RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 TEX264Q9Y6I9 313 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 DAPL1A0PJW8 107 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 UBE2Q2LH0YL09 131 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 DGKGP49619 791 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 RBP2P50120 134 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 SCNN1GP51170 649 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 PTTG1IPP53801 180 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 BCAT1P54687 386 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 KCNRGQ8N5I3 272 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 SEMA4CQ9C0C4 833 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 DKKL1Q9UK85 242 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 SCML2Q9UQR0 700 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 IGFBP1P08833 259 aaPredicted RBP4.76□□□□□ -1.65
VPS13D-213ENST00000613099 TACSTD2P09758 323 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 PREPP48147 710 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 KCNC3Q14003 757 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 ZMAT1Q5H9K5 638 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 B3GNTL1Q67FW5 361 aaPredicted RBP4.76□□□□□ -1.65
VPS13D-213ENST00000613099 UNC5DQ6UXZ4 953 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 SLC24A4Q8NFF2 622 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 MRI1Q9BV20 369 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 SRRQ9GZT4 340 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 LHX5Q9H2C1 402 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 ROBO2Q9HCK4 1378 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 SMLR1H3BR10 107 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 CREG1O75629 220 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 BMP7P18075 431 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 FHITP49789 147 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 LINGO1Q96FE5 620 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 CPVLQ9H3G5 476 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 DOCK5Q9H7D0 1870 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 RIPK3Q9Y572 518 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 ELOA3CA0A087WX78 387 aaPredicted RBP4.76□□□□□ -1.65
VPS13D-213ENST00000613099 FLRT2O43155 660 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 BMI1P35226 326 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 DLSTP36957 453 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 TAF6P49848 677 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 CD300CQ08708 224 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 FBXO47Q5MNV8 452 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 MFSD14BQ5SR56 506 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 AWAT2Q6E213 333 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 ADGRG5Q8IZF4 528 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 ISYNA1Q9NPH2 558 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 DDX4Q9NQI0 724 aaKnown RBP4.76□□□□□ -1.65
VPS13D-213ENST00000613099 SMPD4Q9NXE4 827 aa4.76□□□□□ -1.65
VPS13D-213ENST00000613099 LRP6O75581 1613 aa4.75□□□□□ -1.65
VPS13D-213ENST00000613099 OR6C75A6NL08 312 aa4.75□□□□□ -1.65
VPS13D-213ENST00000613099 K7ERQ8 282 aa4.75□□□□□ -1.65
VPS13D-213ENST00000613099 CTDSP2O14595 271 aa4.75□□□□□ -1.65
VPS13D-213ENST00000613099 ABCD4O14678 606 aa4.75□□□□□ -1.65
VPS13D-213ENST00000613099 SLC16A6O15403 523 aa4.75□□□□□ -1.65
VPS13D-213ENST00000613099 MMP7P09237 267 aaPredicted RBP4.75□□□□□ -1.65
VPS13D-213ENST00000613099 SLC2A1P11166 492 aa4.75□□□□□ -1.65
VPS13D-213ENST00000613099 TBCEQ15813 527 aaPredicted RBP4.75□□□□□ -1.65
VPS13D-213ENST00000613099 HLFQ16534 295 aa4.75□□□□□ -1.65
VPS13D-213ENST00000613099 MOGAT2Q3SYC2 334 aa4.75□□□□□ -1.65
VPS13D-213ENST00000613099 LEXMQ3ZCV2 418 aa4.75□□□□□ -1.65
VPS13D-213ENST00000613099 TMPRSS11BQ86T26 416 aa4.75□□□□□ -1.65
VPS13D-213ENST00000613099 C4orf32Q8N8J7 132 aa4.75□□□□□ -1.65
VPS13D-213ENST00000613099 TMEM102Q8N9M5 508 aaPredicted RBP4.75□□□□□ -1.65
VPS13D-213ENST00000613099 SLC7A13Q8TCU3 470 aa4.75□□□□□ -1.65
VPS13D-213ENST00000613099 LOC285095A0A1B0GVY8 99 aa4.75□□□□□ -1.65
VPS13D-213ENST00000613099 PRORSD1PA6NEY8 169 aa4.75□□□□□ -1.65
VPS13D-213ENST00000613099 E7EQ34 232 aa4.75□□□□□ -1.65
VPS13D-213ENST00000613099 GOSR2O14653 212 aa4.75□□□□□ -1.65
VPS13D-213ENST00000613099 ATG12O94817 140 aa4.75□□□□□ -1.65
VPS13D-213ENST00000613099 FGF4P08620 206 aa4.75□□□□□ -1.65
VPS13D-213ENST00000613099 FGF3P11487 239 aaPredicted RBP4.75□□□□□ -1.65
VPS13D-213ENST00000613099 PRDX5P30044 214 aa4.75□□□□□ -1.65
VPS13D-213ENST00000613099 CCR10P46092 362 aa4.75□□□□□ -1.65
VPS13D-213ENST00000613099 SPOUT1Q5T280 376 aaKnown RBP4.75□□□□□ -1.65
VPS13D-213ENST00000613099 DPY19L2P1Q6NXN4 242 aa4.75□□□□□ -1.65
VPS13D-213ENST00000613099 SLC39A4Q6P5W5 647 aa4.75□□□□□ -1.65
VPS13D-213ENST00000613099 ALKAL2Q6UX46 152 aa4.75□□□□□ -1.65
VPS13D-213ENST00000613099 OTOP1Q7RTM1 612 aa4.75□□□□□ -1.65
VPS13D-213ENST00000613099 LILRA2Q8N149 483 aa4.75□□□□□ -1.65
VPS13D-213ENST00000613099 NAXEQ8NCW5 288 aa4.75□□□□□ -1.65
VPS13D-213ENST00000613099 AIG1Q9NVV5 245 aa4.75□□□□□ -1.65
VPS13D-213ENST00000613099 IQCMA0A1B0GVH7 501 aa4.75□□□□□ -1.65
VPS13D-213ENST00000613099 NME6O75414 186 aaPredicted RBP4.75□□□□□ -1.65
VPS13D-213ENST00000613099 ART1P52961 327 aa4.75□□□□□ -1.65
VPS13D-213ENST00000613099 UBE2KP61086 200 aa4.75□□□□□ -1.65
VPS13D-213ENST00000613099 MTMR1Q13613 665 aa4.75□□□□□ -1.65
VPS13D-213ENST00000613099 FAM174BQ3ZCQ3 159 aa4.75□□□□□ -1.65
VPS13D-213ENST00000613099 NIPA2Q8N8Q9 360 aa4.75□□□□□ -1.65
VPS13D-213ENST00000613099 ZNF610Q8N9Z0 462 aa4.75□□□□□ -1.65
VPS13D-213ENST00000613099 DNAAF1Q8NEP3 725 aa4.75□□□□□ -1.65
VPS13D-213ENST00000613099 OR8J1Q8NGP2 316 aa4.75□□□□□ -1.65
VPS13D-213ENST00000613099 SOCS4Q8WXH5 440 aa4.75□□□□□ -1.65
VPS13D-213ENST00000613099 TSSK6Q9BXA6 273 aa4.75□□□□□ -1.65
VPS13D-213ENST00000613099 ALX4Q9H161 411 aaPredicted RBP4.75□□□□□ -1.65
VPS13D-213ENST00000613099 FBXL2Q9UKC9 423 aa4.75□□□□□ -1.65
VPS13D-213ENST00000613099 A0A1W2PRB8 838 aa4.75□□□□□ -1.65
VPS13D-213ENST00000613099 ENPP3O14638 875 aa4.75□□□□□ -1.65
VPS13D-213ENST00000613099 AGR2O95994 175 aa4.75□□□□□ -1.65
VPS13D-213ENST00000613099 TAS2R41P59536 307 aa4.75□□□□□ -1.65
VPS13D-213ENST00000613099 TAS2R31P59538 309 aa4.75□□□□□ -1.65
VPS13D-213ENST00000613099 NFIXQ14938 502 aa4.75□□□□□ -1.65
VPS13D-213ENST00000613099 TMEM132DQ14C87 1099 aa4.75□□□□□ -1.65
VPS13D-213ENST00000613099 PDE12Q6L8Q7 609 aaKnown RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms