RNA–Protein interactions for RNA: ENST00000608532.1

HDDC2-207, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 553 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-207ENST00000608532 GVQW1Q8N7I0 195 aa3.13□□□□□ -1.91
HDDC2-207ENST00000608532 MR1Q95460 341 aa3.13□□□□□ -1.91
HDDC2-207ENST00000608532 ULK4Q96C45 1275 aa3.13□□□□□ -1.91
HDDC2-207ENST00000608532 RAB3CQ96E17 227 aa3.13□□□□□ -1.91
HDDC2-207ENST00000608532 WWP1Q9H0M0 922 aa3.13□□□□□ -1.91
HDDC2-207ENST00000608532 RNF41Q9H4P4 317 aaPredicted RBP3.13□□□□□ -1.91
HDDC2-207ENST00000608532 AMBNQ9NP70 447 aa3.13□□□□□ -1.91
HDDC2-207ENST00000608532 PSORS1C1Q9UIG5 152 aa3.13□□□□□ -1.91
HDDC2-207ENST00000608532 KLF2Q9Y5W3 355 aaPredicted RBP3.13□□□□□ -1.91
HDDC2-207ENST00000608532 FAM220BPB1ANY3 271 aa3.12□□□□□ -1.91
HDDC2-207ENST00000608532 K7ERI5 159 aa3.12□□□□□ -1.91
HDDC2-207ENST00000608532 RTL8CO15255 209 aa3.12□□□□□ -1.91
HDDC2-207ENST00000608532 TSC22D2O75157 780 aa3.12□□□□□ -1.91
HDDC2-207ENST00000608532 NME6O75414 186 aaPredicted RBP3.12□□□□□ -1.91
HDDC2-207ENST00000608532 CSDE1O75534 798 aaKnown RBP3.12□□□□□ -1.91
HDDC2-207ENST00000608532 C8orf89P0DMQ9 161 aa3.12□□□□□ -1.91
HDDC2-207ENST00000608532 GLRA1P23415 457 aa3.12□□□□□ -1.91
HDDC2-207ENST00000608532 MDH2P40926 338 aaKnown RBP3.12□□□□□ -1.91
HDDC2-207ENST00000608532 MAGEA9P43362 315 aa3.12□□□□□ -1.91
HDDC2-207ENST00000608532 MTIF2P46199 727 aaKnown RBP3.12□□□□□ -1.91
HDDC2-207ENST00000608532 SLC34A1Q06495 639 aa3.12□□□□□ -1.91
HDDC2-207ENST00000608532 PPP1R3AQ16821 1122 aa3.12□□□□□ -1.91
HDDC2-207ENST00000608532 UNC50Q53HI1 259 aa3.12□□□□□ -1.91
HDDC2-207ENST00000608532 CCDC158Q5M9N0 1113 aa3.12□□□□□ -1.91
HDDC2-207ENST00000608532 LRRC38Q5VT99 294 aa3.12□□□□□ -1.91
HDDC2-207ENST00000608532 Q6ZRG5 221 aa3.12□□□□□ -1.91
HDDC2-207ENST00000608532 OTOAQ7RTW8 1153 aa3.12□□□□□ -1.91
HDDC2-207ENST00000608532 VSIG1Q86XK7 387 aa3.12□□□□□ -1.91
HDDC2-207ENST00000608532 TUSC5Q8IXB3 177 aa3.12□□□□□ -1.91
HDDC2-207ENST00000608532 KLHDC8AQ8IYD2 350 aa3.12□□□□□ -1.91
HDDC2-207ENST00000608532 FBXW8Q8N3Y1 598 aa3.12□□□□□ -1.91
HDDC2-207ENST00000608532 ARL14Q8N4G2 192 aa3.12□□□□□ -1.91
HDDC2-207ENST00000608532 TRPV3Q8NET8 790 aa3.12□□□□□ -1.91
HDDC2-207ENST00000608532 SNRNP27Q8WVK2 155 aaKnown RBP3.12□□□□□ -1.91
HDDC2-207ENST00000608532 CXXC4Q9H2H0 198 aa3.12□□□□□ -1.91
HDDC2-207ENST00000608532 TNMDQ9H2S6 317 aa3.12□□□□□ -1.91
HDDC2-207ENST00000608532 TERF2IPQ9NYB0 399 aa3.12□□□□□ -1.91
HDDC2-207ENST00000608532 SEC14L4Q9UDX3 406 aa3.12□□□□□ -1.91
HDDC2-207ENST00000608532 FBXL5Q9UKA1 691 aa3.12□□□□□ -1.91
HDDC2-207ENST00000608532 ITM2BQ9Y287 266 aa3.12□□□□□ -1.91
HDDC2-207ENST00000608532 KIAA1217Q5T5P2 1943 aa3.11□□□□□ -1.91
HDDC2-207ENST00000608532 OOEPA6NGQ2 149 aa3.11□□□□□ -1.91
HDDC2-207ENST00000608532 TIMM44O43615 452 aa3.11□□□□□ -1.91
HDDC2-207ENST00000608532 PDGFBP01127 241 aaPredicted RBP3.11□□□□□ -1.91
HDDC2-207ENST00000608532 GH1P01241 217 aa3.11□□□□□ -1.91
HDDC2-207ENST00000608532 SCG2P13521 617 aa3.11□□□□□ -1.91
HDDC2-207ENST00000608532 PGAM2P15259 253 aa3.11□□□□□ -1.91
HDDC2-207ENST00000608532 RGRP47804 291 aa3.11□□□□□ -1.91
HDDC2-207ENST00000608532 MEOX2P50222 304 aa3.11□□□□□ -1.91
HDDC2-207ENST00000608532 HLCSP50747 726 aa3.11□□□□□ -1.91
HDDC2-207ENST00000608532 SLC25A1P53007 311 aa3.11□□□□□ -1.91
HDDC2-207ENST00000608532 KRTAP10-8P60410 259 aa3.11□□□□□ -1.91
HDDC2-207ENST00000608532 WDR25Q64LD2 544 aaPredicted RBP3.11□□□□□ -1.91
HDDC2-207ENST00000608532 TMED8Q6PL24 325 aaPredicted RBP3.11□□□□□ -1.91
HDDC2-207ENST00000608532 GLRX5Q86SX6 157 aa3.11□□□□□ -1.91
HDDC2-207ENST00000608532 HOOK3Q86VS8 718 aa3.11□□□□□ -1.91
HDDC2-207ENST00000608532 C17orf64Q86WR6 236 aa3.11□□□□□ -1.91
HDDC2-207ENST00000608532 CHDHQ8NE62 594 aaPredicted RBP3.11□□□□□ -1.91
HDDC2-207ENST00000608532 OR4F5Q8NH21 305 aa3.11□□□□□ -1.91
HDDC2-207ENST00000608532 VN1R17PQ8TDU5 208 aa3.11□□□□□ -1.91
HDDC2-207ENST00000608532 NUS1Q96E22 293 aa3.11□□□□□ -1.91
HDDC2-207ENST00000608532 SSX3Q99909 188 aa3.11□□□□□ -1.91
HDDC2-207ENST00000608532 AGPAT1Q99943 283 aa3.11□□□□□ -1.91
HDDC2-207ENST00000608532 TUFT1Q9NNX1 390 aa3.11□□□□□ -1.91
HDDC2-207ENST00000608532 GDF3Q9NR23 364 aa3.11□□□□□ -1.91
HDDC2-207ENST00000608532 TRABD2BA6NFA1 517 aa3.1□□□□□ -1.91
HDDC2-207ENST00000608532 SDR42E2A6NKP2 422 aa3.1□□□□□ -1.91
HDDC2-207ENST00000608532 EFCAB7A8K855 629 aa3.1□□□□□ -1.91
HDDC2-207ENST00000608532 CPA3P15088 417 aa3.1□□□□□ -1.91
HDDC2-207ENST00000608532 CXCL6P80162 114 aa3.1□□□□□ -1.91
HDDC2-207ENST00000608532 ARHGAP1Q07960 439 aa3.1□□□□□ -1.91
HDDC2-207ENST00000608532 MFGE8Q08431 387 aaPredicted RBP3.1□□□□□ -1.91
HDDC2-207ENST00000608532 CAPRIN1Q14444 709 aaKnown RBP3.1□□□□□ -1.91
HDDC2-207ENST00000608532 SLC10A1Q14973 349 aa3.1□□□□□ -1.91
HDDC2-207ENST00000608532 P2RY14Q15391 338 aa3.1□□□□□ -1.91
HDDC2-207ENST00000608532 C2orf83Q53S99 150 aa3.1□□□□□ -1.91
HDDC2-207ENST00000608532 NHSL2Q5HYW2 709 aa3.1□□□□□ -1.91
HDDC2-207ENST00000608532 FAM219BQ5XKK7 198 aa3.1□□□□□ -1.91
HDDC2-207ENST00000608532 ATAD1Q8NBU5 361 aa3.1□□□□□ -1.91
HDDC2-207ENST00000608532 RELL2Q8NC24 303 aaPredicted RBP3.1□□□□□ -1.91
HDDC2-207ENST00000608532 GGHQ92820 318 aa3.1□□□□□ -1.91
HDDC2-207ENST00000608532 SPATA17Q96L03 361 aa3.1□□□□□ -1.91
HDDC2-207ENST00000608532 CCT8L2Q96SF2 557 aa3.1□□□□□ -1.91
HDDC2-207ENST00000608532 TTYH2Q9BSA4 534 aa3.1□□□□□ -1.91
HDDC2-207ENST00000608532 VNN3Q9NY84 501 aa3.1□□□□□ -1.91
HDDC2-207ENST00000608532 ERVK-19Q9WJR5 959 aa3.1□□□□□ -1.91
HDDC2-207ENST00000608532 SH3PXD2BA1X283 911 aa3.09□□□□□ -1.91
HDDC2-207ENST00000608532 CDX4O14627 284 aaPredicted RBP3.09□□□□□ -1.91
HDDC2-207ENST00000608532 HDAC3O15379 428 aa3.09□□□□□ -1.91
HDDC2-207ENST00000608532 GLCEO94923 617 aa3.09□□□□□ -1.91
HDDC2-207ENST00000608532 PRAMEF12O95522 483 aa3.09□□□□□ -1.91
HDDC2-207ENST00000608532 GAS8O95995 478 aa3.09□□□□□ -1.91
HDDC2-207ENST00000608532 EPOP01588 193 aa3.09□□□□□ -1.91
HDDC2-207ENST00000608532 CD1EP15812 388 aa3.09□□□□□ -1.91
HDDC2-207ENST00000608532 FRKP42685 505 aaPredicted RBP3.09□□□□□ -1.91
HDDC2-207ENST00000608532 TNFRSF4P43489 277 aa3.09□□□□□ -1.91
HDDC2-207ENST00000608532 ARHGDIAP52565 204 aa3.09□□□□□ -1.91
HDDC2-207ENST00000608532 NDST1P52848 882 aa3.09□□□□□ -1.91
HDDC2-207ENST00000608532 MFAP2P55001 183 aa3.09□□□□□ -1.91
HDDC2-207ENST00000608532 PAX2Q02962 417 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms