RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 RADILQ96JH8 1075 aa15.21■□□□□ 0.03
RTN1-209ENST00000611068 SLC22A4Q9H015 551 aa15.21■□□□□ 0.03
RTN1-209ENST00000611068 FZD3Q9NPG1 666 aa15.21■□□□□ 0.03
RTN1-209ENST00000611068 RASSF1Q9NS23 344 aa15.21■□□□□ 0.03
RTN1-209ENST00000611068 TM7SF3Q9NS93 570 aa15.21■□□□□ 0.03
RTN1-209ENST00000611068 OARD1Q9Y530 152 aa15.21■□□□□ 0.03
RTN1-209ENST00000611068 CACNG2Q9Y698 323 aa15.21■□□□□ 0.03
RTN1-209ENST00000611068 ZNF106Q9H2Y7 1883 aaKnown RBP15.21■□□□□ 0.03
RTN1-209ENST00000611068 A0A096LPI6 279 aa15.21■□□□□ 0.03
RTN1-209ENST00000611068 RPS10-NUDT3A0A1W2PQS6 291 aa15.21■□□□□ 0.03
RTN1-209ENST00000611068 GRXCR2A6NFK2 248 aa15.21■□□□□ 0.03
RTN1-209ENST00000611068 STX16O14662 325 aa15.21■□□□□ 0.03
RTN1-209ENST00000611068 HGFP14210 728 aa15.21■□□□□ 0.03
RTN1-209ENST00000611068 CHMP24386 653 aa15.21■□□□□ 0.03
RTN1-209ENST00000611068 C21orf33P30042 268 aaPredicted RBP15.21■□□□□ 0.03
RTN1-209ENST00000611068 KIR2DL1P43626 348 aaPredicted RBP15.21■□□□□ 0.03
RTN1-209ENST00000611068 CRISP3P54108 245 aa15.21■□□□□ 0.03
RTN1-209ENST00000611068 ELP6Q0PNE2 266 aa15.21■□□□□ 0.03
RTN1-209ENST00000611068 MADCAM1Q13477 382 aa15.21■□□□□ 0.03
RTN1-209ENST00000611068 TMEM196Q5HYL7 178 aa15.21■□□□□ 0.03
RTN1-209ENST00000611068 KANK2Q63ZY3 851 aa15.21■□□□□ 0.03
RTN1-209ENST00000611068 LRFN4Q6PJG9 635 aa15.21■□□□□ 0.03
RTN1-209ENST00000611068 PM20D2Q8IYS1 436 aa15.21■□□□□ 0.03
RTN1-209ENST00000611068 KBTBD8Q8NFY9 601 aa15.21■□□□□ 0.03
RTN1-209ENST00000611068 OR56A4Q8NGH8 313 aa15.21■□□□□ 0.03
RTN1-209ENST00000611068 OR2T11Q8NH01 316 aa15.21■□□□□ 0.03
RTN1-209ENST00000611068 METTL6Q8TCB7 284 aa15.21■□□□□ 0.03
RTN1-209ENST00000611068 RIBC2Q9H4K1 309 aa15.21■□□□□ 0.03
RTN1-209ENST00000611068 MBNL1Q9NR56 388 aaKnown RBP15.21■□□□□ 0.03
RTN1-209ENST00000611068 ALG5Q9Y673 324 aa15.21■□□□□ 0.03
RTN1-209ENST00000611068 LAMA1P25391 3075 aa15.21■□□□□ 0.02
RTN1-209ENST00000611068 LATO43561 262 aa15.2■□□□□ 0.02
RTN1-209ENST00000611068 ADAM11O75078 769 aa15.2■□□□□ 0.02
RTN1-209ENST00000611068 KLF8O95600 359 aaPredicted RBP15.2■□□□□ 0.02
RTN1-209ENST00000611068 COL9A1P20849 921 aa15.2■□□□□ 0.02
RTN1-209ENST00000611068 HLA-DMAP28067 261 aa15.2■□□□□ 0.02
RTN1-209ENST00000611068 CTHP32929 405 aa15.2■□□□□ 0.02
RTN1-209ENST00000611068 BDKRB1P46663 353 aa15.2■□□□□ 0.02
RTN1-209ENST00000611068 DIO3P55073 304 aa15.2■□□□□ 0.02
RTN1-209ENST00000611068 DCDC1P59894 354 aa15.2■□□□□ 0.02
RTN1-209ENST00000611068 TIGD6Q17RP2 521 aa15.2■□□□□ 0.02
RTN1-209ENST00000611068 HKDC1Q2TB90 917 aa15.2■□□□□ 0.02
RTN1-209ENST00000611068 ZNF704Q6ZNC4 412 aaPredicted RBP15.2■□□□□ 0.02
RTN1-209ENST00000611068 OR14C36Q8NHC7 312 aa15.2■□□□□ 0.02
RTN1-209ENST00000611068 KLHL6Q8WZ60 621 aa15.2■□□□□ 0.02
RTN1-209ENST00000611068 LINC00052Q96N35 136 aa15.2■□□□□ 0.02
RTN1-209ENST00000611068 ELOVL6Q9H5J4 265 aa15.2■□□□□ 0.02
RTN1-209ENST00000611068 MCUBQ9NWR8 336 aa15.2■□□□□ 0.02
RTN1-209ENST00000611068 POLG2Q9UHN1 485 aa15.2■□□□□ 0.02
RTN1-209ENST00000611068 KLF2Q9Y5W3 355 aaPredicted RBP15.2■□□□□ 0.02
RTN1-209ENST00000611068 PIAS3Q9Y6X2 628 aa15.2■□□□□ 0.02
RTN1-209ENST00000611068 RPLP0P05388 317 aaKnown RBP15.2■□□□□ 0.02
RTN1-209ENST00000611068 PCSK2P16519 638 aa15.2■□□□□ 0.02
RTN1-209ENST00000611068 AKR1D1P51857 326 aa15.2■□□□□ 0.02
RTN1-209ENST00000611068 TOR1AIP1Q5JTV8 583 aa15.2■□□□□ 0.02
RTN1-209ENST00000611068 AGBL4Q5VU57 503 aa15.2■□□□□ 0.02
RTN1-209ENST00000611068 IL27RAQ6UWB1 636 aa15.2■□□□□ 0.02
RTN1-209ENST00000611068 SLC46A3Q7Z3Q1 461 aa15.2■□□□□ 0.02
RTN1-209ENST00000611068 PHYKPLQ8IUZ5 450 aa15.2■□□□□ 0.02
RTN1-209ENST00000611068 C2orf73Q8N5S3 287 aaPredicted RBP15.2■□□□□ 0.02
RTN1-209ENST00000611068 CAMKK1Q8N5S9 505 aa15.2■□□□□ 0.02
RTN1-209ENST00000611068 IL17RCQ8NAC3 791 aa15.2■□□□□ 0.02
RTN1-209ENST00000611068 PTP4A1Q93096 173 aa15.2■□□□□ 0.02
RTN1-209ENST00000611068 KCNK12Q9HB15 430 aa15.2■□□□□ 0.02
RTN1-209ENST00000611068 PRM3Q9NNZ6 103 aa15.2■□□□□ 0.02
RTN1-209ENST00000611068 GULP1Q9UBP9 304 aa15.2■□□□□ 0.02
RTN1-209ENST00000611068 DNAJB9Q9UBS3 223 aa15.2■□□□□ 0.02
RTN1-209ENST00000611068 CFAP20Q9Y6A4 193 aaKnown RBP15.2■□□□□ 0.02
RTN1-209ENST00000611068 PRSS44E7EML9 344 aa15.19■□□□□ 0.02
RTN1-209ENST00000611068 IFNA14P01570 189 aa15.19■□□□□ 0.02
RTN1-209ENST00000611068 ZNF8P17098 575 aaPredicted RBP15.19■□□□□ 0.02
RTN1-209ENST00000611068 HTR1EP28566 365 aa15.19■□□□□ 0.02
RTN1-209ENST00000611068 EPHA2P29317 976 aa15.19■□□□□ 0.02
RTN1-209ENST00000611068 DCTP40126 519 aa15.19■□□□□ 0.02
RTN1-209ENST00000611068 VASPP50552 380 aaPredicted RBP15.19■□□□□ 0.02
RTN1-209ENST00000611068 GBX2P52951 348 aaPredicted RBP15.19■□□□□ 0.02
RTN1-209ENST00000611068 GPR19Q15760 415 aa15.19■□□□□ 0.02
RTN1-209ENST00000611068 BLOC1S3Q6QNY0 202 aa15.19■□□□□ 0.02
RTN1-209ENST00000611068 MILR1Q7Z6M3 343 aa15.19■□□□□ 0.02
RTN1-209ENST00000611068 PROSER1Q86XN7 944 aa15.19■□□□□ 0.02
RTN1-209ENST00000611068 GPALPP1Q8IXQ4 340 aa15.19■□□□□ 0.02
RTN1-209ENST00000611068 ASZ1Q8WWH4 475 aa15.19■□□□□ 0.02
RTN1-209ENST00000611068 INTS12Q96CB8 462 aaKnown RBP15.19■□□□□ 0.02
RTN1-209ENST00000611068 BARD1Q99728 777 aaKnown RBP15.19■□□□□ 0.02
RTN1-209ENST00000611068 CD244Q9BZW8 370 aa15.19■□□□□ 0.02
RTN1-209ENST00000611068 LINC00587B1AMM8 73 aa15.19■□□□□ 0.02
RTN1-209ENST00000611068 LOC730098B7Z3J9 87 aa15.19■□□□□ 0.02
RTN1-209ENST00000611068 RETP07949 1114 aa15.19■□□□□ 0.02
RTN1-209ENST00000611068 BMP8BP34820 402 aa15.19■□□□□ 0.02
RTN1-209ENST00000611068 EEFSECP57772 596 aaKnown RBP15.19■□□□□ 0.02
RTN1-209ENST00000611068 TFF2Q03403 129 aa15.19■□□□□ 0.02
RTN1-209ENST00000611068 FOXM1Q08050 763 aa15.19■□□□□ 0.02
RTN1-209ENST00000611068 CPSF6Q16630 551 aaKnown RBP eCLIP15.19■□□□□ 0.02
RTN1-209ENST00000611068 NUDT18Q6ZVK8 323 aa15.19■□□□□ 0.02
RTN1-209ENST00000611068 RNF175Q8N4F7 328 aa15.19■□□□□ 0.02
RTN1-209ENST00000611068 OR8K5Q8NH50 307 aa15.19■□□□□ 0.02
RTN1-209ENST00000611068 ASB11Q8WXH4 323 aa15.19■□□□□ 0.02
RTN1-209ENST00000611068 TMEM159Q96B96 161 aa15.19■□□□□ 0.02
RTN1-209ENST00000611068 SLC22A14Q9Y267 594 aa15.19■□□□□ 0.02
RTN1-209ENST00000611068 MUC3AQ02505 3323 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms