RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 PUM1Q14671 1186 aaKnown RBP eCLIP12.89□□□□□ -0.35
NEK3-205ENST00000610828 TJAP1Q5JTD0 557 aa12.89□□□□□ -0.35
NEK3-205ENST00000610828 ENTHD1Q8IYW4 607 aa12.89□□□□□ -0.35
NEK3-205ENST00000610828 SMRP1Q8NCR6 262 aa12.89□□□□□ -0.35
NEK3-205ENST00000610828 XAGE5Q8WWM1 108 aa12.89□□□□□ -0.35
NEK3-205ENST00000610828 MUL1Q969V5 352 aa12.89□□□□□ -0.35
NEK3-205ENST00000610828 SLC35G5Q96KT7 338 aa12.89□□□□□ -0.35
NEK3-205ENST00000610828 FCRL4Q96PJ5 515 aa12.89□□□□□ -0.35
NEK3-205ENST00000610828 GDF15Q99988 308 aa12.89□□□□□ -0.35
NEK3-205ENST00000610828 OR51I1Q9H343 314 aa12.89□□□□□ -0.35
NEK3-205ENST00000610828 SRMSQ9H3Y6 488 aa12.89□□□□□ -0.35
NEK3-205ENST00000610828 SERHL2Q9H4I8 314 aa12.89□□□□□ -0.35
NEK3-205ENST00000610828 TRPC4Q9UBN4 977 aa12.89□□□□□ -0.35
NEK3-205ENST00000610828 SNX7Q9UNH6 387 aa12.89□□□□□ -0.35
NEK3-205ENST00000610828 ASB4Q9Y574 426 aa12.89□□□□□ -0.35
NEK3-205ENST00000610828 PCDHGA2Q9Y5H1 932 aa12.89□□□□□ -0.35
NEK3-205ENST00000610828 NINQ8N4C6 2090 aa12.89□□□□□ -0.35
NEK3-205ENST00000610828 SLC28A2O43868 658 aa12.89□□□□□ -0.35
NEK3-205ENST00000610828 GUCY1B2O75343 617 aa12.89□□□□□ -0.35
NEK3-205ENST00000610828 MFN2O95140 757 aa12.89□□□□□ -0.35
NEK3-205ENST00000610828 VIPP01282 170 aa12.89□□□□□ -0.35
NEK3-205ENST00000610828 ASGR2P07307 311 aa12.89□□□□□ -0.35
NEK3-205ENST00000610828 ITIH1P19827 911 aa12.89□□□□□ -0.35
NEK3-205ENST00000610828 CCNA2P20248 432 aa12.89□□□□□ -0.35
NEK3-205ENST00000610828 KRT20P35900 424 aa12.89□□□□□ -0.35
NEK3-205ENST00000610828 SFSWAPQ12872 951 aaKnown RBP12.89□□□□□ -0.35
NEK3-205ENST00000610828 SYPL1Q16563 259 aa12.89□□□□□ -0.35
NEK3-205ENST00000610828 ZNF750Q32MQ0 723 aa12.89□□□□□ -0.35
NEK3-205ENST00000610828 C18orf63Q68DL7 685 aa12.89□□□□□ -0.35
NEK3-205ENST00000610828 ZNF425Q6IV72 752 aa12.89□□□□□ -0.35
NEK3-205ENST00000610828 ZNF605Q86T29 641 aa12.89□□□□□ -0.35
NEK3-205ENST00000610828 TRIM69Q86WT6 500 aa12.89□□□□□ -0.35
NEK3-205ENST00000610828 TAGAPQ8N103 731 aa12.89□□□□□ -0.35
NEK3-205ENST00000610828 MFSD9Q8NBP5 474 aa12.89□□□□□ -0.35
NEK3-205ENST00000610828 RAB2BQ8WUD1 216 aa12.89□□□□□ -0.35
NEK3-205ENST00000610828 PROX1Q92786 737 aa12.89□□□□□ -0.35
NEK3-205ENST00000610828 OTUB1Q96FW1 271 aaPredicted RBP12.89□□□□□ -0.35
NEK3-205ENST00000610828 NECTIN4Q96NY8 510 aa12.89□□□□□ -0.35
NEK3-205ENST00000610828 SARGQ9BW04 601 aa12.89□□□□□ -0.35
NEK3-205ENST00000610828 DUSP21Q9H596 190 aa12.89□□□□□ -0.35
NEK3-205ENST00000610828 OCEL1Q9H607 264 aa12.89□□□□□ -0.35
NEK3-205ENST00000610828 ZNF556Q9HAH1 456 aa12.89□□□□□ -0.35
NEK3-205ENST00000610828 APOBEC3BQ9UH17 382 aaKnown RBP12.89□□□□□ -0.35
NEK3-205ENST00000610828 CD207Q9UJ71 328 aa12.89□□□□□ -0.35
NEK3-205ENST00000610828 POFUT2Q9Y2G5 429 aa12.89□□□□□ -0.35
NEK3-205ENST00000610828 LRRC72A6NJI9 287 aa12.88□□□□□ -0.35
NEK3-205ENST00000610828 ZW10O43264 779 aa12.88□□□□□ -0.35
NEK3-205ENST00000610828 PDE9AO76083 593 aa12.88□□□□□ -0.35
NEK3-205ENST00000610828 APBB3O95704 486 aa12.88□□□□□ -0.35
NEK3-205ENST00000610828 AIFM1O95831 613 aa12.88□□□□□ -0.35
NEK3-205ENST00000610828 C8orf89P0DMQ9 161 aa12.88□□□□□ -0.35
NEK3-205ENST00000610828 CD247P20963 164 aa12.88□□□□□ -0.35
NEK3-205ENST00000610828 SLC19A1P41440 591 aa12.88□□□□□ -0.35
NEK3-205ENST00000610828 MAPK11Q15759 364 aa12.88□□□□□ -0.35
NEK3-205ENST00000610828 C11orf91Q3C1V1 193 aa12.88□□□□□ -0.35
NEK3-205ENST00000610828 MRM1Q6IN84 353 aaKnown RBP12.88□□□□□ -0.35
NEK3-205ENST00000610828 CCDC81Q6ZN84 652 aa12.88□□□□□ -0.35
NEK3-205ENST00000610828 CCDC116Q8IYX3 515 aa12.88□□□□□ -0.35
NEK3-205ENST00000610828 SRFBP1Q8NEF9 429 aaKnown RBP12.88□□□□□ -0.35
NEK3-205ENST00000610828 GPR32P1Q8NGA4 272 aa12.88□□□□□ -0.35
NEK3-205ENST00000610828 FAM81AQ8TBF8 368 aa12.88□□□□□ -0.35
NEK3-205ENST00000610828 THAP11Q96EK4 314 aa12.88□□□□□ -0.35
NEK3-205ENST00000610828 TREX2Q9BQ50 279 aaPredicted RBP12.88□□□□□ -0.35
NEK3-205ENST00000610828 P2RX2Q9UBL9 471 aa12.88□□□□□ -0.35
NEK3-205ENST00000610828 TRIOO75962 3097 aa12.88□□□□□ -0.35
NEK3-205ENST00000610828 ZNF99A8MXY4 864 aaPredicted RBP12.88□□□□□ -0.35
NEK3-205ENST00000610828 WBP4O75554 376 aaKnown RBP12.88□□□□□ -0.35
NEK3-205ENST00000610828 FEN1P39748 380 aaKnown RBP12.88□□□□□ -0.35
NEK3-205ENST00000610828 MAP2K4P45985 399 aa12.88□□□□□ -0.35
NEK3-205ENST00000610828 STT3AP46977 705 aa12.88□□□□□ -0.35
NEK3-205ENST00000610828 IDH2P48735 452 aaKnown RBP12.88□□□□□ -0.35
NEK3-205ENST00000610828 GP2P55259 537 aaKnown RBP12.88□□□□□ -0.35
NEK3-205ENST00000610828 LIM2P55344 173 aa12.88□□□□□ -0.35
NEK3-205ENST00000610828 STXBP1P61764 594 aaKnown RBP12.88□□□□□ -0.35
NEK3-205ENST00000610828 GPR19Q15760 415 aa12.88□□□□□ -0.35
NEK3-205ENST00000610828 EOGTQ5NDL2 527 aa12.88□□□□□ -0.35
NEK3-205ENST00000610828 P3H2Q8IVL5 708 aa12.88□□□□□ -0.35
NEK3-205ENST00000610828 KCT2Q8NC54 265 aa12.88□□□□□ -0.35
NEK3-205ENST00000610828 FLCNQ8NFG4 579 aa12.88□□□□□ -0.35
NEK3-205ENST00000610828 FAR1Q8WVX9 515 aa12.88□□□□□ -0.35
NEK3-205ENST00000610828 HMGB4Q8WW32 186 aa12.88□□□□□ -0.35
NEK3-205ENST00000610828 APH1BQ8WW43 257 aa12.88□□□□□ -0.35
NEK3-205ENST00000610828 GTPBP3Q969Y2 492 aaKnown RBP12.88□□□□□ -0.35
NEK3-205ENST00000610828 CNRIP1Q96F85 164 aaPredicted RBP12.88□□□□□ -0.35
NEK3-205ENST00000610828 COL21A1Q96P44 957 aa12.88□□□□□ -0.35
NEK3-205ENST00000610828 ALPK1Q96QP1 1244 aa12.88□□□□□ -0.35
NEK3-205ENST00000610828 ZNF607Q96SK3 696 aa12.88□□□□□ -0.35
NEK3-205ENST00000610828 YIPF4Q9BSR8 244 aa12.88□□□□□ -0.35
NEK3-205ENST00000610828 FUNDC2Q9BWH2 189 aa12.88□□□□□ -0.35
NEK3-205ENST00000610828 RSPO3Q9BXY4 272 aaPredicted RBP12.88□□□□□ -0.35
NEK3-205ENST00000610828 C8orf33Q9H7E9 229 aaPredicted RBP12.88□□□□□ -0.35
NEK3-205ENST00000610828 ZSCAN32Q9NX65 697 aa12.88□□□□□ -0.35
NEK3-205ENST00000610828 SEC14L3Q9UDX4 400 aa12.88□□□□□ -0.35
NEK3-205ENST00000610828 ENTPD4Q9Y227 616 aa12.88□□□□□ -0.35
NEK3-205ENST00000610828 RNF6Q9Y252 685 aa12.88□□□□□ -0.35
NEK3-205ENST00000610828 HCN4Q9Y3Q4 1203 aa12.88□□□□□ -0.35
NEK3-205ENST00000610828 PCDHGB1Q9Y5G3 927 aa12.88□□□□□ -0.35
NEK3-205ENST00000610828 PCDHGA10Q9Y5H3 936 aa12.88□□□□□ -0.35
NEK3-205ENST00000610828 PRAMEF27A3QJZ7 478 aa12.87□□□□□ -0.35
NEK3-205ENST00000610828 E9PQ18 207 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms