RNA–Protein interactions for RNA: ENST00000604926.1

COL4A3BP-207, Transcript of collagen type IV alpha 3 binding protein, humanhuman

Gene COL4A3BP, Length 3,355 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-207ENST00000604926 UBA6A0AVT1 1052 aaPredicted RBP5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 CENPXA8MT69 81 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 J3QRK9 145 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 SLC22A5O76082 557 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 KDM4BO94953 1096 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 PPBPP02775 128 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 RPLP2P05387 115 aaKnown RBP5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 CHRM2P08172 466 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 HOXC4P09017 264 aaPredicted RBP5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 SPARCP09486 303 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 DRD4P21917 467 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 UBA1P22314 1058 aaKnown RBP5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 PRKCHP24723 683 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 CASRP41180 1078 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 RBM34P42696 430 aaKnown RBP5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 NDST1P52848 882 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 FMO1Q01740 532 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 OGDHQ02218 1023 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 PPP3CAQ08209 521 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 PTGR1Q14914 329 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 DUSP6Q16828 381 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 TMEM249Q2WGJ8 235 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 C3orf38Q5JPI3 329 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 C9orf50Q5SZB4 431 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 PRAMEF8Q5VWM4 474 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 MAP1SQ66K74 1059 aaPredicted RBP5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 RNF43Q68DV7 783 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 FOXP4Q8IVH2 680 aaPredicted RBP5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 FSTL5Q8N475 847 aaPredicted RBP5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 ZNF276Q8N554 614 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 PI4KAP1Q8N8J0 262 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 UXS1Q8NBZ7 420 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 OR4M2Q8NGB6 313 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 OR9K2Q8NGE7 335 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 OR2D3Q8NGH3 330 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 HAS1Q92839 578 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 DAZLQ92904 295 aaKnown RBP5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 TMEM186Q96B77 213 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 FBXL8Q96CD0 374 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 CPB2Q96IY4 423 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 ALKBH3Q96Q83 286 aaPredicted RBP5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 MYOCQ99972 504 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 SRSF8Q9BRL6 282 aaKnown RBP5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 WDR83Q9BRX9 315 aaKnown RBP5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 MTG2Q9H4K7 406 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 ANKRD19PQ9H560 264 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 TMEM185BQ9H7F4 350 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 ZNF556Q9HAH1 456 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 ZNF160Q9HCG1 818 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 SCUBE2Q9NQ36 999 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 ACOXLQ9NUZ1 547 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 TMLHEQ9NVH6 421 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 ZNF358Q9NW07 568 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 MRPL22Q9NWU5 206 aaKnown RBP5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 MIOSQ9NXC5 875 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 PLK2Q9NYY3 685 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 MAP10Q9P2G4 905 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 SLC23A1Q9UHI7 598 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 PRAMEF22A3QJZ6 481 aa5.53□□□□□ -1.52
COL4A3BP-207ENST00000604926 H7C2Y5 167 aa5.53□□□□□ -1.52
COL4A3BP-207ENST00000604926 OGG1O15527 345 aa5.53□□□□□ -1.52
COL4A3BP-207ENST00000604926 MATN4O95460 622 aa5.53□□□□□ -1.52
COL4A3BP-207ENST00000604926 ITGA4P13612 1032 aa5.53□□□□□ -1.52
COL4A3BP-207ENST00000604926 CYLC1P35663 651 aaPredicted RBP5.53□□□□□ -1.52
COL4A3BP-207ENST00000604926 MAGEA6P43360 314 aa5.53□□□□□ -1.52
COL4A3BP-207ENST00000604926 CXCR3P49682 368 aa5.53□□□□□ -1.52
COL4A3BP-207ENST00000604926 RPS15P62841 145 aaKnown RBP5.53□□□□□ -1.52
COL4A3BP-207ENST00000604926 CSNK2A1P68400 391 aaPredicted RBP5.53□□□□□ -1.52
COL4A3BP-207ENST00000604926 SLC34A1Q06495 639 aa5.53□□□□□ -1.52
COL4A3BP-207ENST00000604926 SREBF2Q12772 1141 aa5.53□□□□□ -1.52
COL4A3BP-207ENST00000604926 PCLAFQ15004 111 aa5.53□□□□□ -1.52
COL4A3BP-207ENST00000604926 SF1Q15637 639 aaKnown RBP5.53□□□□□ -1.52
COL4A3BP-207ENST00000604926 RNF151Q2KHN1 245 aa5.53□□□□□ -1.52
COL4A3BP-207ENST00000604926 AMZ1Q400G9 498 aa5.53□□□□□ -1.52
COL4A3BP-207ENST00000604926 GALNTL6Q49A17 601 aa5.53□□□□□ -1.52
COL4A3BP-207ENST00000604926 RAB41Q5JT25 222 aa5.53□□□□□ -1.52
COL4A3BP-207ENST00000604926 VASNQ6EMK4 673 aa5.53□□□□□ -1.52
COL4A3BP-207ENST00000604926 CHST9Q7L1S5 443 aa5.53□□□□□ -1.52
COL4A3BP-207ENST00000604926 SLC16A14Q7RTX9 510 aa5.53□□□□□ -1.52
COL4A3BP-207ENST00000604926 RASGEF1AQ8N9B8 481 aa5.53□□□□□ -1.52
COL4A3BP-207ENST00000604926 ZNF383Q8NA42 475 aa5.53□□□□□ -1.52
COL4A3BP-207ENST00000604926 CLEC1AQ8NC01 280 aa5.53□□□□□ -1.52
COL4A3BP-207ENST00000604926 CSNK2A3Q8NEV1 391 aa5.53□□□□□ -1.52
COL4A3BP-207ENST00000604926 ASB5Q8WWX0 329 aa5.53□□□□□ -1.52
COL4A3BP-207ENST00000604926 SLCO2A1Q92959 643 aa5.53□□□□□ -1.52
COL4A3BP-207ENST00000604926 ARRDC3Q96B67 414 aa5.53□□□□□ -1.52
COL4A3BP-207ENST00000604926 LCORQ96JN0 433 aaPredicted RBP5.53□□□□□ -1.52
COL4A3BP-207ENST00000604926 TCEAL7Q9BRU2 100 aa5.53□□□□□ -1.52
COL4A3BP-207ENST00000604926 MED10Q9BTT4 135 aa5.53□□□□□ -1.52
COL4A3BP-207ENST00000604926 ZNF768Q9H5H4 540 aaKnown RBP5.53□□□□□ -1.52
COL4A3BP-207ENST00000604926 CCDC134Q9H6E4 229 aa5.53□□□□□ -1.52
COL4A3BP-207ENST00000604926 LDAHQ9H6V9 325 aa5.53□□□□□ -1.52
COL4A3BP-207ENST00000604926 PAK6Q9NQU5 681 aaPredicted RBP5.53□□□□□ -1.52
COL4A3BP-207ENST00000604926 PLSCR3Q9NRY6 295 aa5.53□□□□□ -1.52
COL4A3BP-207ENST00000604926 FAM118AQ9NWS6 357 aa5.53□□□□□ -1.52
COL4A3BP-207ENST00000604926 URGCP-MRPS24S4R325 110 aa5.53□□□□□ -1.52
COL4A3BP-207ENST00000604926 SIGLEC6O43699 453 aa5.53□□□□□ -1.52
COL4A3BP-207ENST00000604926 SDC3O75056 442 aa5.53□□□□□ -1.52
COL4A3BP-207ENST00000604926 CREG1O75629 220 aa5.53□□□□□ -1.52
COL4A3BP-207ENST00000604926 OR2C1O95371 312 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms