N983 215 aaKnown RBP19.3■□□□□ 0.68
CTDP1-208ENST00000613122 ZUFSPQ96AP4 578 aa19.3■□□□□ 0.68
CTDP1-208ENST00000613122 CCDC115Q96NT0 180 aa19.3■□□□□ 0.68
CTDP1-208ENST00000613122 SLC22A4Q9H015 551 aa19.3■□□□□ 0.68
CTDP1-208ENST00000613122 TMPRSS11EQ9UL52 423 aa19.3■□□□□ 0.68
CTDP1-208ENST00000613122 GALNT10Q86SR1 603 aa19.29■□□□□ 0.68
CTDP1-208ENST00000613122 TMEM135Q86UB9 458 aa19.29■□□□□ 0.68
CTDP1-208ENST00000613122 PGAP3Q96FM1 320 aaPredicted RBP19.29■□□□□ 0.68
CTDP1-208ENST00000613122 TOX2Q96NM4 488 aa19.29■□□□□ 0.68
CTDP1-208ENST00000613122 PIP5K1AQ99755 562 aa19.29■□□□□ 0.68
CTDP1-208ENST00000613122 DCSTAMPQ9H295 470 aa19.29■□□□□ 0.68
CTDP1-208ENST00000613122 MTG2Q9H4K7 406 aa19.29■□□□□ 0.68
CTDP1-208ENST00000613122 TEX13DA0A0J9YY54 714 aaPredicted RBP19.29■□□□□ 0.68
CTDP1-208ENST00000613122 TAS2R38P59533 333 aa19.29■□□□□ 0.68
CTDP1-208ENST00000613122 MALLQ13021 153 aa19.29■□□□□ 0.68
CTDP1-208ENST00000613122 GRB7Q14451 532 aa19.29■□□□□ 0.68
CTDP1-208ENST00000613122 CES4AQ5XG92 561 aa19.29■□□□□ 0.68
CTDP1-208ENST00000613122 NLGN4XQ8N0W4 816 aa19.29■□□□□ 0.68
CTDP1-208ENST00000613122 HLA-CQ95604 372 aa19.29■□□□□ 0.68
CTDP1-208ENST00000613122 SGTBQ96EQ0 304 aa19.29■□□□□ 0.68
CTDP1-208ENST00000613122 SAGE1Q9NXZ1 904 aa19.29■□□□□ 0.68
CTDP1-208ENST00000613122 CDRT1O95170 752 aa19.29■□□□□ 0.68
CTDP1-208ENST00000613122 GRIN2CQ14957 1233 aa19.29■□□□□ 0.68
CTDP1-208ENST00000613122 KLHDC10Q6PID8 442 aa19.29■□□□□ 0.68
CTDP1-208ENST00000613122 LARP4Q71RC2 724 aaKnown RBP eCLIP19.29■□□□□ 0.68
CTDP1-208ENST00000613122 OR14L1PQ8NHC6 308 aa19.29■□□□□ 0.68
CTDP1-208ENST00000613122 S100A16Q96FQ6 103 aaKnown RBP19.29■□□□□ 0.68
CTDP1-208ENST00000613122 TOE1Q96GM8 510 aaKnown RBP19.29■□□□□ 0.68
CTDP1-208ENST00000613122 BOCQ9BWV1 1114 aa19.29■□□□□ 0.68
CTDP1-208ENST00000613122 SARDHQ9UL12 918 aa19.29■□□□□ 0.68
CTDP1-208ENST00000613122 RPL19P84098 196 aaKnown RBP19.29■□□□□ 0.68
CTDP1-208ENST00000613122 VMACQ2NL98 169 aa19.29■□□□□ 0.68
CTDP1-208ENST00000613122 OR8H1Q8NGG4 311 aa19.29■□□□□ 0.68
CTDP1-208ENST00000613122 OR51A7Q8NH64 312 aa19.29■□□□□ 0.68
CTDP1-208ENST00000613122 MROQ9BYG7 248 aa19.29■□□□□ 0.68
CTDP1-208ENST00000613122 ENTPD2Q9Y5L3 495 aa19.29■□□□□ 0.68
CTDP1-208ENST00000613122 TMEM189-UBE2V1I3L0A0 370 aa19.28■□□□□ 0.68
CTDP1-208ENST00000613122 SCAMP2O15127 329 aaKnown RBP19.28■□□□□ 0.68
CTDP1-208ENST00000613122 GALK2Q01415 458 aa19.28■□□□□ 0.68
CTDP1-208ENST00000613122 GLT8D1Q68CQ7 371 aa19.28■□□□□ 0.68
CTDP1-208ENST00000613122 SLC27A4Q6P1M0 643 aa19.28■□□□□ 0.68
CTDP1-208ENST00000613122 ZNF554Q86TJ5 538 aa19.28■□□□□ 0.68
CTDP1-208ENST00000613122 SNX29P2Q8IUI4 249 aa19.28■□□□□ 0.68
CTDP1-208ENST00000613122 LIX1LQ8IVB5 337 aa19.28■□□□□ 0.68
CTDP1-208ENST00000613122 CDH10Q9Y6N8 788 aa19.28■□□□□ 0.68
CTDP1-208ENST00000613122 DPPA5A6NC42 116 aa19.28■□□□□ 0.68
CTDP1-208ENST00000613122 CPNE6O95741 557 aa19.28■□□□□ 0.68
CTDP1-208ENST00000613122 PEPDP12955 493 aa19.28■□□□□ 0.68
CTDP1-208ENST00000613122 ADAM15Q13444 863 aa19.28■□□□□ 0.68
CTDP1-208ENST00000613122 SCD5Q86SK9 330 aa19.28■□□□□ 0.68
CTDP1-208ENST00000613122 INO80EQ8NBZ0 244 aaPredicted RBP19.28■□□□□ 0.68
CTDP1-208ENST00000613122 PSD4Q8NDX1 1056 aa19.28■□□□□ 0.68
CTDP1-208ENST00000613122 BARD1Q99728 777 aaKnown RBP19.28■□□□□ 0.68
CTDP1-208ENST00000613122 TOR3AQ9H497 397 aa19.28■□□□□ 0.68
CTDP1-208ENST00000613122 ANKMY1Q9P2S6 941 aa19.28■□□□□ 0.68
CTDP1-208ENST00000613122 PCDHGB6Q9Y5F9 930 aa19.28■□□□□ 0.68
CTDP1-208ENST00000613122 OR2AT4A6NND4 320 aa19.28■□□□□ 0.68
CTDP1-208ENST00000613122 OR7A10O76100 309 aa19.28■□□□□ 0.68
CTDP1-208ENST00000613122 ALDOAP04075 364 aaKnown RBP19.28■□□□□ 0.68
CTDP1-208ENST00000613122 GAS6Q14393 721 aa19.28■□□□□ 0.68
CTDP1-208ENST00000613122 HNRNPA1L2Q32P51 320 aaKnown RBP19.28■□□□□ 0.68
CTDP1-208ENST00000613122 RBM12BQ8IXT5 1001 aaKnown RBP19.28■□□□□ 0.68
CTDP1-208ENST00000613122 PDLIM7Q9NR12 457 aa19.28■□□□□ 0.68
CTDP1-208ENST00000613122 EIF3FO00303 357 aaPredicted RBP19.28■□□□□ 0.68
CTDP1-208ENST00000613122 ACADVLP49748 655 aa19.28■□□□□ 0.68
CTDP1-208ENST00000613122 UBE2NP61088 152 aaKnown RBP19.28■□□□□ 0.68
CTDP1-208ENST00000613122 SRYQ05066 204 aa19.28■□□□□ 0.68
CTDP1-208ENST00000613122 CRYZQ08257 329 aaKnown RBP19.28■□□□□ 0.68
CTDP1-208ENST00000613122 CLCA4Q14CN2 919 aa19.28■□□□□ 0.68
CTDP1-208ENST00000613122 PGAM5Q96HS1 289 aa19.28■□□□□ 0.68
CTDP1-208ENST00000613122 KLF16Q9BXK1 252 aaPredicted RBP19.28■□□□□ 0.68
CTDP1-208ENST00000613122 PRAMEF2O60811 474 aa19.28■□□□□ 0.68
CTDP1-208ENST00000613122 LRRC69Q6ZNQ3 347 aa19.28■□□□□ 0.68
CTDP1-208ENST00000613122 ZNF559Q9BR84 538 aa19.28■□□□□ 0.68
CTDP1-208ENST00000613122 HOXD1Q9GZZ0 328 aa19.28■□□□□ 0.68
CTDP1-208ENST00000613122 MED11Q9P086 117 aa19.28■□□□□ 0.68
CTDP1-208ENST00000613122 OR4D1Q15615 310 aa19.27■□□□□ 0.68
CTDP1-208ENST00000613122 HMGN2P46Q86SG4 172 aa19.27■□□□□ 0.68
CTDP1-208ENST00000613122 TRIM73Q86UV7 250 aa19.27■□□□□ 0.68
CTDP1-208ENST00000613122 DDIT4LQ96D03 193 aa19.27■□□□□ 0.68
CTDP1-208ENST00000613122 ZNF69Q9UC07 566 aa19.27■□□□□ 0.68
CTDP1-208ENST00000613122 NUP188Q5SRE5 1749 aa19.27■□□□□ 0.68
CTDP1-208ENST00000613122 CHD2O14647 1828 aaKnown RBP19.27■□□□□ 0.68
CTDP1-208ENST00000613122 A6NLC8 198 aa19.27■□□□□ 0.68
CTDP1-208ENST00000613122 GJE1A6NN92 205 aa19.27■□□□□ 0.68
CTDP1-208ENST00000613122 SDHDO14521 159 aa19.27■□□□□ 0.68
CTDP1-208ENST00000613122 PRKCAP17252 672 aa19.27■□□□□ 0.68
CTDP1-208ENST00000613122 CWF19L1Q69YN2 538 aaKnown RBP19.27■□□□□ 0.68
CTDP1-208ENST00000613122 OR8K3Q8NH51 312 aa19.27■□□□□ 0.68
CTDP1-208ENST00000613122 SERINC2Q96SA4 455 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms