RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 CYR61O00622 381 aa14.07□□□□□ -0.16
TRIM28-207ENST00000597136 SLC22A2O15244 555 aa14.07□□□□□ -0.16
TRIM28-207ENST00000597136 PROM1O43490 865 aa14.07□□□□□ -0.16
TRIM28-207ENST00000597136 AKAP10O43572 662 aa14.07□□□□□ -0.16
TRIM28-207ENST00000597136 DNAJB5O75953 348 aa14.07□□□□□ -0.16
TRIM28-207ENST00000597136 LRATO95237 230 aa14.07□□□□□ -0.16
TRIM28-207ENST00000597136 IL3P08700 152 aa14.07□□□□□ -0.16
TRIM28-207ENST00000597136 PRPS1L1P21108 318 aa14.07□□□□□ -0.16
TRIM28-207ENST00000597136 MAOAP21397 527 aa14.07□□□□□ -0.16
TRIM28-207ENST00000597136 IL12AP29459 219 aa14.07□□□□□ -0.16
TRIM28-207ENST00000597136 C21orf58P58505 322 aa14.07□□□□□ -0.16
TRIM28-207ENST00000597136 AGKQ53H12 422 aa14.07□□□□□ -0.16
TRIM28-207ENST00000597136 PCSK4Q6UW60 755 aa14.07□□□□□ -0.16
TRIM28-207ENST00000597136 IKBIPQ70UQ0 350 aa14.07□□□□□ -0.16
TRIM28-207ENST00000597136 TRPM8Q7Z2W7 1104 aa14.07□□□□□ -0.16
TRIM28-207ENST00000597136 GPR180Q86V85 440 aa14.07□□□□□ -0.16
TRIM28-207ENST00000597136 RAB43Q86YS6 212 aa14.07□□□□□ -0.16
TRIM28-207ENST00000597136 TMEM132CQ8N3T6 1108 aa14.07□□□□□ -0.16
TRIM28-207ENST00000597136 OR11G2Q8NGC1 345 aa14.07□□□□□ -0.16
TRIM28-207ENST00000597136 OR9I1Q8NGQ6 314 aa14.07□□□□□ -0.16
TRIM28-207ENST00000597136 TSLPQ969D9 159 aa14.07□□□□□ -0.16
TRIM28-207ENST00000597136 GFM2Q969S9 779 aaKnown RBP14.07□□□□□ -0.16
TRIM28-207ENST00000597136 OR1F2PQ96R84 312 aa14.07□□□□□ -0.16
TRIM28-207ENST00000597136 CLK4Q9HAZ1 481 aaKnown RBP14.07□□□□□ -0.16
TRIM28-207ENST00000597136 NECTIN3Q9NQS3 549 aa14.07□□□□□ -0.16
TRIM28-207ENST00000597136 TMEM45AQ9NWC5 275 aa14.07□□□□□ -0.16
TRIM28-207ENST00000597136 TEX10Q9NXF1 929 aaPredicted RBP14.07□□□□□ -0.16
TRIM28-207ENST00000597136 EXO1Q9UQ84 846 aaKnown RBP14.07□□□□□ -0.16
TRIM28-207ENST00000597136 MAN2B2Q9Y2E5 1009 aa14.07□□□□□ -0.16
TRIM28-207ENST00000597136 ATG4BQ9Y4P1 393 aa14.07□□□□□ -0.16
TRIM28-207ENST00000597136 CAPN7Q9Y6W3 813 aa14.07□□□□□ -0.16
TRIM28-207ENST00000597136 CFAP46Q8IYW2 2715 aa14.06□□□□□ -0.16
TRIM28-207ENST00000597136 BSNQ9UPA5 3926 aa14.06□□□□□ -0.16
TRIM28-207ENST00000597136 IGHV3-20A0A0C4DH32 117 aa14.06□□□□□ -0.16
TRIM28-207ENST00000597136 A0A1W2PR48 441 aa14.06□□□□□ -0.16
TRIM28-207ENST00000597136 TGFBR3LH3BV60 316 aa14.06□□□□□ -0.16
TRIM28-207ENST00000597136 PRMT3O60678 531 aa14.06□□□□□ -0.16
TRIM28-207ENST00000597136 GUCY1B2O75343 617 aa14.06□□□□□ -0.16
TRIM28-207ENST00000597136 PRKRAO75569 313 aaKnown RBP14.06□□□□□ -0.16
TRIM28-207ENST00000597136 CD1EP15812 388 aa14.06□□□□□ -0.16
TRIM28-207ENST00000597136 PIK3R1P27986 724 aa14.06□□□□□ -0.16
TRIM28-207ENST00000597136 ZFP36L2P47974 494 aaKnown RBP14.06□□□□□ -0.16
TRIM28-207ENST00000597136 RAB38P57729 211 aa14.06□□□□□ -0.16
TRIM28-207ENST00000597136 C2orf80Q0P641 193 aa14.06□□□□□ -0.16
TRIM28-207ENST00000597136 FAM91A1Q658Y4 838 aa14.06□□□□□ -0.16
TRIM28-207ENST00000597136 C18orf63Q68DL7 685 aa14.06□□□□□ -0.16
TRIM28-207ENST00000597136 TMEM205Q6UW68 189 aa14.06□□□□□ -0.16
TRIM28-207ENST00000597136 TREML1Q86YW5 311 aa14.06□□□□□ -0.16
TRIM28-207ENST00000597136 FUNDC1Q8IVP5 155 aa14.06□□□□□ -0.16
TRIM28-207ENST00000597136 MMP21Q8N119 569 aa14.06□□□□□ -0.16
TRIM28-207ENST00000597136 PLPP5Q8NEB5 264 aa14.06□□□□□ -0.16
TRIM28-207ENST00000597136 NUDT8Q8WV74 236 aa14.06□□□□□ -0.16
TRIM28-207ENST00000597136 THAP4Q8WY91 577 aa14.06□□□□□ -0.16
TRIM28-207ENST00000597136 PTCHD1Q96NR3 888 aa14.06□□□□□ -0.16
TRIM28-207ENST00000597136 CCDC167Q9P0B6 97 aa14.06□□□□□ -0.16
TRIM28-207ENST00000597136 PHF11Q9UIL8 331 aa14.06□□□□□ -0.16
TRIM28-207ENST00000597136 FBXL4Q9UKA2 621 aa14.06□□□□□ -0.16
TRIM28-207ENST00000597136 SMG1Q96Q15 3661 aaKnown RBP14.06□□□□□ -0.16
TRIM28-207ENST00000597136 CCT8L1PA6NM43 557 aa14.05□□□□□ -0.16
TRIM28-207ENST00000597136 C9JVG2 144 aa14.05□□□□□ -0.16
TRIM28-207ENST00000597136 IGHEP01854 428 aa14.05□□□□□ -0.16
TRIM28-207ENST00000597136 IL10P22301 178 aa14.05□□□□□ -0.16
TRIM28-207ENST00000597136 CLNS1AP54105 237 aaKnown RBP14.05□□□□□ -0.16
TRIM28-207ENST00000597136 EEF1A2Q05639 463 aaKnown RBP14.05□□□□□ -0.16
TRIM28-207ENST00000597136 NSDHLQ15738 373 aa14.05□□□□□ -0.16
TRIM28-207ENST00000597136 NDUFAF5Q5TEU4 345 aa14.05□□□□□ -0.16
TRIM28-207ENST00000597136 BORAQ6PGQ7 559 aa14.05□□□□□ -0.16
TRIM28-207ENST00000597136 C6orf89Q6UWU4 347 aa14.05□□□□□ -0.16
TRIM28-207ENST00000597136 EFCAB3Q8N7B9 438 aa14.05□□□□□ -0.16
TRIM28-207ENST00000597136 ZBTB18Q99592 522 aa14.05□□□□□ -0.16
TRIM28-207ENST00000597136 ING2Q9H160 280 aa14.05□□□□□ -0.16
TRIM28-207ENST00000597136 CLMPQ9H6B4 373 aa14.05□□□□□ -0.16
TRIM28-207ENST00000597136 MS4A12Q9NXJ0 267 aa14.05□□□□□ -0.16
TRIM28-207ENST00000597136 MAPRE3Q9UPY8 281 aa14.05□□□□□ -0.16
TRIM28-207ENST00000597136 CLDN16Q9Y5I7 305 aa14.05□□□□□ -0.16
TRIM28-207ENST00000597136 FAM234BA2RU67 622 aa14.05□□□□□ -0.16
TRIM28-207ENST00000597136 GABRR3A8MPY1 467 aa14.05□□□□□ -0.16
TRIM28-207ENST00000597136 SCAMP2O15127 329 aaKnown RBP14.05□□□□□ -0.16
TRIM28-207ENST00000597136 AIFM1O95831 613 aa14.05□□□□□ -0.16
TRIM28-207ENST00000597136 FAM87AP0C7U9 286 aa14.05□□□□□ -0.16
TRIM28-207ENST00000597136 C8orf89P0DMQ9 161 aa14.05□□□□□ -0.16
TRIM28-207ENST00000597136 DRD2P14416 443 aa14.05□□□□□ -0.16
TRIM28-207ENST00000597136 DDCP20711 480 aa14.05□□□□□ -0.16
TRIM28-207ENST00000597136 HPCAL1P37235 193 aa14.05□□□□□ -0.16
TRIM28-207ENST00000597136 CCL11P51671 97 aa14.05□□□□□ -0.16
TRIM28-207ENST00000597136 POLR2JP52435 117 aaKnown RBP14.05□□□□□ -0.16
TRIM28-207ENST00000597136 Q0VFX4 171 aa14.05□□□□□ -0.16
TRIM28-207ENST00000597136 HEPACAMQ14CZ8 416 aa14.05□□□□□ -0.16
TRIM28-207ENST00000597136 BLOC1S3Q6QNY0 202 aa14.05□□□□□ -0.16
TRIM28-207ENST00000597136 MED25Q71SY5 747 aa14.05□□□□□ -0.16
TRIM28-207ENST00000597136 ANKRD37Q7Z713 158 aa14.05□□□□□ -0.16
TRIM28-207ENST00000597136 EXD3Q8N9H8 876 aa14.05□□□□□ -0.16
TRIM28-207ENST00000597136 GLB1L3Q8NCI6 653 aaPredicted RBP14.05□□□□□ -0.16
TRIM28-207ENST00000597136 OR7A2PQ8NGA2 310 aa14.05□□□□□ -0.16
TRIM28-207ENST00000597136 APOBEC4Q8WW27 367 aaKnown RBP14.05□□□□□ -0.16
TRIM28-207ENST00000597136 TESCQ96BS2 214 aa14.05□□□□□ -0.16
TRIM28-207ENST00000597136 FAIM2Q9BWQ8 316 aa14.05□□□□□ -0.16
TRIM28-207ENST00000597136 REEP4Q9H6H4 257 aa14.05□□□□□ -0.16
TRIM28-207ENST00000597136 ATP6V1HQ9UI12 483 aa14.05□□□□□ -0.16
TRIM28-207ENST00000597136 PCDHA9Q9Y5H5 950 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms