RNA–Protein interactions for RNA: ENST00000600648.1

FARP1-231, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, human

TSL 5

Gene FARP1, Length 433 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FARP1-231	ENST00000600648	ALOX15	P16050	662 aa	Predicted RBP	19.93	■□□□□ 0.78
FARP1-231	ENST00000600648	PTX3	P26022	381 aa	Predicted RBP	19.93	■□□□□ 0.78
FARP1-231	ENST00000600648	PIGA	P37287	484 aa		19.93	■□□□□ 0.78
FARP1-231	ENST00000600648	BUD31	P41223	144 aa	Predicted RBP	19.93	■□□□□ 0.78
FARP1-231	ENST00000600648	HERVK_113	P63132	956 aa		19.93	■□□□□ 0.78
FARP1-231	ENST00000600648	ERVK-8	P63133	956 aa		19.93	■□□□□ 0.78
FARP1-231	ENST00000600648	PHEX	P78562	749 aa		19.93	■□□□□ 0.78
FARP1-231	ENST00000600648	ZNF267	Q14586	743 aa	Predicted RBP	19.93	■□□□□ 0.78
FARP1-231	ENST00000600648	PCBP2	Q15366	365 aa	Known RBP eCLIP	19.93	■□□□□ 0.78	2e-6	■■■■■ 27
FARP1-231	ENST00000600648	RGS9BP	Q6ZS82	235 aa		19.93	■□□□□ 0.78
FARP1-231	ENST00000600648	CCDC91	Q7Z6B0	441 aa		19.93	■□□□□ 0.78
FARP1-231	ENST00000600648	CCDC71	Q8IV32	467 aa	Predicted RBP	19.93	■□□□□ 0.78
FARP1-231	ENST00000600648	PLD6	Q8N2A8	252 aa	Known RBP	19.93	■□□□□ 0.78
FARP1-231	ENST00000600648	ZCCHC7	Q8N3Z6	543 aa	Known RBP	19.93	■□□□□ 0.78
FARP1-231	ENST00000600648	PTGR2	Q8N8N7	351 aa	Predicted RBP	19.93	■□□□□ 0.78
FARP1-231	ENST00000600648	GOLM1	Q8NBJ4	401 aa		19.93	■□□□□ 0.78
FARP1-231	ENST00000600648	UCN3	Q969E3	161 aa		19.93	■□□□□ 0.78
FARP1-231	ENST00000600648	CDK15	Q96Q40	435 aa		19.93	■□□□□ 0.78
FARP1-231	ENST00000600648	GAL3ST4	Q96RP7	486 aa		19.93	■□□□□ 0.78
FARP1-231	ENST00000600648	SMC6	Q96SB8	1091 aa		19.93	■□□□□ 0.78
FARP1-231	ENST00000600648	ERVK-6	Q9BXR3	956 aa		19.93	■□□□□ 0.78
FARP1-231	ENST00000600648	ZNF717	Q9BY31	904 aa	Predicted RBP	19.93	■□□□□ 0.78
FARP1-231	ENST00000600648	UCK2	Q9BZX2	261 aa		19.93	■□□□□ 0.78
FARP1-231	ENST00000600648	IL1RL2	Q9HB29	575 aa		19.93	■□□□□ 0.78
FARP1-231	ENST00000600648	SEMA4B	Q9NPR2	832 aa	Predicted RBP	19.93	■□□□□ 0.78
FARP1-231	ENST00000600648	PNPLA3	Q9NST1	481 aa		19.93	■□□□□ 0.78
FARP1-231	ENST00000600648	TUBA8	Q9NY65	449 aa	Predicted RBP	19.93	■□□□□ 0.78
FARP1-231	ENST00000600648	ERVK-19	Q9WJR5	959 aa		19.93	■□□□□ 0.78
FARP1-231	ENST00000600648	RNF6	Q9Y252	685 aa		19.93	■□□□□ 0.78
FARP1-231	ENST00000600648	DNAJC13	O75165	2243 aa		19.92	■□□□□ 0.78
FARP1-231	ENST00000600648	TEP1	Q99973	2627 aa	Known RBP	19.92	■□□□□ 0.78
FARP1-231	ENST00000600648	EML6	Q6ZMW3	1958 aa		19.92	■□□□□ 0.78
FARP1-231	ENST00000600648		A0A1W2PR48	441 aa		19.92	■□□□□ 0.78
FARP1-231	ENST00000600648	NKX2-6	A6NCS4	301 aa		19.92	■□□□□ 0.78
FARP1-231	ENST00000600648		H0YIV9	168 aa		19.92	■□□□□ 0.78
FARP1-231	ENST00000600648	PROM1	O43490	865 aa		19.92	■□□□□ 0.78
FARP1-231	ENST00000600648	KLK8	O60259	260 aa		19.92	■□□□□ 0.78
FARP1-231	ENST00000600648	GBA	P04062	536 aa		19.92	■□□□□ 0.78
FARP1-231	ENST00000600648	CELA3A	P09093	270 aa		19.92	■□□□□ 0.78
FARP1-231	ENST00000600648	PHB	P35232	272 aa		19.92	■□□□□ 0.78
FARP1-231	ENST00000600648	BSG	P35613	385 aa		19.92	■□□□□ 0.78
FARP1-231	ENST00000600648	PMPCA	Q10713	525 aa		19.92	■□□□□ 0.78
FARP1-231	ENST00000600648	MPEG1	Q2M385	716 aa		19.92	■□□□□ 0.78
FARP1-231	ENST00000600648	GXYLT1	Q4G148	440 aa		19.92	■□□□□ 0.78
FARP1-231	ENST00000600648	TECRL	Q5HYJ1	363 aa		19.92	■□□□□ 0.78
FARP1-231	ENST00000600648	NDUFAF5	Q5TEU4	345 aa		19.92	■□□□□ 0.78
FARP1-231	ENST00000600648	CYP20A1	Q6UW02	462 aa		19.92	■□□□□ 0.78
FARP1-231	ENST00000600648	FAM109A	Q8N4B1	249 aa		19.92	■□□□□ 0.78
FARP1-231	ENST00000600648	OR5M3	Q8NGP4	307 aa		19.92	■□□□□ 0.78
FARP1-231	ENST00000600648	NUBPL	Q8TB37	319 aa		19.92	■□□□□ 0.78
FARP1-231	ENST00000600648	RND1	Q92730	232 aa		19.92	■□□□□ 0.78
FARP1-231	ENST00000600648	REPS1	Q96D71	796 aa		19.92	■□□□□ 0.78
FARP1-231	ENST00000600648	PHF21B	Q96EK2	531 aa		19.92	■□□□□ 0.78
FARP1-231	ENST00000600648	FBXL20	Q96IG2	436 aa		19.92	■□□□□ 0.78
FARP1-231	ENST00000600648	SPOCK3	Q9BQ16	436 aa		19.92	■□□□□ 0.78
FARP1-231	ENST00000600648	NOL11	Q9H8H0	719 aa	Known RBP	19.92	■□□□□ 0.78
FARP1-231	ENST00000600648	ITGB1BP2	Q9UKP3	347 aa		19.92	■□□□□ 0.78
FARP1-231	ENST00000600648	ASB4	Q9Y574	426 aa		19.92	■□□□□ 0.78
FARP1-231	ENST00000600648	AKAP9	Q99996	3911 aa		19.92	■□□□□ 0.78
FARP1-231	ENST00000600648		A0A0A6YYD5	115 aa		19.91	■□□□□ 0.78
FARP1-231	ENST00000600648	IQANK1	A0A1B0GTG1	560 aa		19.91	■□□□□ 0.78
FARP1-231	ENST00000600648	NADK	O95544	446 aa	Predicted RBP	19.91	■□□□□ 0.78
FARP1-231	ENST00000600648	ACSL3	O95573	720 aa		19.91	■□□□□ 0.78
FARP1-231	ENST00000600648	GPR75	O95800	540 aa		19.91	■□□□□ 0.78
FARP1-231	ENST00000600648	FAM58BP	P0C7Q3	252 aa		19.91	■□□□□ 0.78
FARP1-231	ENST00000600648	NR2F6	P10588	404 aa		19.91	■□□□□ 0.78
FARP1-231	ENST00000600648	SSTR2	P30874	369 aa		19.91	■□□□□ 0.78
FARP1-231	ENST00000600648	NUP107	P57740	925 aa		19.91	■□□□□ 0.78
FARP1-231	ENST00000600648	KRTAP10-9	P60411	292 aa		19.91	■□□□□ 0.78
FARP1-231	ENST00000600648	FOXO1	Q12778	655 aa		19.91	■□□□□ 0.78
FARP1-231	ENST00000600648	PRAMEF20	Q5VT98	475 aa		19.91	■□□□□ 0.78
FARP1-231	ENST00000600648	ZNF585A	Q6P3V2	769 aa		19.91	■□□□□ 0.78
FARP1-231	ENST00000600648	TRIL	Q7L0X0	811 aa		19.91	■□□□□ 0.78
FARP1-231	ENST00000600648	ST13P4	Q8IZP2	240 aa	Predicted RBP	19.91	■□□□□ 0.78
FARP1-231	ENST00000600648	C7orf57	Q8NEG2	295 aa		19.91	■□□□□ 0.78
FARP1-231	ENST00000600648	SLC22A8	Q8TCC7	542 aa		19.91	■□□□□ 0.78
FARP1-231	ENST00000600648	CHTF18	Q8WVB6	975 aa		19.91	■□□□□ 0.78
FARP1-231	ENST00000600648	ASB5	Q8WWX0	329 aa		19.91	■□□□□ 0.78
FARP1-231	ENST00000600648	ATP6V1E2	Q96A05	226 aa		19.91	■□□□□ 0.78
FARP1-231	ENST00000600648	ART5	Q96L15	291 aa		19.91	■□□□□ 0.78
FARP1-231	ENST00000600648	ACSS3	Q9H6R3	686 aa		19.91	■□□□□ 0.78
FARP1-231	ENST00000600648	LYAR	Q9NX58	379 aa	Known RBP	19.91	■□□□□ 0.78
FARP1-231	ENST00000600648	TSC22D4	Q9Y3Q8	395 aa		19.91	■□□□□ 0.78
FARP1-231	ENST00000600648	TNPO3	Q9Y5L0	923 aa	Known RBP	19.91	■□□□□ 0.78
FARP1-231	ENST00000600648	CCDC189	A1A4V9	331 aa		19.9	■□□□□ 0.78
FARP1-231	ENST00000600648	URI1	O94763	535 aa	Predicted RBP	19.9	■□□□□ 0.78
FARP1-231	ENST00000600648	LRAT	O95237	230 aa		19.9	■□□□□ 0.78
FARP1-231	ENST00000600648	CLDN9	O95484	217 aa		19.9	■□□□□ 0.78
FARP1-231	ENST00000600648	AIFM1	O95831	613 aa		19.9	■□□□□ 0.78
FARP1-231	ENST00000600648	CHRNB4	P30926	498 aa		19.9	■□□□□ 0.78
FARP1-231	ENST00000600648	ZNF791	Q3KP31	576 aa	Predicted RBP	19.9	■□□□□ 0.78
FARP1-231	ENST00000600648	MRM1	Q6IN84	353 aa	Known RBP	19.9	■□□□□ 0.78
FARP1-231	ENST00000600648	SLC29A4	Q7RTT9	530 aa		19.9	■□□□□ 0.78
FARP1-231	ENST00000600648	L3MBTL4	Q8NA19	623 aa		19.9	■□□□□ 0.78
FARP1-231	ENST00000600648	FAM13C	Q8NE31	585 aa		19.9	■□□□□ 0.78
FARP1-231	ENST00000600648	OR52B6	Q8NGF0	335 aa		19.9	■□□□□ 0.78
FARP1-231	ENST00000600648	WDR20	Q8TBZ3	569 aa		19.9	■□□□□ 0.78
FARP1-231	ENST00000600648	RIT1	Q92963	219 aa		19.9	■□□□□ 0.78
FARP1-231	ENST00000600648	ENKD1	Q9H0I2	346 aa		19.9	■□□□□ 0.78
FARP1-231	ENST00000600648	LDAH	Q9H6V9	325 aa		19.9	■□□□□ 0.78

Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms