RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 SLC35E2P0CK97 266 aa15.56■□□□□ 0.08
SSBP4-204ENST00000597724 UROSP10746 265 aa15.56■□□□□ 0.08
SSBP4-204ENST00000597724 TRHRP34981 398 aaPredicted RBP15.56■□□□□ 0.08
SSBP4-204ENST00000597724 RAE1P78406 368 aaKnown RBP15.56■□□□□ 0.08
SSBP4-204ENST00000597724 SPIN4Q56A73 249 aa15.56■□□□□ 0.08
SSBP4-204ENST00000597724 TNFAIP8L3Q5GJ75 292 aa15.56■□□□□ 0.08
SSBP4-204ENST00000597724 CEP85LQ5SZL2 805 aa15.56■□□□□ 0.08
SSBP4-204ENST00000597724 SPINK14Q6IE38 97 aa15.56■□□□□ 0.08
SSBP4-204ENST00000597724 HSDL2Q6YN16 418 aa15.56■□□□□ 0.08
SSBP4-204ENST00000597724 TRIM46Q7Z4K8 759 aa15.56■□□□□ 0.08
SSBP4-204ENST00000597724 EXOC3L1Q86VI1 746 aa15.56■□□□□ 0.08
SSBP4-204ENST00000597724 GRHL3Q8TE85 626 aa15.56■□□□□ 0.08
SSBP4-204ENST00000597724 ZNF721Q8TF20 911 aa15.56■□□□□ 0.08
SSBP4-204ENST00000597724 APIPQ96GX9 242 aa15.56■□□□□ 0.08
SSBP4-204ENST00000597724 FBXL20Q96IG2 436 aa15.56■□□□□ 0.08
SSBP4-204ENST00000597724 PELOQ9BRX2 385 aaKnown RBP15.56■□□□□ 0.08
SSBP4-204ENST00000597724 TRIM45Q9H8W5 580 aaPredicted RBP15.56■□□□□ 0.08
SSBP4-204ENST00000597724 AGPAT4Q9NRZ5 378 aa15.56■□□□□ 0.08
SSBP4-204ENST00000597724 CES1P1Q9UKY3 287 aa15.56■□□□□ 0.08
SSBP4-204ENST00000597724 PCDHA9Q9Y5H5 950 aa15.56■□□□□ 0.08
SSBP4-204ENST00000597724 C1orf226A1L170 272 aa15.55■□□□□ 0.08
SSBP4-204ENST00000597724 TCP11X1B4DZS4 312 aa15.55■□□□□ 0.08
SSBP4-204ENST00000597724 FCHO1O14526 889 aa15.55■□□□□ 0.08
SSBP4-204ENST00000597724 CTIFO43310 598 aaKnown RBP15.55■□□□□ 0.08
SSBP4-204ENST00000597724 DYRK3O43781 588 aa15.55■□□□□ 0.08
SSBP4-204ENST00000597724 CRCPO75575 148 aa15.55■□□□□ 0.08
SSBP4-204ENST00000597724 ITGA10O75578 1167 aa15.55■□□□□ 0.08
SSBP4-204ENST00000597724 NEURL1O76050 574 aa15.55■□□□□ 0.08
SSBP4-204ENST00000597724 IGKV3-11P04433 115 aa15.55■□□□□ 0.08
SSBP4-204ENST00000597724 PIK3R1P27986 724 aa15.55■□□□□ 0.08
SSBP4-204ENST00000597724 GALNSP34059 522 aa15.55■□□□□ 0.08
SSBP4-204ENST00000597724 ETV4P43268 484 aa15.55■□□□□ 0.08
SSBP4-204ENST00000597724 CYB561P49447 251 aa15.55■□□□□ 0.08
SSBP4-204ENST00000597724 HLCSP50747 726 aa15.55■□□□□ 0.08
SSBP4-204ENST00000597724 OC90Q02509 493 aaPredicted RBP15.55■□□□□ 0.08
SSBP4-204ENST00000597724 ACSM2AQ08AH3 577 aa15.55■□□□□ 0.08
SSBP4-204ENST00000597724 OR1C1Q15619 314 aa15.55■□□□□ 0.08
SSBP4-204ENST00000597724 INAQ16352 499 aa15.55■□□□□ 0.08
SSBP4-204ENST00000597724 SPRED3Q2MJR0 410 aa15.55■□□□□ 0.08
SSBP4-204ENST00000597724 ZNF766Q5HY98 468 aa15.55■□□□□ 0.08
SSBP4-204ENST00000597724 ACSM2BQ68CK6 577 aa15.55■□□□□ 0.08
SSBP4-204ENST00000597724 CLEC6AQ6EIG7 209 aa15.55■□□□□ 0.08
SSBP4-204ENST00000597724 SLC48A1Q6P1K1 146 aa15.55■□□□□ 0.08
SSBP4-204ENST00000597724 GALNT18Q6P9A2 607 aa15.55■□□□□ 0.08
SSBP4-204ENST00000597724 LRIG3Q6UXM1 1119 aa15.55■□□□□ 0.08
SSBP4-204ENST00000597724 CROCCP2Q86T23 111 aa15.55■□□□□ 0.08
SSBP4-204ENST00000597724 ZNF227Q86WZ6 799 aa15.55■□□□□ 0.08
SSBP4-204ENST00000597724 HORMAD2Q8N7B1 307 aa15.55■□□□□ 0.08
SSBP4-204ENST00000597724 OR4K14Q8NGD5 310 aa15.55■□□□□ 0.08
SSBP4-204ENST00000597724 OR8K3Q8NH51 312 aa15.55■□□□□ 0.08
SSBP4-204ENST00000597724 FAR1Q8WVX9 515 aa15.55■□□□□ 0.08
SSBP4-204ENST00000597724 TAAR6Q96RI8 345 aa15.55■□□□□ 0.08
SSBP4-204ENST00000597724 SSU72Q9NP77 194 aaKnown RBP15.55■□□□□ 0.08
SSBP4-204ENST00000597724 SIRT5Q9NXA8 310 aa15.55■□□□□ 0.08
SSBP4-204ENST00000597724 LRFN1Q9P244 771 aa15.55■□□□□ 0.08
SSBP4-204ENST00000597724 COPS7AQ9UBW8 275 aa15.55■□□□□ 0.08
SSBP4-204ENST00000597724 YARS2Q9Y2Z4 477 aaKnown RBP15.55■□□□□ 0.08
SSBP4-204ENST00000597724 COL12A1Q99715 3063 aa15.55■□□□□ 0.08
SSBP4-204ENST00000597724 A0A1W2PS29 197 aa15.54■□□□□ 0.08
SSBP4-204ENST00000597724 HRKO00198 91 aa15.54■□□□□ 0.08
SSBP4-204ENST00000597724 AZIN1O14977 448 aa15.54■□□□□ 0.08
SSBP4-204ENST00000597724 OR10H2O60403 315 aa15.54■□□□□ 0.08
SSBP4-204ENST00000597724 NPHS1O60500 1241 aa15.54■□□□□ 0.08
SSBP4-204ENST00000597724 CBX6O95503 412 aa15.54■□□□□ 0.08
SSBP4-204ENST00000597724 BPGMP07738 259 aa15.54■□□□□ 0.08
SSBP4-204ENST00000597724 GNLYP22749 145 aa15.54■□□□□ 0.08
SSBP4-204ENST00000597724 UQCRFS1P47985 274 aa15.54■□□□□ 0.08
SSBP4-204ENST00000597724 XKP51811 444 aa15.54■□□□□ 0.08
SSBP4-204ENST00000597724 RNF4P78317 190 aa15.54■□□□□ 0.08
SSBP4-204ENST00000597724 BTKQ06187 659 aa15.54■□□□□ 0.08
SSBP4-204ENST00000597724 FAM180AQ6UWF9 173 aa15.54■□□□□ 0.08
SSBP4-204ENST00000597724 C16orf47Q6ZP98 133 aaPredicted RBP15.54■□□□□ 0.08
SSBP4-204ENST00000597724 MMP21Q8N119 569 aa15.54■□□□□ 0.08
SSBP4-204ENST00000597724 RIT1Q92963 219 aa15.54■□□□□ 0.08
SSBP4-204ENST00000597724 ZBTB9Q96C00 473 aa15.54■□□□□ 0.08
SSBP4-204ENST00000597724 PGM2Q96G03 612 aa15.54■□□□□ 0.08
SSBP4-204ENST00000597724 SCMH1Q96GD3 660 aa15.54■□□□□ 0.08
SSBP4-204ENST00000597724 ART5Q96L15 291 aa15.54■□□□□ 0.08
SSBP4-204ENST00000597724 HES7Q9BYE0 225 aa15.54■□□□□ 0.08
SSBP4-204ENST00000597724 CENPHQ9H3R5 247 aa15.54■□□□□ 0.08
SSBP4-204ENST00000597724 LIN28AQ9H9Z2 209 aaKnown RBP15.54■□□□□ 0.08
SSBP4-204ENST00000597724 MYOTQ9UBF9 498 aa15.54■□□□□ 0.08
SSBP4-204ENST00000597724 CCL27Q9Y4X3 112 aa15.54■□□□□ 0.08
SSBP4-204ENST00000597724 GNG14A0A1W2PPG7 69 aa15.53■□□□□ 0.08
SSBP4-204ENST00000597724 PCDH7O60245 1069 aa15.53■□□□□ 0.08
SSBP4-204ENST00000597724 OR2J2O76002 312 aa15.53■□□□□ 0.08
SSBP4-204ENST00000597724 RASAL1O95294 804 aa15.53■□□□□ 0.08
SSBP4-204ENST00000597724 CHRNGP07510 517 aa15.53■□□□□ 0.08
SSBP4-204ENST00000597724 SP1P08047 785 aa15.53■□□□□ 0.08
SSBP4-204ENST00000597724 FGF4P08620 206 aa15.53■□□□□ 0.08
SSBP4-204ENST00000597724 CD46P15529 392 aa15.53■□□□□ 0.08
SSBP4-204ENST00000597724 TIA1P31483 386 aaKnown RBP eCLIP15.53■□□□□ 0.08
SSBP4-204ENST00000597724 HK2P52789 917 aa15.53■□□□□ 0.08
SSBP4-204ENST00000597724 ZNF267Q14586 743 aaPredicted RBP15.53■□□□□ 0.08
SSBP4-204ENST00000597724 NR6A1Q15406 480 aa15.53■□□□□ 0.08
SSBP4-204ENST00000597724 IMPG1Q17R60 797 aa15.53■□□□□ 0.08
SSBP4-204ENST00000597724 ZNF750Q32MQ0 723 aa15.53■□□□□ 0.08
SSBP4-204ENST00000597724 ARL13AQ5H913 290 aaPredicted RBP15.53■□□□□ 0.08
SSBP4-204ENST00000597724 SPDYAQ5MJ70 313 aa15.53■□□□□ 0.08
SSBP4-204ENST00000597724 BEND6Q5SZJ8 279 aaPredicted RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms