RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 ELFN1P0C7U0 828 aa19.4■□□□□ 0.7
SSBP3-216ENST00000610401 C8orf89P0DMQ9 161 aa19.4■□□□□ 0.7
SSBP3-216ENST00000610401 PRPH2P23942 346 aa19.4■□□□□ 0.7
SSBP3-216ENST00000610401 MYL9P24844 172 aa19.4■□□□□ 0.7
SSBP3-216ENST00000610401 ZNF750Q32MQ0 723 aa19.4■□□□□ 0.7
SSBP3-216ENST00000610401 ACSM5Q6NUN0 579 aa19.4■□□□□ 0.7
SSBP3-216ENST00000610401 TCTN3Q6NUS6 607 aa19.4■□□□□ 0.7
SSBP3-216ENST00000610401 PHC2Q8IXK0 858 aa19.4■□□□□ 0.7
SSBP3-216ENST00000610401 RAET1EQ8TD07 263 aa19.4■□□□□ 0.7
SSBP3-216ENST00000610401 C2orf15Q8WU43 125 aaKnown RBP19.4■□□□□ 0.7
SSBP3-216ENST00000610401 YME1L1Q96TA2 773 aa19.4■□□□□ 0.7
SSBP3-216ENST00000610401 OR2B2Q9GZK3 357 aa19.4■□□□□ 0.7
SSBP3-216ENST00000610401 ASF1AQ9Y294 204 aa19.4■□□□□ 0.7
SSBP3-216ENST00000610401 HEPACAM2A8MVW5 462 aa19.39■□□□□ 0.69
SSBP3-216ENST00000610401 TPD52L2O43399 206 aaKnown RBP19.39■□□□□ 0.69
SSBP3-216ENST00000610401 PRMT3O60678 531 aa19.39■□□□□ 0.69
SSBP3-216ENST00000610401 ATG13O75143 517 aa19.39■□□□□ 0.69
SSBP3-216ENST00000610401 PPIBP23284 216 aaKnown RBP19.39■□□□□ 0.69
SSBP3-216ENST00000610401 GINS1Q14691 196 aa19.39■□□□□ 0.69
SSBP3-216ENST00000610401 HEPACAMQ14CZ8 416 aa19.39■□□□□ 0.69
SSBP3-216ENST00000610401 LARS2Q15031 903 aaKnown RBP19.39■□□□□ 0.69
SSBP3-216ENST00000610401 PGBD3Q8N328 593 aa19.39■□□□□ 0.69
SSBP3-216ENST00000610401 CHCHD4Q8N4Q1 142 aa19.39■□□□□ 0.69
SSBP3-216ENST00000610401 TBX5Q99593 518 aa19.39■□□□□ 0.69
SSBP3-216ENST00000610401 TXNL4BQ9NX01 149 aaKnown RBP19.39■□□□□ 0.69
SSBP3-216ENST00000610401 HCFC2Q9Y5Z7 792 aa19.39■□□□□ 0.69
SSBP3-216ENST00000610401 ARID1BQ8NFD5 2236 aaPredicted RBP19.39■□□□□ 0.69
SSBP3-216ENST00000610401 SCN8AQ9UQD0 1980 aa19.39■□□□□ 0.69
SSBP3-216ENST00000610401 TEX28O15482 410 aa19.39■□□□□ 0.69
SSBP3-216ENST00000610401 LATO43561 262 aa19.39■□□□□ 0.69
SSBP3-216ENST00000610401 GPR37L1O60883 481 aa19.39■□□□□ 0.69
SSBP3-216ENST00000610401 ERAL1O75616 437 aaKnown RBP19.39■□□□□ 0.69
SSBP3-216ENST00000610401 RPLP2P05387 115 aaKnown RBP19.39■□□□□ 0.69
SSBP3-216ENST00000610401 MAPK8P45983 427 aa19.39■□□□□ 0.69
SSBP3-216ENST00000610401 SCN1BQ07699 218 aa19.39■□□□□ 0.69
SSBP3-216ENST00000610401 KRR1Q13601 381 aaKnown RBP19.39■□□□□ 0.69
SSBP3-216ENST00000610401 PPP2R2DQ66LE6 453 aa19.39■□□□□ 0.69
SSBP3-216ENST00000610401 OXR1Q8N573 874 aa19.39■□□□□ 0.69
SSBP3-216ENST00000610401 OR52P1PQ8NH57 321 aa19.39■□□□□ 0.69
SSBP3-216ENST00000610401 TCEAL4Q96EI5 215 aa19.39■□□□□ 0.69
SSBP3-216ENST00000610401 DCLRE1CQ96SD1 692 aaKnown RBP19.39■□□□□ 0.69
SSBP3-216ENST00000610401 RC3H2Q9HBD1 1191 aaKnown RBP19.39■□□□□ 0.69
SSBP3-216ENST00000610401 GPBP1L1Q9HC44 474 aaPredicted RBP19.39■□□□□ 0.69
SSBP3-216ENST00000610401 SPG21Q9NZD8 308 aa19.39■□□□□ 0.69
SSBP3-216ENST00000610401 COQ3Q9NZJ6 369 aa19.39■□□□□ 0.69
SSBP3-216ENST00000610401 CNIH4Q9P003 139 aa19.39■□□□□ 0.69
SSBP3-216ENST00000610401 CASKO14936 926 aa19.38■□□□□ 0.69
SSBP3-216ENST00000610401 SCG5P05408 212 aa19.38■□□□□ 0.69
SSBP3-216ENST00000610401 CSF3P09919 207 aa19.38■□□□□ 0.69
SSBP3-216ENST00000610401 C1DQ13901 141 aaKnown RBP19.38■□□□□ 0.69
SSBP3-216ENST00000610401 IL18Q14116 193 aa19.38■□□□□ 0.69
SSBP3-216ENST00000610401 REEP3Q6NUK4 255 aa19.38■□□□□ 0.69
SSBP3-216ENST00000610401 ZNF783Q6ZMS7 281 aa19.38■□□□□ 0.69
SSBP3-216ENST00000610401 MSANTD1Q6ZTZ1 278 aa19.38■□□□□ 0.69
SSBP3-216ENST00000610401 SLC30A8Q8IWU4 369 aa19.38■□□□□ 0.69
SSBP3-216ENST00000610401 GPA33Q99795 319 aa19.38■□□□□ 0.69
SSBP3-216ENST00000610401 SLC46A2Q9BY10 475 aa19.38■□□□□ 0.69
SSBP3-216ENST00000610401 IL21Q9HBE4 155 aa19.38■□□□□ 0.69
SSBP3-216ENST00000610401 DMRT3Q9NQL9 472 aa19.38■□□□□ 0.69
SSBP3-216ENST00000610401 NDRG2Q9UN36 371 aaKnown RBP19.38■□□□□ 0.69
SSBP3-216ENST00000610401 A0A0B4J293 547 aa19.38■□□□□ 0.69
SSBP3-216ENST00000610401 LOC102723532A0A0G2JNH3 316 aa19.38■□□□□ 0.69
SSBP3-216ENST00000610401 CAPN5O15484 640 aaPredicted RBP19.38■□□□□ 0.69
SSBP3-216ENST00000610401 MPC1LP0DKB6 136 aa19.38■□□□□ 0.69
SSBP3-216ENST00000610401 RHCEP18577 417 aa19.38■□□□□ 0.69
SSBP3-216ENST00000610401 CSTF2P33240 577 aaKnown RBP eCLIP19.38■□□□□ 0.69
SSBP3-216ENST00000610401 ATP6V1E1P36543 226 aa19.38■□□□□ 0.69
SSBP3-216ENST00000610401 PSPHP78330 225 aa19.38■□□□□ 0.69
SSBP3-216ENST00000610401 ASB18Q6ZVZ8 466 aa19.38■□□□□ 0.69
SSBP3-216ENST00000610401 AMER3Q8N944 861 aa19.38■□□□□ 0.69
SSBP3-216ENST00000610401 ZNF557Q8N988 423 aaPredicted RBP19.38■□□□□ 0.69
SSBP3-216ENST00000610401 RNF31Q96EP0 1072 aa19.38■□□□□ 0.69
SSBP3-216ENST00000610401 C11orf24Q96F05 449 aaPredicted RBP19.38■□□□□ 0.69
SSBP3-216ENST00000610401 ELAVL4P26378 380 aaKnown RBP19.38■□□□□ 0.69
SSBP3-216ENST00000610401 HTR2BP41595 481 aa19.38■□□□□ 0.69
SSBP3-216ENST00000610401 KIR2DL3P43628 341 aa19.38■□□□□ 0.69
SSBP3-216ENST00000610401 DGKGP49619 791 aa19.38■□□□□ 0.69
SSBP3-216ENST00000610401 EIF4HQ15056 248 aaKnown RBP19.38■□□□□ 0.69
SSBP3-216ENST00000610401 ZNF697Q5TEC3 545 aa19.38■□□□□ 0.69
SSBP3-216ENST00000610401 KIAA1161Q6NSJ0 714 aa19.38■□□□□ 0.69
SSBP3-216ENST00000610401 IL20RBQ6UXL0 311 aa19.38■□□□□ 0.69
SSBP3-216ENST00000610401 Q6ZNB5 142 aa19.38■□□□□ 0.69
SSBP3-216ENST00000610401 KRT73Q86Y46 540 aa19.38■□□□□ 0.69
SSBP3-216ENST00000610401 FIBINQ8TAL6 211 aa19.38■□□□□ 0.69
SSBP3-216ENST00000610401 CDCA4Q9BXL8 241 aa19.38■□□□□ 0.69
SSBP3-216ENST00000610401 SRRQ9GZT4 340 aa19.38■□□□□ 0.69
SSBP3-216ENST00000610401 MIXL1Q9H2W2 232 aa19.38■□□□□ 0.69
SSBP3-216ENST00000610401 HPGDSO60760 199 aa19.37■□□□□ 0.69
SSBP3-216ENST00000610401 ARHGEF15O94989 841 aa19.37■□□□□ 0.69
SSBP3-216ENST00000610401 H1F0P07305 194 aaKnown RBP19.37■□□□□ 0.69
SSBP3-216ENST00000610401 AVPR1BP47901 424 aa19.37■□□□□ 0.69
SSBP3-216ENST00000610401 INPP1P49441 399 aa19.37■□□□□ 0.69
SSBP3-216ENST00000610401 MAPK12P53778 367 aa19.37■□□□□ 0.69
SSBP3-216ENST00000610401 LRRC32Q14392 662 aa19.37■□□□□ 0.69
SSBP3-216ENST00000610401 CDK10Q15131 360 aa19.37■□□□□ 0.69
SSBP3-216ENST00000610401 NDUFA5Q16718 116 aa19.37■□□□□ 0.69
SSBP3-216ENST00000610401 TMEM215Q68D42 235 aa19.37■□□□□ 0.69
SSBP3-216ENST00000610401 RAD9AQ99638 391 aa19.37■□□□□ 0.69
SSBP3-216ENST00000610401 MAPKAP1Q9BPZ7 522 aa19.37■□□□□ 0.69
SSBP3-216ENST00000610401 WACQ9BTA9 647 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms