RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 WFDC6Q9BQY6 131 aa10.95□□□□□ -0.66
ARHGEF1-220ENST00000600274 CHCHD6Q9BRQ6 235 aa10.95□□□□□ -0.66
ARHGEF1-220ENST00000600274 MS4A8Q9BY19 250 aa10.95□□□□□ -0.66
ARHGEF1-220ENST00000600274 MS4A12Q9NXJ0 267 aa10.95□□□□□ -0.66
ARHGEF1-220ENST00000600274 DNAJC27Q9NZQ0 273 aa10.95□□□□□ -0.66
ARHGEF1-220ENST00000600274 KIAA1671Q9BY89 1806 aa10.95□□□□□ -0.66
ARHGEF1-220ENST00000600274 GSAPA4D1B5 854 aa10.95□□□□□ -0.66
ARHGEF1-220ENST00000600274 EPOPA6NHQ4 379 aa10.95□□□□□ -0.66
ARHGEF1-220ENST00000600274 PGRMC2O15173 223 aa10.95□□□□□ -0.66
ARHGEF1-220ENST00000600274 RGS5O15539 181 aa10.95□□□□□ -0.66
ARHGEF1-220ENST00000600274 RNGTTO60942 597 aaKnown RBP10.95□□□□□ -0.66
ARHGEF1-220ENST00000600274 CCDC159P0C7I6 412 aa10.95□□□□□ -0.66
ARHGEF1-220ENST00000600274 DDCP20711 480 aa10.95□□□□□ -0.66
ARHGEF1-220ENST00000600274 RPL3P39023 403 aaKnown RBP10.95□□□□□ -0.66
ARHGEF1-220ENST00000600274 ACTR1BP42025 376 aa10.95□□□□□ -0.66
ARHGEF1-220ENST00000600274 TMBIM6P55061 237 aa10.95□□□□□ -0.66
ARHGEF1-220ENST00000600274 ACTR1AP61163 376 aa10.95□□□□□ -0.66
ARHGEF1-220ENST00000600274 LSM11P83369 360 aaKnown RBP eCLIP10.95□□□□□ -0.663e-8■■■■■ 29.5
ARHGEF1-220ENST00000600274 ALDH6A1Q02252 535 aaKnown RBP10.95□□□□□ -0.66
ARHGEF1-220ENST00000600274 DPTQ07507 201 aa10.95□□□□□ -0.66
ARHGEF1-220ENST00000600274 MLF2Q15773 248 aaPredicted RBP10.95□□□□□ -0.66
ARHGEF1-220ENST00000600274 TMEM52BQ4KMG9 183 aa10.95□□□□□ -0.66
ARHGEF1-220ENST00000600274 C18orf63Q68DL7 685 aa10.95□□□□□ -0.66
ARHGEF1-220ENST00000600274 SDE2Q6IQ49 451 aa10.95□□□□□ -0.66
ARHGEF1-220ENST00000600274 LCTLQ6UWM7 567 aa10.95□□□□□ -0.66
ARHGEF1-220ENST00000600274 TSEN54Q7Z6J9 526 aaKnown RBP10.95□□□□□ -0.66
ARHGEF1-220ENST00000600274 ADAMTS16Q8TE57 1224 aa10.95□□□□□ -0.66
ARHGEF1-220ENST00000600274 ZHX1-C8orf76Q96EF9 292 aa10.95□□□□□ -0.66
ARHGEF1-220ENST00000600274 TEFMQ96QE5 360 aaKnown RBP10.95□□□□□ -0.66
ARHGEF1-220ENST00000600274 SLC17A9Q9BYT1 436 aa10.95□□□□□ -0.66
ARHGEF1-220ENST00000600274 EPHX3Q9H6B9 360 aa10.95□□□□□ -0.66
ARHGEF1-220ENST00000600274 PALMDQ9NP74 551 aa10.95□□□□□ -0.66
ARHGEF1-220ENST00000600274 GPC6Q9Y625 555 aaPredicted RBP10.95□□□□□ -0.66
ARHGEF1-220ENST00000600274 HEATR5BQ9P2D3 2071 aa10.95□□□□□ -0.66
ARHGEF1-220ENST00000600274 C17orf113A0A1B0GUU1 675 aa10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 TRIM64CA6NLI5 447 aa10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 WBP4O75554 376 aaKnown RBP10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 CYP7B1O75881 506 aa10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 KLHL18O94889 574 aa10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 GASTP01350 101 aa10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 ITGAMP11215 1152 aa10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 HOXB2P14652 356 aa10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 RYKP34925 604 aa10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 HOXD12P35452 270 aa10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 PIK3CBP42338 1070 aa10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 TARDBPQ13148 414 aaKnown RBP eCLIP10.94□□□□□ -0.666e-8■■■■■ 52.5
ARHGEF1-220ENST00000600274 ADPRMQ3LIE5 342 aa10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 ITPRIPL2Q3MIP1 535 aa10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 TJAP1Q5JTD0 557 aa10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 TSPYL5Q86VY4 417 aaPredicted RBP10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 OR52E4Q8NGH9 312 aa10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 LCN9Q8WX39 176 aa10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 OR51I1Q9H343 314 aa10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 FGF22Q9HCT0 170 aa10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 CDH7Q9ULB5 785 aa10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 A8MV72 311 aaPredicted RBP10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 CACNB4O00305 520 aaPredicted RBP10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 BTN3A3O00478 584 aa10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 HAT1O14929 419 aa10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 CKMT1AP12532 417 aa10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 UQCRC2P22695 453 aa10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 IDUAP35475 653 aa10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 PPP2CBP62714 309 aa10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 PPP2CAP67775 309 aa10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 CSNK1G2P78368 415 aa10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 SLC35A2P78381 396 aa10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 MLLT1Q03111 559 aaPredicted RBP10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 ZNF630Q2M218 657 aaPredicted RBP10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 TOR1AIP1Q5JTV8 583 aa10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 COLEC12Q5KU26 742 aa10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 ATAT1Q5SQI0 421 aa10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 SETD7Q8WTS6 366 aaKnown RBP10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 ZBED6CLQ96FA7 236 aaPredicted RBP10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 C16orf58Q96GQ5 468 aa10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 SLC35G5Q96KT7 338 aa10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 ALOXE3Q9BYJ1 711 aa10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 ZBTB20Q9HC78 741 aaPredicted RBP10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 POU2F3Q9UKI9 436 aa10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 NDRG4Q9ULP0 352 aaKnown RBP10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 SERPINB7O75635 380 aa10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 KLF8O95600 359 aaPredicted RBP10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 TBX6O95947 436 aaPredicted RBP10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 ITGA2P17301 1181 aa10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 CNR2P34972 360 aa10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 BSGP35613 385 aa10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 SERPINB10P48595 397 aa10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 CRISP3P54108 245 aa10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 BTN3A2P78410 334 aa10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 FCHO2Q0JRZ9 810 aa10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 DBPQ10586 325 aaPredicted RBP10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 ST3GAL4Q11206 333 aa10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 ZNF846Q147U1 533 aa10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 RSBN1Q5VWQ0 802 aaPredicted RBP10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 GTF2IRD2BQ6EKJ0 949 aa10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 GTF2IRD2Q86UP8 949 aa10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 KLHDC8AQ8IYD2 350 aa10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 SVOPQ8N4V2 548 aa10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 PHOSPHO2Q8TCD6 241 aa10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 RNF31Q96EP0 1072 aa10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 PDXPQ96GD0 296 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms